Gene name Source Gene ID Annotation Date Added by
AC7.2 Aff_AC7.2 P W All gene names: soc-2; sur-8; AC7.2; AC7.2a.1;
AC7.2a.2; 4F892; CE25736; CE31275; NM_171332;
WBGene00004929; WP:CE25736; WP:CE31275
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Wang et al 2003 S4 Early genes,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0
AFF_F45D11_39.C Aff_F45D11_39.C P W
AFF_F46F11.8 Aff_F46F11.8 P W
AFF_R144.3 Aff_R144.3 P W
AFF_Y38F2A_6126.E Aff_Y38F2A_6126.E P W
AFF_Y55B1B_119.E Aff_Y55B1B_119.E P W
B0001.2 Aff_B0001.2 P W All gene names: B0001.2; 4M912; CE36776;
WBGene00007087; WP:CE36776
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, herm soma
enriched genes, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0244.8 Aff_B0244.8 P W All gene names: egg-1; B0244.8; 3G819; CE32094;
WBGene00015083; WP:CE32094
WormBase description: LDL receptor
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, IVb male soma enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated, Wang et al 2003 S6
removed genes of contamination
B0280.5 Aff_B0280.5 P W All gene names: B0280.5; 3I192; CE31868;
WBGene00015102; WP:CE31868
WormBase description: B0280.5 encodes a protein with a
chitin binding peritrophin-A domain that is required,
in conjunction with CEJ-1, for early embryonic
development; B0280.5 mRNA is expressed specifically in
the adult hermaphrodite germ line, is a direct target
of GLD-1, and has an RNAi phenotype consistent with the
hypothesis that B0280.5 is an effector of GLD-1 in the
germline.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, GO categories, Reinke et al 2004, IVb male
soma enriched genes, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S6 removed genes of
contamination
B0334.5 Aff_B0334.5 P W All gene names: B0334.5; 2L789; CE30122;
WBGene00007145; WP:CE30122
WormBase description: phytoene synthase precursor
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0361.5 Aff_B0361.5 P W All gene names: psd-1; B0361.5; 3I360; CE37076;
CE37696; WBGene00015159; WP:CE37076; WP:CE37696
WormBase description: Phosphatidylserine decarboxylase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes
pass two-wayANOVA P0
B0365.1 Aff_B0365.1 P W All gene names: B0365.1; 5N599; CE07719;
WBGene00007150; WP:CE07719
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: ATP citrate lyase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
B0414.8 Aff_B0414.8 P W All gene names: B0414.8; 1G380; CE30413; CE36910;
WBGene00015176; WP:CE30413; WP:CE36910
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C01F1.2 Aff_C01F1.2 P W All gene names: C01F1.2; 2E591; CE06743;
WBGene00015297; WP:CE06743
WormBase description: C01F1.2 is orthologous to the
human gene SCO (CYTOCHROME OXIDASE DEFICIENT, YEAST)
HOMOLOG 1 (SCO1; OMIM:603644), which when mutated leads
to early-onset hepatic failure; the C01F1.2 protein is
predicted to be mitochondrial with 68% accuracy.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
C01G8.6 Aff_C01G8.6 P W All gene names: C01G8.6; 1F868; CE07807;
WBGene00015313; WP:CE07807
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, Fig2b shared gemlines, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , ViswanathanM et al 2005 S2
sir-2.1 regulated
C04E6.11 Aff_C04E6.11 P W All gene names: C04E6.11; 5G396; CE36911;
WBGene00015425; WP:CE36911
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, herm soma enriched genes, Wang et al 2003 S4
Early genes, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C04F12.10 Aff_C04F12.10 P W All gene names: Ce-face-1; fce-1; C04F12.10; 1K288;
CE19683; NM_060181; WBGene00001405; WP:CE19683
WormBase description: fce-1 encodes an ortholog of
'farnesylated-proteins converting enzyme 1' (FACE-1),
and thus probably enables post-translational processing
of proteins (such as LET-60/RAS) carrying a C-terminal
CaaX motif; FCE-1 protein probably accounts for the
EDTA-sensitive,
tosylphenylalanylchloromethane-insensitive component of
CaaX-proteolytic activity in membrane extracts from C.
elegans, and FCE-1 can cleave a farnesylated peptide in
vitro; the S. cerevisiae homolog of FCE-1 (Ste24p)
cleaves the precursor of yeast a-factor mating
pheromone after its farnesylated cysteine residue, and
transgenic FCE-1 rescues a mating defect of mutant
yeast lacking both the Ste24p and the Rce1p
CaaX-proteases.
