Gene name Source Gene ID Annotation Date Added by
AC3.7 Aff_AC3.7 P W All gene names: dod-15; ugt-1; AC3.7; 5K877; CE05137;
NM_073270; WBGene00007072; WP:CE05137
WormBase description: UDP-glucuronosyltransferase
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, Murphy et al 2003 Fig2 Class1
elongate lifespan, ReichertK et al 2005 T1 xenobiotic
induced UDP-gl, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, GO categories, Reinke et al
2004, list of genes in cluster B, ViswanathanM et al
2005 S2 sir-2.1 regulated
AFF_C23H3.4 Aff_C23H3.4 P W
AFF_C45E1.4 Aff_C45E1.4 P W
AFF_F20D12.5 Aff_F20D12.5 P W
AFF_F21H12.1 Aff_F21H12.1 P W
AFF_F23F12.2 Aff_F23F12.2 P W
AFF_F28B3.6 Aff_F28B3.6 P W
AFF_F39D8.2 Aff_F39D8.2 P W
AFF_F43C11_37.B Aff_F43C11_37.B P W
AFF_F44B9.8 Aff_F44B9.8 P W
AFF_H24O09.C Aff_H24O09.C P W
AFF_R11D1.9 Aff_R11D1.9 P W
AFF_W09G12.3 Aff_W09G12.3 P W
AFF_Y105E8A.P Aff_Y105E8A.P P W
AFF_Y116A8A.LL Aff_Y116A8A.LL P W
AFF_Y116F11.ZZ17 Aff_Y116F11.ZZ17 P W
AFF_Y25C1A.A Aff_Y25C1A.A P W
AFF_Y45F10A.3 Aff_Y45F10A.3 P W
AFF_Y46B2_176.B Aff_Y46B2_176.B P W
AFF_Y55B1B_119.G Aff_Y55B1B_119.G P W
AFF_Y59A8A.U Aff_Y59A8A.U P W
AFF_Y71A12B.A Aff_Y71A12B.A P W
AFF_Y75B8A.U Aff_Y75B8A.U P W
AFF_Y77E11A_3443.Q Aff_Y77E11A_3443.Q P W
AFF_ZK783.4 Aff_ZK783.4 P W
B0205.6 Aff_B0205.6 P W All gene names: B0205.6; 1L315; CE30405;
WBGene00015021; WP:CE30405
WormBase description: aminotransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
B0280.8 Aff_B0280.8 P W All gene names: nhr-10; B0280.8; 3I202; CE00815;
NM_066153; WBGene00003609; WP:CE00815
WormBase description: nhr-10 encodes a predicted
nuclear hormone receptor diverged from nuclear hormone
receptors in other phyla; its mRNA is expressed
throughout development with possibly lower expression
from the L4 larval to adult stages, and the protein is
expressed in neuronal processes.
WormBase CDS description: retinoic acid
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0303.7 Aff_B0303.7 P W All gene names: B0303.7; 3J787; CE36521;
WBGene00015128; WP:CE36521
WormBase description: Neutrophil oxidase factor
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
B0336.4 Aff_B0336.4 P W All gene names: rgs-5; B0336.4; 3G791; CE32098;
NM_065828; WBGene00004348; WBGene00015144; WP:CE32098
WormBase description: rgs-5 encodes a regulator of G
protein signaling; by homology, RGS-5 is predicted to
function as a GTPase-activating protein that binds G
protein alpha subunits and negatively regulates
heterotrimeric G protein signaling; loss of rgs-5
activity via RNAi or a deletion mutation results in no
obvious defects, and likewise, rgs-5 overexpression has
no measurable effect on egg-laying behavior,
locomotion, or viability; an rgs-5 transcriptional
reporter is expressed in head neurons in larvae and
adults.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Climbing, Wang et al 2003 S4 genes pass
two-wayANOVA P0
B0432.10 Aff_B0432.10 P W All gene names: B0432.10; 2A574; CE07748;
WBGene00015191; WP:CE07748
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0432.3 Aff_B0432.3 P W All gene names: B0432.3; 2A579; CE07741;
WBGene00015185; WP:CE07741
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0454.9 Aff_B0454.9 P W All gene names: B0454.9; 2D344; CE07759;
WBGene00015200; WP:CE07759
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma
B0491.1 Aff_B0491.1 P W All gene names: B0491.1; 2L639; CE02103;
WBGene00007189; WP:CE02103
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0547.1 Aff_B0547.1 P W All gene names: csn-5; B0547.1; B0547.1.1; B0547.1.2;
4G415; CE06722; NM_068440; WBGene00000817; WP:CE06722
WormBase description: csn-5 encodes an ortholog of
subunit 5 of the COP9 signalosome complex (CSN5), which
in turn is a pan-eukaryotic multiprotein complex that
positively regulates E3 ubiquitin ligases, physically
interacts with SCF-type E3 ubiquitin ligases, and
probably regulates protein degradation; CSN-5 (along
with KGB-1 and ZYX-1) physically binds germline RNA
helicases (GLH proteins), and csn-5(RNAi) results in
sterile worms with small gonads and no oocytes, causing
oogenesis to cease, but not affecting the initial
assembly of P granules -- a defect essentially
identical to that produced by RNAi with a combination
of glh-1 and glh-4.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
C01B12.8 Aff_C01B12.8 P W All gene names: C01B12.8; CE07796; NM_061235;
WBGene00015291; WP:CE07796
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, GO categories
C01G10.9 Aff_C01G10.9 P W All gene names: C01G10.9; 5P563; CE07818;
WBGene00007236; WP:CE07818
WormBase description: Initiation factor 2 subunit
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al
2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Early
genes, Wang et al 2003 S3 genes pass one-way ANOVA,
Wang et al 2003 S4 genes pass two-wayANOVA P0
C01G6.2 Aff_C01G6.2 P W All gene names: C01G6.2; 2J557; CE02958;
WBGene00007224; WP:CE02958
Member of lists (Publications lists):
Reinke et al 2004, herm sperm, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, spermatogenesis enriched genes, Reinke et al
2004, wt herm vs wt herm enriched gen, Reinke et al
2004, fem3 enriched genes, Reinke et al 2004, IVb male
soma enriched genes, Reinke et al 2004, wt vs glp-4
enriched genes, Reinke et al 2004, list of genes in
cluster D, ViswanathanM et al 2005 S2 sir-2.1
regulated
C01G6.4 Aff_C01G6.4 P W All gene names: C01G6.4; 2J562; CE00866;
WBGene00007226; WP:CE00866
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C02B10.4 Aff_C02B10.4 P W All gene names: C02B10.4; C02B10.4.1; C02B10.4.2;
4F857; CE16801; WBGene00015329; WP:CE16801
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated
C03B1.7 Aff_C03B1.7 P W All gene names: C03B1.7; CE03909; WBGene00015378;
WP:CE03909; XG963
C03D6.4 Aff_C03D6.4 P W All gene names: npp-14; C03D6.4; 1K238; CE05198;
CeNup214; NM_060167; WBGene00003800; WP:CE05198
WormBase description: npp-14 is orthologous to the
human gene NUCLEOPORIN, 214-KD (NUP214; OMIM:114350),
which encodes part of the nucleopore complex mediating
nucleocytoplasmic transport; NUP214, as a fusion gene
with DEK (OMIM:125264), is found in a subset of acute
myeloid leukemia.
WormBase CDS description: nucleoporin
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, ViswanathanM et al
2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005
S2 sir-2.1 regulated
C04F5.9 Aff_C04F5.9 P W All gene names: C04F5.9; 5F594; CE19673;
WBGene00015451; WP:CE19673
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C05C8.2 Aff_C05C8.2 P W All gene names: C05C8.2; 5H713; CE07920;
WBGene00015461; WP:CE07920
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C05D10.1 Aff_C05D10.1 P W All gene names: C05D10.1; C05D10.1a.1; C05D10.1a.2;
C05D10.1c.1; C05D10.1c.2; C05D10.1c.3; C05D10.1c.4;
3H173; CE24783; CE30420; CE37698; WBGene00015477;
WP:CE24783; WP:CE30420; WP:CE37698
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C05D10.3 Aff_C05D10.3 P W All gene names: C05D10.3; 3H174; CE29170;
WBGene00015479; WP:CE29170
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C05D11.9 Aff_C05D11.9 P W All gene names: C05D11.9; 3H518; CE24787;
WBGene00015486; WP:CE24787
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Romagnolo et
al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2
sir-2.1 regulated
C05D9.7 Aff_C05D9.7 P W All gene names: C05D9.7; CE07933; WBGene00015474;
WP:CE07933; XB736
C05E4.9 Aff_H24O09.A P W All gene names: gei-7; C05E4.9; C05E4.9a.1; C05E4.9a.2;
C05E4.9a.3; C05E4.9b.1; C05E4.9b.2; 5B204; CE23521;
CE32565; NM_070905; WBGene00001564; WP:CE23521;
WP:CE32565
WormBase description: gei-7 encodes a predicted
isocitrate lyase/malate synthase, an enzyme known to
function in the glyoxylate cycle; GEI-7 was identified
in a screen for proteins that interact with GEX-3, a
homolog of human HEM-2 which is required for embryonic
development; GEI-7 is required for embryonic
morphogenesis and appears to act downstream of DAF-16
to influence lifespan.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Murphy et al 2003 Fig2 Class1 elongate
lifespan, ViswanathanM et al 2005 S2 sir-2.1 regulated
C05G5.2 Aff_C05G5.2 P W All gene names: C05G5.2; CE05225; WBGene00007348;
WP:CE05225; XP367
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C06A1.5 Aff_C06A1.5 P W All gene names: C06A1.5; 2K871; CE02117;
WBGene00007355; WP:CE02117
WormBase description: DNA directed RNA polymerase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated
C06A5.5 Aff_C06A5.5 P W All gene names: C06A5.5; 1G558; CE07952;
WBGene00015503; WP:CE07952
WormBase description: RNA-binding protein
C06G1.4 Aff_C06G1.4 P W All gene names: ain-1; C06G1.4; C06G1.4.1; C06G1.4.2;
CE03967; WBGene00015547; WP:CE03967; XR231
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
C07A12.3 Aff_C07A12.3 P W All gene names: nhr-35; C07A12.3; CE30855; CE38483;
NM_076378; WBGene00003628; WP:CE30855; WP:CE38483;
XF155
WormBase description: zinc finger protein
C08A9.6 Aff_C08A9.6 P W All gene names: C08A9.6; CE06788; WBGene00015586;
WP:CE06788; XR708
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C08B11.7 Aff_C08B11.7 P W All gene names: ubh-4; C08B11.7; 2I328; CE36913;
NM_063283; WBGene00006724; WP:CE36913
WormBase description: thiolesterase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
C09G5.4 Aff_C09G5.4 P W All gene names: col-39; C09G5.4; 2K995; CE01484;
NM_063908; WBGene00000616; WP:CE01484
WormBase description: col-39 encodes a collagen that is
individually dispensable for viability and gross
morphology in mass RNAi screens; the amino- and
carboxyl-terminal cysteine-rich regions of COL-39 are
most closely related to those of COL-8, COL-19, and
COL-35.