WormBase CDS description: Zinc-binding metalloprotease
domain
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S4 Climbing, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
C04F6.5 Aff_C04F6.5 P W All gene names: dhs-27; C04F6.5; CE37079; NM_076190;
WBGene00000990; WP:CE37079; XE32
WormBase description: dhs-27 encodes a short-chain
dehydrogenase predicted to be mitochondrial.
WormBase CDS description: alcohol/ribitol dehydrogenase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C06A5.11 Aff_C06A5.3 P W All gene names: sir-2.4; C06A5.11; 1G567; CE27656;
NM_059332; WBGene00004803; WP:CE27656
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C07D8.6 Aff_C07D8.6 P W All gene names: C07D8.6; C07D8.6.1; C07D8.6.2; CE06776;
WBGene00015565; WP:CE06776; XH961
WormBase description: aldehyde reductase
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, mixed oogenesis soma, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang
et al 2003 S3 genes pass one-way ANOVA, Wang et al
2003 S4 genes pass two-wayANOVA P0
C10F3.1 Aff_C10F3.1 P W All gene names: C10F3.1; 5G479; CE08066;
WBGene00015677; WP:CE08066
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C14B1.2 Aff_C14B1.2 P W All gene names: C14B1.2; 3E791; CE00899;
WBGene00007573; WP:CE00899
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C14C10.4 Aff_C14C10.4 P W All gene names: C14C10.4; C14C10.4.1; C14C10.4.2; 5N74;
CE05283; WBGene00007587; WP:CE05283
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, GO categories, Reinke
et al 2004, herm soma enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005
S2 daf-16 Resveratrol
C14C11.2 Aff_C14C11.2 P W All gene names: C14C11.2; 5G143; CE06821;
WBGene00015766; WP:CE06821
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C24H10.5 Aff_C24H10.5 P W All gene names: uvt-2; C24H10.5; CE29674; NM_076463;
WBGene00006861; WP:CE29674; XF690
WormBase description: uvt-2 encodes a protein that
contains four EF-hand calcium binding motifs with
similarity to human calmodulin; mRNA weakly expressed
in L1 through L4 larval stages and in the adult
hermaphrodite.
WormBase CDS description: EF-hand calcium binding
protein
C25A1.13 Aff_C25A1.13 P W All gene names: C25A1.13; 1K769; CE08379;
WBGene00007712; WP:CE08379
WormBase description: NADH-ubiquinone oxidoreductase B8
subunit
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C25G4.4 Aff_C25G4.4 P W All gene names: tag-347; C25G4.4; 4N218; CE05305;
WBGene00007732; WP:CE05305
WormBase description: SAND domain
Member of lists (Publications lists):
Jiang et al 2001 Fig1 male-enriched
TF, Reinke et al 2004, spermatogenesis enriched genes,
Reinke et al 2004, fem3 enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
males vs glp4 male enriched , Reinke et al 2004, GO
categories, Reinke et al 2004, shared sperm,
ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C27F2.7 Aff_C27F2.7 P W All gene names: C27F2.7; 3G72; CE38942; WBGene00016169;
WP:CE38942
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C27H6.4 Aff_C27H6.4 P W All gene names: C27H6.4; 5K464; CE08428; CE31322;
WBGene00007786; WP:CE08428; WP:CE31322
C30C11.2 Aff_C30C11.2 P W All gene names: rpn-3; C30C11.2; C30C11.2.1;
C30C11.2.2; 3J537; CE00101; NM_066468; WBGene00004460;
WP:CE00101