WormBase CDS description: collagen
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, Reinke et al 2004, wt herm vs wt herm
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
C10C5.5 Aff_C10C5.5 P W All gene names: C10C5.5; 4K147; CE36099;
WBGene00007509; WP:CE36099
WormBase description: aminoacylase-1
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, GO categories, Reinke et
al 2004, IVb male soma enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C10E2.4 Aff_C10E2.4 P W All gene names: C10E2.4; CE08063; WBGene00015674;
WP:CE08063; XR360
C10F3.5 Aff_C10F3.5 P W All gene names: pcm-1; C10F3.5; 5G442; CE08070;
NM_072150; WBGene00003954; WP:CE08070
WormBase description: L-isoaspartyl/D-aspartyl
methyltransferase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C13C4.4 Aff_C13C4.4 P W All gene names: C13C4.4; 5M590; CE20504;
WBGene00007548; WP:CE20504
Member of lists (Publications lists):
Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, fem3 enriched genes
C14C10.4 Aff_C14C10.4 P W All gene names: C14C10.4; C14C10.4.1; C14C10.4.2; 5N74;
CE05283; WBGene00007587; WP:CE05283
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, GO categories, Reinke
et al 2004, herm soma enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005
S2 daf-16 Resveratrol
C14F5.1 Aff_C14F5.1 P W All gene names: BCL-2; C14F5.1; CE01780; CE29172;
WBGene00015776; WP:CE01780; WP:CE29172; XI573
C15H11.8 Aff_C15H11.8 P W All gene names: C15H11.8; 5O904; CE08185;
WBGene00007616; WP:CE08185
WormBase description: DNA-directed RNA polymerase I
like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
C15H9.10 Aff_C15H9.10 P W All gene names: C15H9.10; CE06836; WBGene00015804;
WP:CE06836; XG730
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C16A3.3 Aff_C16A3.3 P W All gene names: C16A3.3; 3H477; CE27690; NM_065997;
WBGene00015808; WP:CE27690
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, McCarroll et al 2004 SFig5
conserved w/ yeast, McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C16B8.4 Aff_C16B8.4 P W All gene names: C16B8.4; CE30248; WBGene00015824;
WP:CE30248; XE590
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C17G10.1 Aff_C17G10.1 P W All gene names: C17G10.1; C17G10.1.1; C17G10.1.2;
2F887; CE01785; WBGene00015915; WP:CE01785
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, GO
categories, Reinke et al 2004, list of genes in cluster
E, ViswanathanM et al 2005 S2 sir-2.1 regulated
C18A11.7 Aff_C18A11.7 P W All gene names: dim-1; C18A11.7; C18A11.7b.1;
C18A11.7b.2; C18A11.7b.3; C18A11.7b.4; CE04038;
CE27706; WBGene00001000; WP:CE04038; WP:CE27706; XI670
Member of lists (Publications lists):
Link et al 2003 T2 Abeta repressed,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, list of genes in cluster C
C18A3.5 Aff_C18A3.5 P W All gene names: C18A3.5; C18A3.5e.1; C18A3.5e.2;
C18A3.5f.1; C18A3.5f.2; C18A3.5f.3; C18A3.5f.4;
C18A3.5f.5; 2G2; CE27708; CE27709; CE27710; CE32130;
CE32131; WBGene00015943; WP:CE27708; WP:CE27709;
WP:CE27710; WP:CE32130; WP:CE32131
WormBase description: RNA binding protein
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma
C18A3.8 Aff_C18A3.8 P W All gene names: hlh-14; C18A3.8; 2G28; CE36629;
NM_062730; WBGene00001958; WP:CE36629
WormBase description: hlh-14 encodes a basic
helix-loop-helix (bHLH) transcription factor that is
one of five C. elegans Achaete-Scute family homologs;
HLH-14 activity is required generally for normal
egg-laying, movement, body morphology, and larval
development; more specifically, HLH-14 is required for
proper neuronal development, particularly for
regulation of the asymmetric cell division that gives
rise to the PVQ/HSN/PHB neuroblasts and for normal
differentiation of these neuroblast descendants,
including their cell division patterns, migrations, and
neurotransmitter expression; in specifying neuronal
cell fates, genetic evidence suggests that hlh-14 acts
together with hlh-2, which encodes the C. elegans
E/Daughterless ortholog; HLH-14 is expresed exclusively
in the embryo and detected in the left and right
PVQ/HSN/PHB neuroblasts and their descendants, as well
as in other cells identified, tentatively, as anterior
neuroblasts and posterior neuroblasts such as Caapa.
WormBase CDS description: helix-loop-helix
transcription factor
C18B12.6 Aff_C18B12.6 P W All gene names: C18B12.6; CE32590; WBGene00007668;
WP:CE32590; XP624
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C18D11.2 Aff_C18D11.2 P W All gene names: maa-1; C18D11.2; 3M910; CE18513;
NM_067130; WBGene00007680; WP:CE18513
WormBase description: maa-1 encodes a predicted
membrane-associated Acyl-CoA binding protein; loss of
maa-1 activity via RNAi results in no obvious defects.
WormBase CDS description: Acyl CoA binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster A, Reinke et al 2004, list of genes in
cluster order, ViswanathanM et al 2005 S2 sir-2.1
regulated
C18H7.3 Aff_C18H7.3 P W All gene names: col-102; C18H7.3; 4B353; CE17428;
NM_067556; WBGene00000676; WP:CE17428
WormBase description: cuticular collagen
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b Cell
Structure, ViswanathanM et al 2005 S2 sir-2.1
regulated
C18H9.3 Aff_C18H9.3 P W All gene names: C18H9.3; 2G981; CE01803;
WBGene00016002; WP:CE01803
C23G10.3 Aff_C23G10.3 P W All gene names: rps-3; C23G10.3; C23G10.3.1;
C23G10.3.2; 3H297; CE01810; NM_065948; WBGene00004472;
WP:CE01810
WormBase description: rps-3 encodes a small ribosomal
subunit S3 protein that contains a KH RNA-binding
domain and by homology,is predicted to function in
protein biosynthesis; in C. elegans, RPS-3 activity is
required for embryonic and germline development, as
well as the overall health of the animal.
WormBase CDS description: Ribosomal protein S3
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C25A1.13 Aff_C25A1.13 P W All gene names: C25A1.13; 1K769; CE08379;
WBGene00007712; WP:CE08379
WormBase description: NADH-ubiquinone oxidoreductase B8
subunit
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C26E6.6 Aff_C26E6.6 P W All gene names: C26E6.6; C26E6.6.1; C26E6.6.2; 3G25;
CE39477; WBGene00016142; WP:CE39477
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: Ribosomal protein L3
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C27D8.3 Aff_C27D8.3 P W All gene names: C27D8.3; 4N472; CE08422; CE39679;
WBGene00007779; WP:CE08422; WP:CE39679
WormBase description: The C27D8.3 gene encodes a
protein that may be involved in apoptosis.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C27F2.8 Aff_C27F2.8 P W All gene names: C27F2.8; 3G82; CE39000; WBGene00016170;
WP:CE39000
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C27H6.4 Aff_C27H6.4 P W All gene names: C27H6.4; 5K464; CE08428; CE31322;
WBGene00007786; WP:CE08428; WP:CE31322
C29F9.7 Aff_C29F9.7 P W All gene names: pat-4; C29F9.7; C29F9.7.1; C29F9.7.2;
3A708; CE19706; NM_064738; WBGene00003931; WP:CE19706
WormBase description: The pat-4 gene encodes a
serine/threonine kinase orthologous to human
integrin-linked kinase (ILK, OMIM:602366) and is
required for formation of integrin-mediated muscle cell
attachments during embryogenesis; PAT-4 probably
functions as an adaptor molecule and localizes to dense
bodies and M lines; PAT-4 forms a ternary complex with
PAT-6/actopaxin and UNC-112, and requires UNC-112,
UNC-52/perlecan, PAT-2/alpha integrin, and PAT-3/beta
integrin for proper localization to newly forming
integrin adhesion complexes.
WormBase CDS description: integrin-linked kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C, Roy et al 2002 S2 positivecontrol L1 muscle
C31H2.4 Aff_C31H2.4 P W All gene names: C31H2.4; CE04132; WBGene00016294;
WP:CE04132; XF772
WormBase description: C31H2.4 is orthologous to human
4-HYDROXYPHENYLPYRUVATE DIOXYGENASE (HPD; OMIM:276710),
which when mutated leads to tyrosinemia type III;
C31H2.4 is somewhat less similar to human HPD than C.
elegans HPD-1 (to which C31H2.4 is paralogous).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated
C32D5.9 Aff_C32D5.9 P W All gene names: lgg-1; C32D5.9; C32D5.9.1; C32D5.9.2;
2G636; CE01849; NM_062876; WBGene00002980; WP:CE01849
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster A,
Reinke et al 2004, list of genes in cluster order,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C32E8.2 Aff_C32E8.2 P W All gene names: rpl-13; C32E8.2; C32E8.2a.1;
C32E8.2a.2; C32E8.2a.3; C32E8.2b.1; C32E8.2b.2; 1E357;
CE08526; CE33562; WBGene00004425; WP:CE08526;
WP:CE33562
WormBase description: rpl-13 encodes a large ribosomal
subunit L13 protein.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C33H5.15 Aff_C33H5.15 P W All gene names: sgo-1; C33H5.15; 4I560; CE34732;
NM_068889; WBGene00016381; WP:CE34732
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C34E7.4 Aff_C34E7.4 P W All gene names: C34E7.4; CE03061; WBGene00007934;
WP:CE03061; XN552
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C34G6.4 Aff_C34G6.4 P W All gene names: pgp-2; C34G6.4; 1G471; CE29212;
NM_059306; WBGene00003996; WP:CE29212
WormBase description: pgp-2 encodes a member of the ABC
transporter family with highest similarity to the
vertebrate MDR (multidrug resistance) family, and is
orthologous to human MDR1 (ABCB1; OMIM:171050, mutated
in Crohn disease); PGP-2 is expressed at lower levels
during the embryonic stages with higher expression
later in development.
WormBase CDS description: abc transporter
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C
C34G6.6 Aff_C34G6.6 P W All gene names: noah-1; C34G6.6; C34G6.6a.1;
C34G6.6a.2; 1G452; CE29699; CE30432; WBGene00016422;
WP:CE29699; WP:CE30432
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al
2003 S4 genes pass two-wayANOVA P0
C35D10.9 Aff_C35D10.9 P W All gene names: ced-4; C35D10.9; 3F943; CE01203;
CE38154; WBGene00000418; WP:CE01203; WP:CE38154
WormBase description: ced-4 encodes a novel protein;
along with CED-3, CED-4 is required for the initiation
of programmed cell death; accordingly, genetic analyses
indicate that ced-3 and ced-4 function upstream of
ced-1, ced-2, and nuc-1 in the programmed cell death
pathway; in yeast two-hybrid experiments, and upon
coexpression in mammalian cells, CED-4 interacts with
CED-9, an anti-apoptotic BCL-2 homolog; coexpression of
CED-4 and CED-9 results in redistribution of CED-4 from
the cytosol to organellar membranes, suggesting that
CED-9 may negatively regulate CED-4 activity by
sequestering CED-4 to intracellular membranes.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C37A2.5 Aff_F08B6.A P W All gene names: pqn-21; C37A2.5; 1H350; CE27748;
CE32818; WBGene00004111; WP:CE27748; WP:CE32818
WormBase description: The protein product of this gene
is predicted to contain a glutamine/asparagine
(Q/N)-rich ('prion') domain, by the algorithm of
Michelitsch and Weissman (as of the WS77 release of
WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C37E2.4 Aff_C37E2.4 P W All gene names: ceh-36; C37E2.4; CE08623; NM_077964;
WBGene00000457; WP:CE08623; XO802
WormBase description: ceh-36 encodes a paired-like
homeodomain transcription factor that is one of three
orthodenticle (OTD)-like homeodomain proteins in C.
elegans (the others being ttx-1 and ceh-37); CEH-36 is
required broadly for specification of the AWC olfactory
neuron and also for establishing the left-right
asymmetry of the ASEL and ASER gustatory neurons; in
addition, CEH-36 is sufficient to specify the AFD
thermosensory neuron fate in some cell types; CEH-36 is
expressed in the AWC and ASE chemosensory neurons.
WormBase CDS description: Homeobox domain
C39E6.4 Aff_C39E6.3 P W All gene names: mls-2; C39E6.4; CE30891; NM_076414;
WBGene00003377; WP:CE30891; XF378
C39F7.2 Aff_C39F7.2, Aff_Y50D4A_25.A P W All gene names: C39F7.2; C39F7.2.1; C39F7.2.2; 5B704;
CE27581; WBGene00016539; WP:CE27581
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C40A11.2 Aff_C40A11.2 P W All gene names: C40A11.2; C40A11.2.1; C40A11.2.2;
2C437; CE34742; WBGene00016545; WP:CE34742
C40A11.3 Aff_C40A11.3 P W All gene names: C40A11.3; 2C433; CE19366;
WBGene00016546; WP:CE19366
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, ViswanathanM et al 2005 S2 sir-2.1 regulated
C41A3.1 Aff_C41A3.1 P W All gene names: C41A3.1; CE04187; WBGene00016558;
WP:CE04187; XG59
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: polyketide synthase
C41C4.8 Aff_C41C4.8 P W All gene names: cdc-48.2; C41C4.8; C41C4.8.1;
C41C4.8.2; C41C4.8.3; 2I431; CE05402; NM_063304;
WBGene00008053; WP:CE05402
WormBase description: P97 protein
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C41D11.2 Aff_C41D11.2 P W All gene names: eif-3.H; C41D11.2; 1F13; CE29220;
NM_058969; WBGene00001231; WP:CE29220
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, male germline,
Reinke et al 2004, wt males vs glp4 male enriched ,
Wang et al 2003 S4 Early genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
C41H7.1 Aff_C41H7.1 P W All gene names: C41H7.1; 2D307; CE32605;
WBGene00016571; WP:CE32605
C43E11.9 Aff_C43E11.9 P W All gene names: C43E11.9; C43E11.9.1; C43E11.9.2;
1E836; CE08687; WBGene00016607; WP:CE08687
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0
C43H8.1 Aff_C43H8.1 P W All gene names: C43H8.1; C43H8.1.1; C43H8.1.2; 1L201;
CE19377; WBGene00016621; WP:CE19377
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C45B11.1 Aff_C45B11.1 P W All gene names: pak-4; tag-66; C45B11.1; 5L518;
CE05425; CE20564; WBGene00006443; WP:CE05425;
WP:CE20564
WormBase description: P21-Rho-binding domain ;
Eukaryotic protein kinase domain
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, ViswanathanM
et al 2005 S2 sir-2.1 regulated
C45E1.1 Aff_C45E1.1 P W All gene names: nhr-64; C45E1.1; 1D677; CE39696;
CE39697; WBGene00003654; WP:CE39696; WP:CE39697
WormBase description: nhr-64 encodes a conserved
nuclear receptor that is a member of the NR2 subfamily
of nuclear receptors that contains Drosophila and human
HNF4 (OMIM:600281, mutations in human HNF4A are
associated with Type I MODY (maturity-onset diabetes of
the young)); by homology, NHR-64 is predicted to
function as a transcription factor that may activate or
repress transcription in response to a hormonal signal;
however, as loss of nhr-64 activity via RNAi does not
result in any obvious abnormalities, the precise role
of NHR-64 in C. elegans development and/or behavior is
not yet known; nhr-64 is broadly expressed and detected
in anterior and posterior neurons, the ventral nerve
cord, the pharynx, gut, and hypodermis.
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S8 SAGE genes in the dauer exit
C45E5.6 Aff_C45E5.6 P W All gene names: nhr-46; C45E5.6; C45E5.6a.1;
C45E5.6a.2; C45E5.6c.1; C45E5.6c.2; C45E5.6c.3;
C45E5.6c.4; C45E5.6c.5; C45E5.6c.6; C45E5.6c.7;
C45E5.6c.8; 4G512; CE08734; CE29226; CE29227;
NM_068457; WBGene00003636; WP:CE08734; WP:CE29226;
WP:CE29227
WormBase description: nuclear hormone receptor
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
C46C11.2 Aff_C46C11.2 P W All gene names: C46C11.2; CE39005; CE39006;
WBGene00016705; WP:CE39005; WP:CE39006; XF253
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C46H11.9 Aff_C46H11.9 P W All gene names: phat-2; C46H11.9; 1F614; CE08791;
WBGene00016733; WP:CE08791
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C46H3.2 Aff_C46H3.2 P W All gene names: C46H3.2; C46H3.2b.1; C46H3.2b.2;
CE29228; CE33921; WBGene00016725; WP:CE29228;
WP:CE33921; XB832
WormBase description: tyrosine-protein kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C47C12.3 Aff_C47C12.3 P W All gene names: C47C12.3; C47C12.3a.1; C47C12.3a.2;
CE33037; CE35437; NM_076907; WBGene00004335;
WP:CE33037; WP:CE35437; XI361
WormBase description: ref-2 is orthologous to the human
gene ZINC FINGER PROTEIN OF CEREBELLUM ZIC2 (ZIC2;
OMIM:603073), which when mutated leads to disease.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C47E8.7 Aff_C47E8.7 P W All gene names: unc-112; C47E8.7; C47E8.7.1; C47E8.7.2;
5P172; CE05443; NM_074227; WBGene00006836; WP:CE05443
WormBase description: The unc-112 gene encodes a
pleckstrin homology domain-containing protein,
orthologous to human Mitogen inducible gene-2, that is
required for assembly of muscle dense bodies and M
lines during embryogenesis; UNC-112 is a dense
body/M-line component and requires PAT-3/beta-integrin,
UNC-52/perlecan, and PAT-4/integrin-linked kinase for
proper localization; UNC-112 binds PAT-4 directly,
forms a ternary complex with PAT-4 and PAT-6/actopaxin,
and is required for recruitment of PAT-3 and PAT-4 to
muscle cell attachment sites; viable unc-112 mutations
are suppressed by mutation of dim-1.