WormBase description: Diphenol oxidase A2
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
C30G12.7 Aff_C30G12.7 P W All gene names: puf-8; C30G12.7; 2H586; CE37486;
NM_063122; WBGene00004244; WP:CE37486
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, IVb
male soma enriched genes, Wang et al 2003 S7 SAGE
genes in the dataset, Wang et al 2003 S8 SAGE genes in
the dauer exit
C42C1.11 Aff_C42C1.11 P W All gene names: AP-1; C42C1.11; C42C1.11a.1;
C42C1.11a.2; C42C1.11c.1; C42C1.11c.2; 4N45; CE24840;
CE33564; CE33565; WBGene00016589; WP:CE24840;
WP:CE33564; WP:CE33565
WormBase description: peptidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C43E11.7 Aff_C43E11.7 P W All gene names: ndx-7; C43E11.7; 1E808; CE30504;
NM_058935; WBGene00003584; WP:CE30504
WormBase description: ndx-7 encodes a NUDIX hydrolase;
by sequence comparison, NDX-7 is predicted to function
as a pyrophosphatase, and is most closely related to
the mouse RP2 protein that has unknown substrate
specificity but is regulated transcriptionally by the
presence of androgens; in C. elegans, loss of ndx-7
activity via RNA-mediated interference (RNAi) does not
result in any obvious abnormalities, consistent with
the proposed nonessential roles for Nudix proteins in
eliminating potentially toxic nucleotide metabolites
from cells and modulating levels of metabolic
intermediates by shuttling them into alternative
biochemical pathways.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
C44B9.3 Aff_C44B9.3 P W All gene names: C44B9.3; 3L966; CE05405;
WBGene00008080; WP:CE05405
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C44B9.5 Aff_C44B9.5 P W All gene names: C44B9.5; 3L989; CE37755;
WBGene00008082; WP:CE37755
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
C46F11.3 Aff_C46F11.3 P W All gene names: C46F11.3; 3E738; CE08774;
WBGene00008118; WP:CE08774
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C48B4.6 Aff_C48B4.6 P W All gene names: C48B4.6; 3K646; CE00482;
WBGene00008169; WP:CE00482
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, oogenesis enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S8 SAGE genes in
the dauer exit, Wang et al 2003 S7 SAGE genes in the
dataset
C50F7.4 Aff_C50F7.4 P W All gene names: C50F7.4; 4I495; CE04242; SCB2;
WBGene00016844; WP:CE04242
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: succinyl-CoA synthetase beta
chain
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
C56C10.10 Aff_C56C10.10 P W All gene names: C56C10.10; 2G884; CE02564;
WBGene00016966; WP:CE02564
WormBase description: TPR domain
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
CD4.6 Aff_CD4.6 P W All gene names: pas-6; CD4.6; CD4.6.1; CD4.6.2; 5G64;
CE16954; NM_072071; WBGene00003927; WP:CE16954
WormBase description: pas-6 encodes a type 1 alpha
subunit of the 26S proteasome's 20S protease core
particle (CP); PAS-6 is required for embryonic, larval,
and germline development and by homology, is predicted
to comprise the outer rings of the proteasome and to
play a role in selective degradation of ubiquitinated
proteins during development; in vitro, PAS-6 interacts
with BRP-1, a glutamine/asparagine (Q/N)-rich
domain-containing protein conserved amongst nematodes,
and with other members of the proteasome.