WormBase CDS description: mitogen inducible MIG-2
protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C
C48B6.2 Aff_C48B6.2 P W All gene names: C48B6.2; C48B6.2.1; C48B6.2.2; 1H493;
CE08804; WBGene00016740; WP:CE08804
WormBase description: ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C48B6.9 Aff_C48B6.9 P W All gene names: C48B6.9; 1H502; CE08811;
WBGene00016745; WP:CE08811
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C48D1.1 Aff_C48D1.1 P W All gene names: C48D1.1; 4N958; CE32833; CE39701;
WBGene00008177; WP:CE32833; WP:CE39701
WormBase description: C.elegans ZYG-11 like protein
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, herm soma enriched
genes
C49C3.15 Aff_C49C3.15 P W All gene names: C49C3.15; 4S279; CE37493;
WBGene00008204; WP:CE37493
C49C3.8 Aff_C49C3.8 P W All gene names: C49C3.8; 4S281; CE19747;
WBGene00008198; WP:CE19747
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
C49H3.6 Aff_C49H3.6 P W All gene names: C49H3.6; 4I671; CE29380; CE30506;
WBGene00016792; WP:CE29380; WP:CE30506
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, ViswanathanM
et al 2005 S2 sir-2.1 regulated, ViswanathanM et al
2005 S2 daf-16 Resveratrol
C49H3.8 Aff_C49H3.8 P W All gene names: C49H3.8; 4I664; CE04234;
WBGene00016793; WP:CE04234
WormBase description: actin-like protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
C50B6.9 Aff_C50B6.9 P W All gene names: C50B6.9; 5N819; CE08878;
WBGene00008222; WP:CE08878
C52E2.2 Aff_C52E2.H P W All gene names: C52E2.2; C52E2.H; 2C125b; CE20597;
WBGene00016881; WP:CE20597
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
C52E4.2 Aff_C52E4.2 P W All gene names: mif-2; C52E4.2; C52E4.2.1; C52E4.2.2;
5M458; CE08944; NM_073602; WBGene00003235; WP:CE08944
WormBase description: macrophage migration inhibitory
factor like protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C52E4.3 Aff_C52E4.3 P W All gene names: snr-4; C52E4.3; C52E4.3.1; C52E4.3.2;
5M460; CE08945; NM_073603; WBGene00004917; WP:CE08945
WormBase description: small nuclear ribonucleoprotein
D2 like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, GO
categories
C53C11.4 Aff_C53C11.4 P W All gene names: C53C11.4; CE04267; WBGene00016901;
WP:CE04267; XR923
WormBase description: S. muris microneme antigen
C55B6.2 Aff_C55B6.2 P W All gene names: dnj-7; C55B6.2; CE09008; NM_076808;
WBGene00001025; WP:CE09008; XH815
WormBase description: This gene encodes a protein
containing a DnaJ ('J') domain that is predicted to be
mitochondrial.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Early genes, Wang et al 2003
S4 genes pass two-wayANOVA P0
C56C10.3 Aff_C56C10.3 P W All gene names: phi-27; tag-309; C56C10.3; C56C10.3.1;
C56C10.3.2; 2G881; CE02568; WBGene00016961; WP:CE02568
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C56G2.15 Aff_C56G2.15 P W All gene names: C56G2.15; 3H456; CE01870;
WBGene00016983; WP:CE01870
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
D1022.1 Aff_D1022.1 P W All gene names: ubc-6; D1022.1; 2H771; CE29241;
CE39712; NM_063165; WBGene00006703; WP:CE29241;
WP:CE39712
WormBase description: Ubiquitin-conjugating enzyme
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
D1025.2 Aff_D1025.2 P W All gene names: D1025.2; CE17610; WBGene00008354;
WP:CE17610; XP132
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
D1069.4 Aff_D1069.4 P W All gene names: D1069.4; 2A642; CE17616;
WBGene00017038; WP:CE17616
D2007.5 Aff_D2007.5 P W All gene names: D2007.5; D2007.5.1; D2007.5.2; 3J246;
CE00130; WBGene00017045; WP:CE00130
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster A, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
D2089.3 Aff_D2089.3 P W All gene names: D2089.3; 2K952; CE00938;
WBGene00008434; WP:CE00938
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
E03A3.3 Aff_E03A3.3 P W All gene names: his-69; E03A3.3; 3F148; CE00942;
NM_065410; WBGene00001943; WP:CE00942
WormBase description: his-69 encodes a truncated H3
histone.
WormBase CDS description: histone H3
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
E03E2.1 Aff_E03E2.1 P W All gene names: cyp-43A1; E03E2.1; E03E2.1.1;
E03E2.1.2; CE29747; NM_076560; WBGene00017108;
WP:CE29747; XG335
WormBase description: cytochrome P450
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
E04A4.8 Aff_E04A4.8, Aff_Y17G9B.E P W All gene names: rpl-20; E04A4.8; E04A4.8.1; E04A4.8.2;
4F516; CE21392; NM_068229; WBGene00004432; WP:CE21392
WormBase description: rpl-20 encodes a large ribosomal
subunit L18a protein.
WormBase CDS description: ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
EEED8.2 Aff_EEED8.2 P W All gene names: EEED8.2; 2F707; CE01886;
WBGene00017133; WP:CE01886
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 daf-16 Resveratrol
EEED8.8 Aff_EEED8.8 P W All gene names: ndx-6; EEED8.8; 2F680; CE27911;
NM_062614; WBGene00003583; WP:CE27911
WormBase description: The ndx-6 gene encodes a NUDIX
hydrolase.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F01G10.8 Aff_F01G10.8 P W All gene names: daf-14; F01G10.8; 4L19; CE29090;
NM_069479; WBGene00000910; WP:CE29090
WormBase description: daf-14 encodes a Smad-related
protein that is unusual in that while its C-terminus is
well-conserved with Smad proteins, it lacks the
N-terminal DNA binding domain found in all other known
Smads; DAF-14 is predicted to function as a transducer
of the DAF-7/TGF-beta-mediated signal that promotes
reproductive growth and negatively regulates dauer
formation; as reduction of daf-14 function enhances the
dauer constitutive phenotype of daf-8 mutants, and
overexpression of daf-14 can rescue daf-8 mutant
animals, it is likely that the DAF-14 and DAF-8 Smad
proteins function in parallel to control dauer
formation; further genetic analyses suggest that DAF-14
and DAF-8 function to antagonize the activities of the
DAF-3 Smad and DAF-5 Sno/Ski oncoprotein, which are
required for dauer formation; a DAF-14::GFP reporter is
expressed in a dynamic pattern in tissues, such as the
hypodermis, intestine, and pharynx, that are remodeled
during dauer development.
WormBase CDS description: Mouse MSMAD protein like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, Wang et al 2003 S3 genes pass one-way ANOVA,
Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4
genes pass two-wayANOVA P0
F02A9.2 Aff_F02A9.2 P W All gene names: far-1; F02A9.2; F02A9.2.1; F02A9.2.2;
F02A9.2.3; 3K170; CE00133; NM_066609; WBGene00001385;
WP:CE00133
WormBase description: far-1 encodes a fatty
acid/retinol binding protein; expressed throughout
development with highest expression levels in L3 stage
larvae and in adult males.
WormBase CDS description: O. volvulus 20Kd antigenic
peptide
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F02E8.3 Aff_F02E8.3 P W All gene names: aps-2; F02E8.3; CE07018; NM_076366;
WBGene00000157; WP:CE07018; XF77
WormBase description: The aps-2 gene encodes an
adaptin: specifically, it encodes an ortholog of the
sigma2 subunit of adaptor protein complex 2 (AP-2),
which mediates endocytosis from the plasma membrane;
APS-2 appears to be required for embryonic and larval
development and for normal body morphology, but is not
required for endocytosis of yolk protein in developing
oocytes; APS-2 is expressed in nearly all cells during
embryogenesis, but during larval and adult stages,
expression is confined to neurons and some hypodermal
cells, including vulval hypodermal cells during the
fourth larval stage.
WormBase CDS description: Clathrin coat assembly
protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S5 genes common to feeding ANOVA, Wang
et al 2003 S3 genes pass one-way ANOVA
F02E9.7 Aff_F02E9.7 P W All gene names: F02E9.7; 1I991; CE09190;
WBGene00008531; WP:CE09190
WormBase description: acid phosphatase
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F07A11.2 Aff_F07A11.2 P W All gene names: F07A11.2; F07A11.2b.1; F07A11.2b.2;
F07A11.2b.3; 2L884; CE03144; CE27915; WBGene00008546;
WP:CE03144; WP:CE27915
WormBase description: glucosamine-fructose-6-phosphate
aminotransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, IVb male soma enriched genes
F07A5.7 Aff_F07A5.7 P W All gene names: unc-15; F07A5.7; F07A5.7.1; F07A5.7.2;
F07A5.7.3; F07A5.7.4; 1H954; CE09197; NM_059684;
WBGene00006754; WP:CE09197
WormBase description: The unc-15 gene encodes a
paramyosin ortholog; UNC-15 protein physically
interacts with MHC A, one isoform of myosin heavy chain
(MHC) in striated muscle; UNC-15 accumulation is
decreased in the absence of UNC-54 (myosin B), implying
that degradation of UNC-15 is inhibited by its binding
myosin B; conversely, myosin B (but not MYO-3/myosin A)
fails to accumulate in unc-15 mutants.
WormBase CDS description: paramyosin
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C, Reinke et al 2004, IVb male soma enriched
genes, Roy et al 2002 S2 positivecontrol L1 muscle,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F08B12.2 Aff_F08B12.2 P W All gene names: prx-12; F08B12.2; CE03163; NM_077507;
WBGene00004197; WP:CE03163; XM13
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
F08B6.1 Aff_F08B6.F P W All gene names: F08B6.1; F08B6.F; 1H339; CE39717;
WBGene00017239; WP:CE39717
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
F08C6.6 Aff_F08C6.6 P W All gene names: F08C6.6; CE27925; WBGene00017244;
WP:CE27925; XI186
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F08F8.2 Aff_F08F8.2 P W All gene names: F08F8.2; 3I451; CE30649;
WBGene00017268; WP:CE30649
WormBase description: Hydroxymethylglutaryl-coA
reductase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
F08G12.1 Aff_F08G12.1 P W All gene names: F08G12.1; CE03166; WBGene00008585;
WP:CE03166; XL922
WormBase description: ras-related like protein
F09E5.3 Aff_F09E5.3 P W All gene names: F09E5.3; F09E5.3.1; F09E5.3.2; 2F665;
CE02610; WBGene00017283; WP:CE02610
WormBase description: Deoxyribose-phosphate aldolase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
F09E5.8 Aff_F09E5.8 P W All gene names: F09E5.8; 2F641; CE02615;
WBGene00017286; WP:CE02615
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F10C2.2 Aff_F10C2.2 P W All gene names: kup-1; F10C2.2; 5M514; CE09306;
NM_073615; WBGene00002241; WP:CE09306; kup1
WormBase description: kup-1 encodes a novel protein
that is conserved in C. briggsae, but contains no other
known homologs; kup-1 is the upstream gene in an operon
with pkc-1, which encodes two protein kinase C isoforms
of the nPKC isotype; the polycistronic kup-1/pkc-1 mRNA
is detected at low levels in embryos and larvae, but
its expression greatly increases in adults; as loss of
kup-1 activity via large-scale RNAi screens does not
result in any obvious abnormalities, the precise role
of kup-1 in C. elegans development and/or behavior is
not yet known.
WormBase CDS description: KUP-1 protein
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, ViswanathanM
et al 2005 S2 sir-2.1 regulated
F10C2.5 Aff_F10C2.5 P W All gene names: F10C2.5; CE09309; NM_073617;
WBGene00008646; WP:CE09309
WormBase description: mannosyl-oligosaccharide
alpha-1,2-mannosidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma, Reinke et
al 2004, GO categories, Romagnolo et al 2002 Fig3b
Adhesion
F10D7.3 Aff_F10D7.3 P W All gene names: F10D7.3; CE29754; WBGene00017340;
WP:CE29754; XR988
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: glutaredoxin
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 TransientList, Wang et al 2003 S3 genes
pass one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F10E7.1 Aff_F10E7.1 P W All gene names: F10E7.1; 2H419; CE39350;
WBGene00017343; WP:CE39350
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
F10E7.7 Aff_F10E7.7 P W All gene names: rpl-33; F10E7.7; F10E7.7.1; F10E7.7.2;
2H397; CE04362; NM_063067; WBGene00004447; WP:CE04362
WormBase description: rpl-33 encodes a large ribosomal
subunit L35a protein.
WormBase CDS description: 60s ribosomal protein L35A
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Romagnolo et al 2002 Fig3b Protein Synthesis,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F11A3.2 Aff_F11A3.2 P W All gene names: F11A3.2; 5J997; CE05586; CE38501;
WBGene00008670; WP:CE05586; WP:CE38501
WormBase description: guanine nucleotide exchange
factor
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, GO categories, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Early genes, Wang et al 2003
S4 genes pass two-wayANOVA P0
F11E6.3 Aff_F11E6.3 P W All gene names: F11E6.3; F11E6.3.1; F11E6.3.2; 4S414;
CE19783; WBGene00008707; WP:CE19783
F13D12.2 Aff_F13D12.2 P W All gene names: ldh-1; F13D12.2; 2M15; CE02181; LDH;
NM_064102; WBGene00002262; WP:CE02181
WormBase description: ldh-1 is orthologous to the human
gene LACTATE DEHYDROGENASE B (LDHB; OMIM:150100), which
when mutated leads to lactate dehydrogenase-B
deficiency.
WormBase CDS description: L-lactate dehydrogenase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S4 Early genes,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0
F13D12.4 Aff_F13D12.4 P W All gene names: alh-8; F13D12.4; F13D12.4a.1;
F13D12.4a.2; F13D12.4a.3; F13D12.4a.4; 2M21; CE02183;
CE36262; WBGene00000114; WP:CE02183; WP:CE36262
WormBase description: alh-8 is orthologous to the human
gene METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE
(ALDH6A1; OMIM:603178), which when mutated leads to
MMSDH deficiency.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F14F3.2 Aff_F14F3.2 P W All gene names: F14F3.2; CE31478; WBGene00008805;
WP:CE31478; XL145
WormBase description: ankyrin motif
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S4 Early genes,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0
F16B4.8 Aff_F16B4.8 P W All gene names: cdc-25.2; F16B4.8; 5C63; CE19796;
NM_071045; WBGene00000387; WP:CE19796
WormBase description: cdc-25.2 encodes a putative
homolog of Cdc25 phosphatase protein family that
affects germline proliferation.
WormBase CDS description: protein-tyrosine phosphatase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, mixed oogenesis soma, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 daf-16 Resveratrol
F16D3.4 Aff_F16D3.4 P W All gene names: F16D3.4; 1I940; CE09437;
WBGene00008887; WP:CE09437
WormBase description: F16D3.4 encodes an ortholog of
human TUBULIN-SPECIFIC CHAPERONE D (TBCD; OMIM:604649),
also known as tubulin-folding cofactor D; F16D3.4 may
be a ligand and effector of the ARL2 ortholog EVL-20.
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F17C11.8 Aff_F17C11.8 P W All gene names: tag-318; F17C11.8; F17C11.8.1;
F17C11.8.2; 5L440; CE38502; WBGene00008919; WP:CE38502
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F17E9.10 Aff_F17E9.10 P W All gene names: his-32; F17E9.10; 4J99; NM_069006;
WBGene00001906
WormBase description: his-32 encodes an H3 histone; by
homology, HIS-32 is predicted to function as a
nucleosome component required for packaging of DNA into
chromatin; his-32 is a replication-dependent histone
locus that resides in the HIS5 cluster on chromosome
IV.
WormBase CDS description: histone H3
F17H10.1 Aff_F17H10.1 P W All gene names: F17H10.1; CE03226; WBGene00008925;
WP:CE03226; XN725
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F18C5.3 Aff_F18C5.3 P W All gene names: tag-184; F18C5.3; 2G843; CE02652;
WBGene00007050; WBGene00017558; WP:CE02652
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen
F20G4.1 Aff_F20G4.1 P W All gene names: F20G4.1; 1I496; CE34296;
WBGene00008990; WP:CE34296
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F22F7.1 Aff_F22F7.1 P W All gene names: F22F7.1; F22F7.1a.1; F22F7.1a.2; 5C603;
CE17691; CE32871; WBGene00017719; WP:CE17691;
WP:CE32871
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, herm soma
enriched genes, ViswanathanM et al 2005 S2 sir-2.1
regulated
F23C8.4 Aff_F23C8.K P W All gene names: ubxn-1; F23C8.4; F23C8.K; 1D3; CE20713;
WBGene00017733; WP:CE20713
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, list of genes in cluster F, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
F25B4.1 Aff_F25B4.1 P W All gene names: F25B4.1; F25B4.1.1; F25B4.1.2; 5G193;
CE09620; WBGene00017765; WP:CE09620
WormBase description: F25B4.1 is orthologous to the
human gene GLYCINE CLEAVAGE SYSTEM T-PROTEIN (AMT;
OMIM:238310), which when mutated leads to glycine
encephalopathy.
WormBase CDS description: aminomethytransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
Reinke et al 2004, herm soma enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Climbing, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F25B4.8 Aff_F25B4.8 P W All gene names: F25B4.8; 5G170; CE30761; CE30762;
WBGene00017771; WP:CE30761; WP:CE30762
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F25C8.4 Aff_F25C8.4 P W All gene names: F25C8.4; 5V375; CE18637;
WBGene00009106; WP:CE18637
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: AMP-binding enzymes
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F26F4.3 Aff_F26F4.3 P W All gene names: rom-1; F26F4.3; 3F995; CE32392;
NM_065628; WBGene00004400; WP:CE32392
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F26G5.9 Aff_F26G5.9 P W All gene names: tam-1; F26G5.9; 5F438; CE09704;
NM_071934; WBGene00006523; WP:CE09704
WormBase description: tam-1 encodes a broadly expressed
nuclear protein with RING finger, B-box, and
glutamine/asparagine-rich domains that promotes
signalling in the class B synthetic-multivulva gene
pathway (which includes the lin-35/RB gene), and also
promotes the activity of genes in multicopy transgenic
arrays; the normal role of TAM-1's class B activity is
presumably to inhibit RAS pathway activity in vulval
development, while TAM-1's effect on transgenes may be
through changes in the acetylation state of histones in
chromatin.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, mixed oogenesis soma
F26H9.6 Aff_F26H9.6 P W All gene names: CE-RAB5; rab-5; F26H9.6; F26H9.6.1;
F26H9.6.2; 1J885; CE09711; NM_060080; WBGene00004268;
WP:CE09711
WormBase description: rab-5 encodes a rab related
protein of the Ras GTPase superfamily that affects both
the localization of P-granules and of PAR-2, and also
affects embryonic and larval viability and the
cytoplasmic appearance of cells in the early embryo.