WormBase CDS description: protease
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
D1007.5 Aff_D1007.5 P W All gene names: D1007.5; D1007.5a.1; D1007.5a.2;
D1007.5b.1; D1007.5b.2; 1F150; CE29034; CE33577;
WBGene00017003; WP:CE29034; WP:CE33577
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, ViswanathanM
et al 2005 S2 sir-2.1 regulated
D2023.5 Aff_D2023.5 P W All gene names: D2023.5; 5M306; CE09075;
WBGene00008409; WP:CE09075
WormBase description: thiosulphate sulphurtransferase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, oogenesis enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
D2030.8 Aff_D2030.8 P W All gene names: D2030.8; 1I169; CE28545;
WBGene00008418; WP:CE28545
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
D2096.4 Aff_D2096.4 P W All gene names: sqv-1; D2096.4; D2096.4.1; D2096.4.2;
4J127; CE04302; NM_069017; WBGene00005019; WP:CE04302
WormBase description: sqv-1 encodes a UDP-glucuronic
acid decarboxylase, biochemically active in vitro, that
is required for cytokinesis of one-cell embryos and for
vulval morphogenesis; SQV-1 is coexpressed with the
nucleotide-sugar transporter homolog SQV-7 in in the
vulva and in oocytes; SQV-1 colocalizes with SQV-5 and
SQV-7 to punctate foci (probably the Golgi apparatus)
in the cytoplasm of the vulva, the uterus and oocytes,
within which SQV-1 may act to promote the biosynthesis
of chondroitin glycosaminoglycans; the common
requirement for SQV-1 in both cytokinesis and
morphogenesis may be to promote filling an
extracellular space with hygroscopic proteoglycans
(either in the eggshell, or underneath the L4 cuticle),
which in turn may cause the space to fill with fluid.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, McElwee et al 2003 T1 targets of
daf-16, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, GO
categories, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
E02H1.2 Aff_E02H1.2 P W All gene names: E02H1.2; 2J878; CE01537;
WBGene00008456; WP:CE01537
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: GTP binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, ViswanathanM
et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5
genes common to feeding ANOVA, Wang et al 2003 S3
genes pass one-way ANOVA
F09E5.3 Aff_F09E5.3 P W All gene names: F09E5.3; F09E5.3.1; F09E5.3.2; 2F665;
CE02610; WBGene00017283; WP:CE02610
WormBase description: Deoxyribose-phosphate aldolase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
F13C5.1 Aff_F13C5.1 P W All gene names: F13C5.1; CE19383; WBGene00017422;
WP:CE19383; XB223
Member of lists (Publications lists):
Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang
et al 2003 S4 genes pass two-wayANOVA P0
F15B10.1 Aff_F15B10.1 P W All gene names: F15B10.1; 4H370; CE16987; CE39241;
WBGene00017480; WP:CE16987; WP:CE39241
WormBase description: The F15B10.1 gene encodes an
ortholog of the Kluyveromyces lactis
UDP-N-acetylglucosamine (UPD-GlcNAc) transporter; when
expressed in human cells deficient for GDP-fucose
transport into the Golgi, F15B10.1 is able to weakly
restore such transport (with ~10% efficiency).
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated
F16D3.4 Aff_F16D3.4 P W All gene names: F16D3.4; 1I940; CE09437;
WBGene00008887; WP:CE09437
WormBase description: F16D3.4 encodes an ortholog of
human TUBULIN-SPECIFIC CHAPERONE D (TBCD; OMIM:604649),
also known as tubulin-folding cofactor D; F16D3.4 may
be a ligand and effector of the ARL2 ortholog EVL-20.
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F16H11.3 Aff_F16H11.3 P W All gene names: F16H11.3; CE04398; NM_076394;
WBGene00017532; WP:CE04398; XF264
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F17A9.2 Aff_F17A9.2 P W All gene names: F17A9.2; 5G593; CE19798;
WBGene00017534; WP:CE19798
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order, Wang
et al 2003 S5 genes common to feeding ANOVA, Wang et