WormBase CDS description: RAS-related protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, Reinke et al 2004, GO
categories
F29C4.7 Aff_F29C4.7 P W All gene names: F29C4.7; F29C4.7a.1; F29C4.7a.2;
F29C4.7b.1; F29C4.7b.2; 4A876; CE17724; CE31493;
CE37226; WBGene00017929; WP:CE17724; WP:CE31493;
WP:CE37226
WormBase description: F29C4.7 is orthologous to human
RBM15 (OMIM:606077, mutated in infantile acute
megakaryoblastic leukemia) and Drosophila NITO; F29C4.7
encodes a paralog of DIN-1; like DIN-1, it has
N-terminal RNA recognition motifs (RRMs) and a
C-terminal SID/RD (SMRT interaction domain/repressor)
domain.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
F29F11.1 Aff_F29F11.1 P W All gene names: sqv-4; F29F11.1; F29F11.1.1;
F29F11.1.2; 5L140; CE05767; NM_073329; WBGene00005022;
WP:CE05767
WormBase description: sqv-4 encodes a UDP-glucose
6-dehydrogenase, biochemically active in vitro, that is
required for cytokinesis of one-cell embryos and for
vulval morphogenesis; SQV-4 is orthologous to
Drosophila SUGARLESS, human UGDH (OMIM:603370), and
zebrafish JEKYLL; SQV-4 is expressed in many cell
types, notably oocytes and uterine, seam, pharyngeal,
and spermathecal cells, with expression being prominent
in 14 of the 22 vulval nuclei of late L4 larvae; the
common requirement for SQV-4 in both cytokinesis and
morphogenesis may be to promote filling an
extracellular space with hygroscopic proteoglycans
(either in the eggshell, or underneath the L4 cuticle),
which in turn may cause the space to fill with fluid.
WormBase CDS description: UDP-glucose dehydrogenase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F30A10.6 Aff_F30A10.6 P W All gene names: F30A10.6; 1K67; CE09807;
WBGene00009264; WP:CE09807
WormBase description: Yeast recessive suppressor RSD1
like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F31C3.1 Aff_F31C3.1 P W All gene names: cyn-5; cyp-5; F31C3.1; F31C3.1.1;
F31C3.1.2; 1P632; CE17730; NM_061223; WBGene00000881;
WP:CE17730
WormBase description: cyp-5 encodes a cyclophilin that
is functional in vitro and is predicted to be a
secreted protein that is structurally most similar to
human cyclophilin B; expressed in the intestine.
WormBase CDS description: cyclophillin
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F31C3.5 Aff_F31C3.5 P W All gene names: F31C3.5; 1P647; CE17734;
WBGene00009287; WP:CE17734
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F32A5.6 Aff_F32A5.6 P W All gene names: prx-13; F32A5.6; 2H540; CE28290;
NM_063112; WBGene00004198; WP:CE28290
WormBase description: prx-13 is orthologous to the
human gene PEX13 (OMIM:601789), which when mutated
leads to Zellweger syndrome or neonatal
adrenoleukodystrophy.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
F32A6.4 Aff_F32A6.4 P W All gene names: ags-3.1; ags-3; F32A6.4; CE04472;
CE29783; CE34009; NM_171684; NM_171951; WBGene00000092;
WP:CE04472; WP:CE29783; WP:CE34009; XF910
WormBase description: ags-3 encodes an ortholog of
mammalian AGS3, a receptor independent activator of G
protein signalling, and of Drosophila RAPSYNOID; AGS-3
proteins have four GoLoco motifs; AGS-3 is involved in
polarity and spindle orientation during early
embryogenesis; a region of AGS-3 encompassing three
GoLoco motifs specifically binds GOA-1 in yeast
two-hybrid assays; AGS-3 is expressed in all muscles,
intestine, and weakly in some head and ventral nerve
cord neurons, with subcellular localization in strong
dots.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F32B6.6 Aff_F32B6.6 P W All gene names: msp-77; F32B6.6; 4K659; CE09861;
NM_069380; WBGene00003464; WP:CE09861
WormBase description: msp-77 encodes a protein that
belongs to a family of proteins called the Major Sperm
Proteins (MSPs) that is conserved in nematodes; this
family consists of closely related, small, basic
proteins that make up 15% of sperm protein; this
multigene family consists of over fifty genes,
including many pseudogenes; MSPs are involved in both
extracellular signaling and cytoskeletal functions
during reproduction-MSP antagonizes Eph/ephrin
signaling, in part, by binding VAB-1 Eph receptor
tyrosine kinase on oocytes and sheath cells to promote
oocyte maturation and MAPK activation; MSPs assemble
into fibrous networks that drive movement of the C.
elegans sperm; msp genes are expressed only in late
primary spermatocytes.
WormBase CDS description: major sperm protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, spermatogenesis
enriched genes, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, fem3 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt males vs glp4 male enriched , Reinke et
al 2004, list of genes in cluster D, Reinke et al 2004,
shared sperm
F35E12.3 Aff_F35E12.3 P W All gene names: F35E12.3; 5O205; CE09918;
WBGene00009427; WP:CE09918
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; this gene's
encoded protein also contains an FTH/DUF38 motif, which
may also mediate protein-protein interaction.
WormBase CDS description: Ser/Thr protein phosphatases
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes
F36D4.2 Aff_F36D4.2 P W All gene names: F36D4.2; 5J881; CE07190;
WBGene00018088; WP:CE07190
WormBase description: synbindin TRS23 family
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F36H2.1 Aff_F36H2.1 P W All gene names: tat-5; F36H2.1; 1J812; CE34183;
CE34184; CE39367; WBGene00009498; WP:CE34183;
WP:CE34184; WP:CE39367
WormBase description: E1-E2 ATPase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
F37C12.2 Aff_F37C12.2 P W All gene names: F37C12.2; 3I275; CE00741;
WBGene00018150; WP:CE00741
Member of lists (Publications lists):
Link et al 2003 T2 Abeta induced,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F37H8.1 Aff_F37H8.1 P W All gene names: lir-3; F37H8.1; 2L474; CE15994;
NM_063994; WBGene00003046; WP:CE15994
WormBase description: lir-3 encodes a lin-26-related
protein that shares a unique C2H2 motif together with
lir-1, lir-2 and lin-26; contains a region rich in
acidic residues suggesting that it may be a
transcription factor.
WormBase CDS description: Zinc finger, C2H2 type
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F38A6.1 Aff_F38A6.1 P W All gene names: Ce-fkh-1; fkh-1; pha-4; F38A6.1; 5V229;
CE15998; NM_075605; WBGene00004013; WP:CE15998
WormBase description: Fork head domain, eukaryotic
transcription factors
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
F39G3.3 Aff_F39G3.3 P W All gene names: F39G3.3; 5F211; CE33083;
WBGene00018208; WP:CE33083
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F39H11.3 Aff_F39H11.3 P W All gene names: cdk-8; F39H11.3; 1J281; CE32409;
NM_059956; WBGene00000409; WP:CE32409
WormBase description: cdk-8 encodes a member of the
cyclin-dependent serine/threonine protein kinase family
orthologous to human CDK8 (OMIM:603184) which functions
in transcriptional regulation with the positive
regulatory factor cyclin C, is associated with the RNA
polymerase II holoenzyme, and may regulate
gene-specific activators; CDK-8 also contains a
glutamine/asparagine-rich domain; loss of cdk-8
function via RNA-mediated interference (RNAi) results
in sterility in the injected hermaphrodite, suggesting
that in C. elegans, CDK-8 may play a role in germ-line
development.
WormBase CDS description: serine/threonine kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, mixed oogenesis soma, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, GO
categories, Reinke et al 2004, list of genes in cluster
E, ViswanathanM et al 2005 S2 sir-2.1 regulated
F39H2.4 Aff_F39H2.4 P W All gene names: syp-3; F39H2.4; 1J240; CE17814;
NM_059944; WBGene00006377; WP:CE17814
Member of lists (Publications lists):
Reinke et al 2004, Fig2b shared
gemlines, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F40E10.6 Aff_F40E10.6 P W All gene names: F40E10.6; F40E10.6.1; F40E10.6.2;
F40E10.6.3; CE31508; WBGene00009574; WP:CE31508; XP322
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F40F4.4 Aff_F40F4.4 P W All gene names: lbp-3; F40F4.4; CE30130; CE39932;
NM_076155; WBGene00002255; WP:CE30130; WP:CE39932;
XD877
Member of lists (Publications lists):
Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, fem3 enriched genes, Roy et al 2002
S3 muscle genes, ViswanathanM et al 2005 S2 sir-2.1
regulated
F40F9.7 Aff_F40F9.7 P W All gene names: F40F9.7; F40F9.7a.1; F40F9.7a.2;
F40F9.7b.1; F40F9.7b.2; F40F9.7b.3; F40F9.7b.4; 5K213;
CE05856; CE33580; WBGene00009584; WP:CE05856;
WP:CE33580
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
F41E6.9 Aff_F41E6.9 P W All gene names: F41E6.9; 5J86; CE10260; WBGene00018290;
WP:CE10260
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F42A9.2 Aff_F42A9.2 P W All gene names: lin-49; F42A9.2; 4J389; CE07224;
NM_069074; WBGene00003034; WP:CE07224
WormBase description: zinc-finger protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F42G8.11 Aff_F42G8.11 P W All gene names: sph-1; F42G8.11; 4I896; CE17070;
NM_068959; WBGene00004979; WP:CE17070
WormBase description: sph-1 encodes a member of the
synaptophysin/synaptoporin family that contains a
MARVEL domain, a membrane-associating domain found in
lipid-associating proteins, and contains a
transmembrane domain.