al 2003 S3 genes pass one-way ANOVA
F20D1.3 Aff_F20D1.3 P W All gene names: F20D1.3; F20D1.3.1; F20D1.3.2; CE31486;
WBGene00008975; WP:CE31486; XP595
F21F3.4 Aff_F21F3.4 P W All gene names: F21F3.4; 1F465; CE09534;
WBGene00017674; WP:CE09534
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F25H2.5 Aff_F25H2.5 P W All gene names: F25H2.5; F25H2.5.1; F25H2.5.2;
F25H2.5.3; 1L130; CE09650; WBGene00009119; WP:CE09650
WormBase description: nucleoside diphosphate kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F26H9.4 Aff_F26H9.4 P W All gene names: F26H9.4; 1J882; CE09709;
WBGene00009176; WP:CE09709
WormBase description: Yeast hypothetical protein YG15
like
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, McCarroll et al 2004 SFig5
conserved w/ yeast, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, GO categories, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F29C12.4 Aff_F29C12.4 P W All gene names: F29C12.4; 2N411; CE19822;
WBGene00009246; WP:CE19822
WormBase description: Elongation factor Tu family
(contains ATP/GTP binding P-loop), Elongation factor G
C-terminus
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Romagnolo et al 2002 Fig3b Protein Synthesis,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F32D1.6 Aff_F32D1.6 P W All gene names: F32D1.6; 5E852; CE09870;
WBGene00017985; WP:CE09870
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F35C11.5 Aff_F35C11.5 P W All gene names: F35C11.5; 2I545; CE03285;
WBGene00009404; WP:CE03285
WormBase description: phospholipase A2
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, Reinke et al 2004, GO
categories, Reinke et al 2004, list of genes in cluster
E, ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F38E1.7 Aff_F38E1.7 P W All gene names: mom-2; F38E1.7; 5I837; CE17806;
NM_072753; WBGene00003395; WP:CE17806
WormBase description: mom-2 encodes a member of the Wnt
family of secreted signaling glycoproteins that is
required for induction of endodermal (gut) tissue in
the 4-cell stage embryo; MOM-2, required in the
inducing blastomere (P2) at the 4-cell stage, may be
the ligand for MOM-5, a Frizzled homolog, thought to
act in the receiving blastomere (EMS); MOM-2
genetically interacts in the same pathway as KIN-19,
but parallel to APR-1; MOM-2 also may be a ligand for
LIN-18, a Ryk homolog.
WormBase CDS description: WNT family protein
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F43D2.2 Aff_F43D2.2 P W All gene names: F43D2.2; 5P112; CE10336;
WBGene00009651; WP:CE10336
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F44G4.3 Aff_F44G4.3 P W All gene names: F44G4.3; 2J288; CE02230;
WBGene00009713; WP:CE02230
F46E10.10 Aff_F46E10.D P W All gene names: F46E10.10; F46E10.10b.1; F46E10.10b.2;
F46E10.10c.1; F46E10.10c.2; F46E10.D; F46E10.I; 5G996;
CE20820; CE33096; CE33097; WBGene00018491; WP:CE20820;
WP:CE33096; WP:CE33097
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
Member of lists (Publications lists):
Link et al 2003 T2 Abeta repressed,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F46F11.2 Aff_F46F11.2 P W All gene names: cey-2; F46F11.2; F46F11.2.1;
F46F11.2.2; 1G189; CE10598; NM_059244; WBGene00000473;
WP:CE10598
WormBase description: cey-2 encodes a cold-shock/Y-box
domain-containing protein; by homology, CEY-2 is
predicted to function as either an RNA-binding protein
involved in translation or RNA processing, or a
DNA-binding protein involved in transcriptional
regulation; cey-2 mRNA is expressed maternally in the
early embryo, in a pattern characteristic of class II
maternal RNAs, which are initially detected throughout
the embryo but restricted to the P, or germline,
lineage as cell division progresses; as loss of cey-2
activity via large-scale RNAi screens does not result
in any obvious abnormalities, the precise role of cey-2
in C. elegans development and/or behavior is not yet