WormBase CDS description: synaptic vesicle channel
protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F42H11.2 Aff_F42H11.2 P W All gene names: lem-3; F42H11.2; F42H11.2.1;
F42H11.2.2; 1K156; CE10332; NM_060138; WBGene00002276;
WP:CE10332
WormBase description: ankyrin domain
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F43G6.1 Aff_F43G6.1 P W All gene names: dna-2; F43G6.1; 2M71; CE02219; CE23725;
NM_064114; NM_064115; WBGene00001016; WP:CE02219;
WP:CE23725
WormBase description: dna-2 encodes the C. elegans
ortholog of the yeast and vertebrate Dna2 replication
helicases; by homology, DNA-2 is predicted to function
as an endonuclease and an ATP-dependent helicase that
is involved in DNA replication and repair; in C.
elegans, DNA-2 activity is required maternally and
zygotically to maintain normal rates of cell division
and for proper germ-line, embryonic, and larval
development; DNA-2 activity is temperature-sensitive:
animals lacking DNA-2 at 16 degrees Celsius (C) are
less severely affected than those at 20 or 25 degrees
C; in the hermaphrodite gonad, DNA-2 localizes to
nuclei of germ cells and developing oocytes, and
expression continues in embryos up to the comma stage;
DNA-2 then reappears at the L3 larval stage, and in L3
and L4 larvae is visible in the proliferating somatic
cells of the uterus and spermatheca.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F43G6.7 Aff_F43G6.7 P W All gene names: F43G6.7; 2M101; CE02225;
WBGene00009659; WP:CE02225
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F44D12.5 Aff_F44D12.5 P W All gene names: F44D12.5; 4K795; WBGene00009682
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b Unkown,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F44E5.4 Aff_F44E5.4 P W All gene names: F44E5.4; F44E5.4.1; F44E5.4.2; 2M48;
CE18679; WBGene00009691; WP:CE18679
WormBase description: Heat shock hsp70 proteins
Member of lists (Publications lists):
Custodia et al 2001 T2 heat shock,
GuhaThakurta et al 2002 T1 upregu on heat stress, Lund
et al 2002 Aging time course Fig2C heatshock, Reinke et
al 2004, list of genes in cluster order, Reinke et al
2004, list of genes in cluster B, Romagnolo et al 2002
Fig2a heat shock, Shen et al 2005 T1 hif-1indepen
hypoxia, ViswanathanM et al 2005 S2 sir-2.1 regulated
F44E7.9 Aff_F44E7.9 P W All gene names: F44E7.9; 5G271; CE10396;
WBGene00018431; WP:CE10396
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al
2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes
common to feeding ANOVA, Wang et al 2003 S3 genes
pass one-way ANOVA
F45D11.10 Aff_F45D11_39.B P W All gene names: F45D11.10; 2B281; CE23733;
WBGene00018456; WP:CE23733
F45E12.5 Aff_F45E12.4 P W All gene names: F45E12.5; F45E12.5b.1; F45E12.5b.2;
2H598; CE02741; CE32049; WBGene00018475; WP:CE02741;
WP:CE32049
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F45H11.1 Aff_F45H11.1 P W All gene names: F45H11.1; 1K947; CE16055; CE38353;
WBGene00009743; WP:CE16055; WP:CE38353
WormBase description: Zinc finger, C2H2 type
F46A9.6 Aff_C17E4.11 P W All gene names: mec-8; F46A9.6; F46A9.6.1; F46A9.6.2;
F46A9.6.3; 1K18; CE08260; NM_060107; WBGene00003172;
WP:CE08260
WormBase description: mecanosensory gene mec-8
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster A, Reinke et al 2004, list of genes in
cluster order, Wang et al 2003 S4 Early genes, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
F46E10.2 Aff_F46E10.C P W All gene names: F46E10.2; F46E10.2.1; F46E10.2.2;
F46E10.C; F46E10.H; F46E10.J; 5H1; CE20813;
WBGene00018489; WP:CE20813
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, Zhang et al 2002, T1 mec-3 dependent genes
F46F3.1 Aff_F46F3.1 P W All gene names: ceh-27; F46F3.1; 5M140; CE36695;
NM_073551; WBGene00000449; WP:CE36695
WormBase description: ceh-27 encodes a homeodomain
protein of the NK-2 class that contains Drosophila
scarecrow and human NKX-2 (OMIM:606727); CEH-27
activity is essential for embryogenesis and appears to
be required for maintaining hypodermal integrity during
movement as embryos lacking CEH-27 burst at a breach in
the ventral hypodermis upon commencement of muscle
contractions; CEH-27 expression is first detected in
the ~100-cell embryo in what appear to be MS-derived
cells while in later embryos expression is seen in a
number of cells in the anterior head region.
WormBase CDS description: homeobox protein (NK-2
subfamily)
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F47A4.2 Aff_F47A4.2 P W All gene names: dpy-22; mdt-12; psa-6; sop-1; F47A4.2;
CE16058; NM_077244; WBGene00001081; WP:CE16058; XK430
WormBase description: dpy-22 encodes a broadly
expressed protein, homologous to the human
transcriptional mediator protein TRAP230, which is
involved in WNT and RAS signaling, as well as in dosage
compensation; DPY-22 has a C-terminal glutamine-rich
domain that is dispensable for inhibition of
RAS-dependent cell differentiation, but is required for
inhibition of BAR-1-dependent gene expression.
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen
F47G4.2 Aff_F47G4.2 P W All gene names: F47G4.2; 1O670; CE19875;
WBGene00009823; WP:CE19875
WormBase description: Leucine Rich Repeat (2 copies)
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma
F48E8.1 Aff_F48E8.1 P W All gene names: lon-1; F48E8.1; 3G567; CE01953;
CE29046; CE30996; NM_065765; NM_065766; NM_171866;
WBGene00003055; WP:CE01953; WP:CE29046; WP:CE30996
WormBase description: The lon-1 gene encodes a protein
belonging to the PR-protein superfamily that is a
target of DBL-1 (TGF-beta) signaling, and that
regulates polyploidization and body length.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F49C12.9 Aff_F49C12.9 P W All gene names: F49C12.9; 4K80; CE10780;
WBGene00009878; WP:CE10780
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
F52A8.5 Aff_F52A8.5 P W All gene names: F52A8.5; F52A8.5.1; F52A8.5.2; 1H922;
CE05912; WBGene00009918; WP:CE05912
WormBase description: F52A8.5 is orthologous to the
human gene GLYCINE CLEAVAGE SYSTEM PROTEIN H (GCSH;
OMIM:238330), which when mutated leads to glycine
encephalopathy.
WormBase CDS description: glycine cleavage system H
protein like
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F52E4.7 Aff_F52E4.7 P W All gene names: F52E4.7; CE10836; WBGene00018703;
WP:CE10836; XD714
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F52F12.7 Aff_F52F12.7 P W All gene names: F52F12.7; 1K507; CE10852;
WBGene00009940; WP:CE10852
WormBase description: F52F12.7 is orthologous to the
human gene STEROIDOGENIC ACUTE REGULATORY PROTEIN
(STAR; OMIM:600617), which when mutated leads to
disease.
WormBase CDS description: steroidogenic acute
regulatory protein like
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, ViswanathanM et al 2005 S2 sir-2.1
regulated
F52G3.5 Aff_F52G3.5 P W All gene names: F52G3.5; CE35720; WBGene00018713;
WP:CE35720; XR588
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F53E10.6 Aff_F53E10.6 P W All gene names: F53E10.6; F53E10.6.1; F53E10.6.2; 5D80;
CE10930; WBGene00018762; WP:CE10930
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F53G2.1 Aff_F53G2.1 P W All gene names: F53G2.1; 2C783; CE10990;
WBGene00018766; WP:CE10990
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
F54A5.1 Aff_F54A5.E P W All gene names: F54A5.1; F54A5.1.1; F54A5.1.2; F54A5.E;
1B465; CE20859; WBGene00018786; WP:CE20859
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, Reinke et al 2004, list of
genes in cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003
S4 Early genes, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F54B11.3 Aff_F54B11.3 P W All gene names: unc-84; F54B11.3; CE27761; CE28236;
WBGene00006816; WP:CE27761; WP:CE28236; XO207
WormBase description: unc-84 encodes a transmembrane
protein that contains a SUN domain with homology to S.
pombe Sad1 and affects nuclear migration and anchoring
of various cell types together with UNC-83 and ANC-1,
thereby affecting coordinated locomotion, vulval
formation, and egg laying; UNC-84 is localized to the
nuclear envelope and requires LMN-1 for this
localization, and it is expressed in the nuclear
envelope of essentially all adult and embryonic cells.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F54C9.1 Aff_F54C9.1 P W All gene names: iff-2; F54C9.1; F54C9.1.1; F54C9.1.2;
F54C9.1.3; 2I850; CE02249; NM_063406; WBGene00002065;
WP:CE02249
WormBase description: initiation factor 5A
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
F54C9.9 Aff_F54C9.9 P W All gene names: F54C9.9; 2I871; CE20865;
WBGene00010044; WP:CE20865
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen
F54F2.2 Aff_F54F2.2 P W All gene names: zfp-1; zpf-1; F54F2.2; F54F2.2a.1;
F54F2.2a.2; F54F2.2a.3; F54F2.2c.1; F54F2.2c.2; 3J897;
CE25003; CE26933; CE33653; WBGene00006975; WP:CE25003;
WP:CE26933; WP:CE33653
WormBase description: zfp-1 encodes a leucine zipper,
zinc finger, and PHD/LAP domain (plant
homeodomain/leukemia-associated protein)-containing
protein homologous to human AF10 (OMIM:602409, which is
involved in chromosomal translocations associated with
acute leukemia); loss of zfp-1 activity via
RNA-mediated interference (RNAi) results in suppression
of RNAi, suggesting that ZFP-1 plays a role in gene
silencing; based on sequence similarity, ZFP-1 is
predicted to associate with chromatin.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F55A12.8 Aff_F55A12.8 P W All gene names: F55A12.8; F55A12.8.1; F55A12.8.2;
F55A12.8.3; 1F918; CE11131; WBGene00018866; WP:CE11131
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes
F55A8.1 Aff_F55A8.1 P W All gene names: egl-18; elt-5; pvl-3; F55A8.1;
F55A8.1.1; F55A8.1.2; F55A8.1.3; 4C681; CE28339;
NM_067742; WBGene00001186; WP:CE28339
WormBase description: egl-18 encodes a member of the
GATA-family of transcription factors that affects cell
migration, cell fate specification; expressed in the
head, in hypodermal seam cells, VC neurons, and vulval
precursor cells.