known.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, GO categories,
Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F48C1.6 Aff_F48C1.6 P W All gene names: F48C1.6; 1F886; CE10742;
WBGene00018599; WP:CE10742
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F52C6.8 Aff_F52C6.8 P W All gene names: bath-4; F52C6.8; 2C172; CE10816;
WBGene00018665; WP:CE10816
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
F54B3.3 Aff_F54B3.3 P W All gene names: F54B3.3; F54B3.3.1; F54B3.3.2;
F54B3.3.3; 2K539; CE35878; WBGene00010015; WP:CE35878
WormBase description: ATPases associated with various
cellular activities (AAA)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, herm soma
enriched genes, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F54C8.2 Aff_F54C8.2 P W All gene names: F54C8.2; 3K519; CE00188;
WBGene00010036; WP:CE00188
WormBase description: Histone H3 similarity
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, GO
categories, Reinke et al 2004, list of genes in cluster
E, Reinke et al 2004, IVb male soma enriched genes
F54C9.8 Aff_F54C9.8 P W All gene names: puf-5; F54C9.8; 2I867; CE02258;
NM_063413; WBGene00004241; WP:CE02258
WormBase description: Pumilio-family RNA binding
domains (aka PUM-HD, Pumilio homology domain) (6
domains)
Member of lists (Publications lists):
Reinke et al 2004, Fig2b shared
gemlines, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S6 removed genes of
contamination
F54E12.2 Aff_F54E12.2 P W All gene names: F54E12.2; F54E12.2.1; F54E12.2.2; 4M98;
CE11083; WBGene00010061; WP:CE11083
WormBase description: helicase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F55A12.2 Aff_F55A12.2 P W All gene names: F55A12.2; F55A12.2d.1; F55A12.2d.2;
1F933; CE29396; CE30540; CE34317; CE34318;
WBGene00018863; WP:CE29396; WP:CE30540; WP:CE34317;
WP:CE34318
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F56A4.12 Aff_F56A4.A P W All gene names: F56A4.12; 5C954; CE25010;
WBGene00018920; WP:CE25010
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F56B3.8 Aff_F56B3.8 P W All gene names: F56B3.8; 4B529; CE34320;
WBGene00018932; WP:CE34320
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Wang et al 2003 S4 Early genes,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0
F56G4.5 Aff_Y53H1C.A P W All gene names: F56G4.5; F56G4.5.1; F56G4.5.2; 1L979;
CE23786; WBGene00010160; WP:CE23786
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: Thioredoxins
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
F57B10.3 Aff_F57B10.3 P W All gene names: F57B10.3; F57B10.3b.1; F57B10.3b.2;
F57B10.3b.3; F57B10.3b.4; 1H147; CE11302; CE33113;
WBGene00019001; WP:CE11302; WP:CE33113
WormBase description: F57B10.3 encodes an
experimentally confirmed cofactor-independent
phosphoglycerate mutase that is essential for embryonic
and larval viability, and for normal body morphology;
paradoxically, F57B10.3 is also required for normally
short livespan (in mass RNAi screens for Age
phenotypes); F57B10.3 is expressed widely in larvae and
adults, with highest expression in the nerve ring,
intestine and body wall muscles; F57B10.3 probably
functions in glycolytic and gluconeogenic metabolism.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F57C2.2 Aff_F57C2.2 P W All gene names: F57C2.2; 2O804; CE16153;
WBGene00010194; WP:CE16153
WormBase description: BTB (also known as BR-C/Ttk)
domain.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, ViswanathanM et al 2005 S2 sir-2.1 regulated
F58B3.5 Aff_F58B3.5 P W All gene names: mrs-1; F58B3.5; 4M398; CE06007;
NM_069795; WBGene00003415; WP:CE06007
WormBase description: mrs-1 encodes a predicted
cytoplasmic methionyl-tRNA synthetase (MetRS), a class
I aminoacyl-tRNA synthetase that catalyzes the
attachment of methionine to its cognate tRNA and is
thus required for protein biosynthesis; MRS-1 is
essential for embryogenesis and required also for a
normal rate of postembryonic growth.