WormBase CDS description: zinc finger protein
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, list of genes in cluster E, ViswanathanM et
al 2005 S2 sir-2.1 regulated
F55D12.1 Aff_F55D12.1 P W All gene names: F55D12.1; 1I459; CE05955;
WBGene00010110; WP:CE05955
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05
F55F3.1 Aff_F55F3.1 P W All gene names: aakb-1; F55F3.1; F55F3.1.1; F55F3.1.2;
CE18744; WBGene00010115; WP:CE18744; XO377
Member of lists (Publications lists):
Golden et al 2004, N2 vs daf-2
different genes at , Golden et al 2004, N2 vs daf-2 age
different gene, McCarroll et al 2004 SFig1-4 conserved
w/ Drosoph, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F55F8.5 Aff_F55F8.5 P W All gene names: tag-345; F55F8.5; F55F8.5.1; F55F8.5.2;
1G224; CE11196; WBGene00018893; WP:CE11196
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, ViswanathanM et al 2005
S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0
F56A11.3 Aff_F56A11.3 P W All gene names: efn-4; mab-26; F56A11.3; 4B319;
CE29503; NM_067546; WBGene00001165; WP:CE29503
WormBase description: efn-4 encodes a member of the
ephrin family of ligands that affects neuroblast
migrations during closure of the ventral gastrulation
cleft and subsequent epidermal morphogenesis, possibly
functioning independently of EFN-1, EFN-2, EFN-3, and
the VAB-1 receptor during morphogenesis; can interact
with VAB-1 in vitro, and is expressed in neural and
epidermal precursors at the 100-cell stage, in head
neurons, pharyngeal cells, lateral and tail neurons,
and in the ectoderm during epidermal enclosure.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster A,
Reinke et al 2004, list of genes in cluster order
F56C11.6 Aff_F56C11.6 P W All gene names: F56C11.6; 1A647; CE17905; CE33402;
WBGene00018958; WP:CE17905; WP:CE33402
WormBase description: carboxylesterases
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster D, ViswanathanM et al 2005 S2 sir-2.1
regulated
F56H1.3 Aff_C04F1.3 P W All gene names: F56H1.3; 1G306; CE17914;
WBGene00018994; WP:CE17914
Member of lists (Publications lists):
Reinke et al 2004, herm sperm, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, spermatogenesis enriched genes, Reinke et al
2004, fem3 enriched genes, ViswanathanM et al 2005 S2
sir-2.1 regulated
F57B9.1 Aff_F57B9.1 P W All gene names: F57B9.1; 3I53; CE01335; WBGene00018996;
WP:CE01335
WormBase description: PNP/PMP oxidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Shen et al 2005 T1 hif-1 depend hypoxia,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F57B9.6 Aff_F57B9.6 P W All gene names: inf-1; F57B9.6; F57B9.6a.1; F57B9.6a.2;
3I21; CE01341; CE38524; Ce1F; CeIF; NM_066108;
WBGene00002083; WP:CE01341; WP:CE38524
WormBase description: inf-1 encodes a protein with high
similarity to eukaryotic initiation factor 4A.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Romagnolo et al 2002 Fig3b Protein Synthesis,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Early genes, Wang et al 2003 S3 genes
pass one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F57C12.5 Aff_F57C12.5 P W All gene names: mrp-1; sdf-14; F57C12.5; F57C12.5d.1;
F57C12.5d.2; F57C12.5d.3; CE25015; CE29412; CE31189;
CE34565; CE39102; NM_075721; WBGene00003407;
WP:CE25015; WP:CE29412; WP:CE31189; WP:CE34565;
WP:CE39102; XB196
WormBase description: ABC transporter
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F57F4.2 Aff_F57F4.2 P W All gene names: F57F4.2; 5G868; CE11340;
WBGene00019016; WP:CE11340
Member of lists (Publications lists):
Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang
et al 2003 S4 genes pass two-wayANOVA P0
F58D2.1 Aff_F58D2.1 P W All gene names: F58D2.1; 4N951; CE18782;
WBGene00010240; WP:CE18782
WormBase description: C.elegans ZYG-11 protein like
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b others
F58E1.8 Aff_F58E1.8 P W All gene names: fbxb-18; F58E1.8; 2B974; CE11386;
WBGene00019039; WP:CE11386
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; this gene's
encoded protein also contains leucine-rich repeats.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F58G6.1 Aff_F58G6.1 P W All gene names: F58G6.1; F58G6.1.1; F58G6.1.2; 4K410;
CE03428; WBGene00010272; WP:CE03428
WormBase description: amphiphysin like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
F58G6.5 Aff_F58G6.5 P W All gene names: nhr-34; F58G6.5; 4K430; CE27764;
CE35564; CE35565; NM_069315; NM_171412; WBGene00003627;
WP:CE27764; WP:CE35564; WP:CE35565
WormBase description: nhr-34 encodes a member of the
nuclear receptor superfamily; phylogenetic analyses
indicate that NHR-34 is a divergent nuclear receptor
that likely arose from the expansion and
diversification of the HNF4 (NR2A) subgroup in C.
elegans; the role of NHR-34 in C. elegans development
and/or behavior, and the NHR-34 expression pattern, are
not yet known.
F58H1.5 Aff_F58H1.5 P W All gene names: F58H1.5; F58H1.5.1; F58H1.5.2; 5M441;
CE06029; WBGene00010288; WP:CE06029
F59D6.1 Aff_F59D6.1 P W All gene names: F59D6.1; 5D527; CE11476;
WBGene00019103; WP:CE11476
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
H12C20.2 Aff_F38B7.7 P W All gene names: pms-2; H12C20.2; 5M48; CE18807;
CE19915; NM_073532; NM_073533; WBGene00004064;
WP:CE18807; WP:CE19915
WormBase description: DNA mismatch repair protein
(PMS2)
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen
H12D21.8 Aff_H12D21.8 P W All gene names: H12D21.8; 5P385; CE19921;
WBGene00010384; WP:CE19921
H20J04.6 Aff_H20J04_717.A P W All gene names: H20J04.6; H20J04.B; 2E613; CE20973;
WBGene00019221; WP:CE20973
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
H28G03.1 Aff_H28G03.1 P W All gene names: H28G03.1; H28G03.1a.1; H28G03.1a.2;
H28G03.1c.1; H28G03.1c.2; CE30079; CE30080; CE31190;
WBGene00019249; WP:CE30079; WP:CE30080; WP:CE31190;
XF837
WormBase description: RNA binding protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
H32C10.2 Aff_H32C10.B P W All gene names: H32C10.2; 4G697; CE21004;
WBGene00019256; WP:CE21004
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
K01D12.12 Aff_K01D12.12 P W All gene names: cdr-6; K01D12.12; 5M892; CE06051;
NM_073712; WBGene00010471; WP:CE06051
WormBase description: glutathione S-transferase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
K01G5.1 Aff_K01G5.1 P W All gene names: tag-331; K01G5.1; 3K846; 3L846;
CE26718; WBGene00010476; WP:CE26718
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, list
of genes in cluster E
K01G5.6 Aff_K01G5.6 P W All gene names: rib-2; K01G5.6; 3L835; CE16196;
NM_066967; WBGene00004361; WP:CE16196
WormBase description: The rib-2 gene encodes an
ortholog of human EXT2, which when mutated leads to
hereditary multiple exostoses, type II (OMIM:133701).
WormBase CDS description: MULTIPLE EXOSTOSES HOMOLOG 2
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Wang et al 2003 S7 SAGE genes in the dataset,
Wang et al 2003 S8 SAGE genes in the dauer exit
K01H12.1 Aff_K01H12.1 P W All gene names: K01H12.1; 4K471; CE03453;
WBGene00010484; WP:CE03453
WormBase description: K01H12.1 encodes a small protein
conserved in diverse eukaryotes, with a CSL motif (a
probable zinc finger, sometimes found associated with
the N-terminal domain of DnaJ protein); K01H12.1 is
probably a small subunit or ancillary protein of RNA
polymerase II Elongator or of a hypothetical
diphthamide synthase complex; K01H12.1 is orthologous
to to mammalian DESR1 (diphtheria toxin and Pseudomonas
exotoxin A sensitivity required gene 1) and S.
cerevisiae KTI11; DESR1, and probably KTI11, enables
the first step in posttranslational modification of
histidine to dipthamide; K01H12.1 has no obvious
function in mass RNAi assays.
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated
genes, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
K02B2.1 Aff_K02B2.1 P W All gene names: K02B2.1; 4G707; CE30082;
WBGene00019295; WP:CE30082
WormBase description: 6-phosphofructo-2-kinase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 daf-16 Resveratrol
K02E10.2 Aff_K02E10.2 P W All gene names: hid-1; K02E10.2; CE04694; CE34327;
NM_076053; WBGene00001844; WP:CE04694; WP:CE34327;
XD111
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
K02G10.1 Aff_K02G10.1 P