WormBase CDS description: methionyl-tRNA synthetase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, mixed oogenesis soma, ViswanathanM et al 2005
S2 daf-16 Resveratrol
F59B2.7 Aff_F59B2.7 P W All gene names: rab-6.1; F59B2.7; 3K94; CE00234;
NM_066592; WBGene00004269; WP:CE00234
WormBase description: Rab6 (ras protein)
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
F, Reinke et al 2004, list of genes in cluster order,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F59F4.4 Aff_F59F4.4 P W All gene names: acl-1; F59F4.4; CE11552; NM_078205;
WBGene00010339; WP:CE11552; XQ469
WormBase description: 1-acyl-SN-glycerol-3-phosphate
acyltransferase
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Murphy et al 2003 Fig2 Class1 elongate
lifespan, Reinke et al 2004, fem3 enriched genes,
Reinke et al 2004, mixed sperm soma, Reinke et al 2004,
GO categories, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0,
Wang et al 2003 S4 Dauer Enriched
H02I12.1 Aff_H02I12.1 P W All gene names: H02I12.1; 4M141; CE37527;
WBGene00010351; WP:CE37527
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, GO categories,
Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
H02I12.5 Aff_H02I12.5 P W All gene names: H02I12.5; 4M166; CE16162;
WBGene00010353; WP:CE16162
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
H11L12.1 Aff_H11L12.1 P W All gene names: H11L12.1; CE20957; WBGene00019189;
WP:CE20957; XS322
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, Fig2b shared gemlines, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt males vs
glp4 male enriched , Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
K01C8.3 Aff_K01C8.3 P W All gene names: adc-1; tdc-1; K01C8.3; 2I563; CE21011;
CE28344; NM_063342; NM_063343; WBGene00006562;
WP:CE21011; WP:CE28344
WormBase description: aromatic-L-amino-acid
decarboxylase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, oogenesis enriched genes,
Reinke et al 2004, IVb male soma enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
K01C8.6 Aff_K01C8.6 P W All gene names: K01C8.6; 2I566; CE02267;
WBGene00010458; WP:CE02267
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
K01C8.7 Aff_K01C8.7 P W All gene names: K01C8.7; 2I565; CE02268;
WBGene00010459; WP:CE02268
WormBase description: Mitochondrial carrier proteins
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
K01D12.12 Aff_K01D12.12 P W All gene names: cdr-6; K01D12.12; 5M892; CE06051;
NM_073712; WBGene00010471; WP:CE06051
WormBase description: glutathione S-transferase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
K02D10.1 Aff_K02D10.1 P W All gene names: K02D10.1; K02D10.1b.1; K02D10.1b.2;
3J865; CE17151; CE29423; WBGene00019301; WP:CE17151;
WP:CE29423
WormBase description: 4-NITROPHENYLPHOSPHATASE
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
K04F10.6 Aff_K04F10.6 P W All gene names: rde-3; K04F10.6; 1G930; CE11740;
CE33137; NM_059433; NM_182080; WBGene00004325;
WBGene00019398; WP:CE11740; WP:CE33137
WormBase description: rde-3 encodes a
nucleotidyltransferase that is a member of the
polymerase beta nucleotidyltransferase superfamily that
includes poly(A) polymerases, 2-5 oligoadenylate
synthetases, C. elegans GLD-2, and S. cerevisiae Trf4p;
by homology, RDE-3 is predicted to function as a
poly(A) polymerase whose activity is required for
meiotic chromosome segregation, negative regulation of
DNA transposition, non-transgene-induced RNAi (i.e.
RNAi via feeding is affected, whereas RNAi via
expression of sense and antisense RNA from a transgene
is not), fertility, and viability; analysis of siRNA
levels in rde-3 mutant animals indicates that during
RNAi, RDE-3 activity is required at a point upstream of
siRNA accumulation; neither the precise mechanistic
role of RDE-3 in posttranscriptional silencing, nor the
RDE-3 expression pattern, is yet known.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
K04G2.6 Aff_K04G2.6 P W All gene names: K04G2.6; K04G2.6.1; K04G2.6.2; 1I619;
CE06100; WBGene00010565; WP:CE06100
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, mixed oogenesis soma, Reinke et al 2004, wt herm
vs wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated
K07C11.9 Aff_K07C11.9 P W All gene names: cogc-6; K07C11.9; 5I700; CE07351;
WBGene00019481; WP:CE07351
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
K07H8.3 Aff_K07H8.3 P W All gene names: K07H8.3; 4J55; CE18023; WBGene00019505;
WP:CE18023
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
K08F4.3 Aff_K08F4.3 P W All gene names: K08F4.3; 4K895; CE06151;
WBGene00010678; WP:CE06151
WormBase description: translocon-associated protein
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster E, Reinke et al 2004, IVb male soma enriched
genes, ViswanathanM et al 2005 S2 sir-2.1 regulated
K08H2.3 Aff_K08H2.3 P W All gene names: K08H2.3; CE06161; WBGene00010690;
WP:CE06161; XN855
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
R01H2.3 Aff_R01H2.3 P W All gene names: egg-2; R01H2.3; 3I146; CE00802;
WBGene00019811; WP:CE00802
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
R03D7.7 Aff_R03D7.7 P W All gene names: nos-1; R03D7.7; 2L242; CE01614;
NM_063957; WBGene00003783; WP:CE01614
WormBase description: nos-1 encodes an putative
RNA-binding protein that contains a zinc-binding motif
homologous to that of Drosophila Nanos, a
posterior-group protein required for embryonic
patterning and primordial germ cell development; in C.
elegans, NOS-1 is required redundantly with NOS-2, a
second Nanos homolog, for maintenance of germ cell
viability during postembryonic development and for
preventing primordial germ cells from dividing in the
absence of food; nos-1 mRNA is expressed dynamically in
the embryo, with early expression seen throughout the
embryo and later expression restricted solely to
germline blastomeres; nos-1 mRNA becomes undetectable
after the 200-cell stage, but reappears later at the
550-cell stage; NOS-1 protein is not detectable in
germline blastomeres until the 550-cell stage,
suggesting that NOS-1 might actually function
zygotically in germline specification.
WormBase CDS description: nanos protein
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
R05F9.6 Aff_R05F9.6 P W All gene names: R05F9.6; 2F181; CE04809;
WBGene00019890; WP:CE04809
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: phosphoglucomutase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0,
Wang et al 2003 S4 Dauer Enriched
R06C7.4 Aff_R06C7.4 P W All gene names: R06C7.4; 1H821; CE06247;
WBGene00011063; WP:CE06247
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated, Wang et al 2003 S6 removed
genes of contamination
R06F6.9 Aff_R06F6.9 P W All gene names: acbp-2; ech-4; R06F6.9; 2L111; CE01625;
NM_063929; WBGene00001153; WP:CE01625
WormBase description: enoyl CoA hydratase/isomerase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Romagnolo et al 2002 Fig3b Metabolism,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
R09B3.4 Aff_R09B3.4 P W All gene names: ubc-12; R09B3.4; 1M503; CE16309;
NM_060623; WBGene00006707; WP:CE16309
WormBase description: The ubc-12 gene encodes a
ubiquitin-conjugating enzyme whose substrate is NED-8,
and which is required for both embryogenesis and
terminal hypodermal differentiation; ubc-12(RNAi)
mutants either arrest during embryonic development or
show pleotropic defects (e.g., vulval eversion during
the L4 stage), as well as defective alae.
WormBase CDS description: Ubiquitin-conjugating enzymes
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
R107.7 Aff_R107.7 P W All gene names: gst-1; R107.7; R107.7.1; R107.7.2;
3K149; CE00302; NM_066605; WBGene00001749; WP:CE00302
WormBase description: gst-1 encodes a putative
glutathione S-transferase with highest similarity to
the pi class.
WormBase CDS description: glutathione S-transferase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S6 removed genes of contamination
R10E4.5 Aff_R10E4.5 P W All gene names: R10E4.5; 3F380; CE03559;
WBGene00011201; WP:CE03559
WormBase description: endonuclease
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, GO categories,
ViswanathanM et al 2005 S2 sir-2.1 regulated
R12E2.10 Aff_R12E2.10 P W All gene names: R12E2.10; 1E738; CE18142;
WBGene00020035; WP:CE18142
WormBase description: protein-tyrosine phosphatase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, GO categories,
Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
R166.3 Aff_R166.3 P W All gene names: R166.3; 2K828; CE03582; WBGene00011303;
WP:CE03582
WormBase description: The R166.3 gene encodes an
unfamiliar protein, with homologs in yeast and archaea,
that is orthologous to the human gene ALPORT SYNDROME,
MENTAL RETARDATION, MIDFACE HYPOPLASIA, AND
ELLIPTOCYTOSIS CHROMOSOMAL REGION GENE 1 (AMMECR1;
OMIM:300195); AMMECR1, when mutated, may be at least
partially responsible for mental retardation, midface
hypoplasia, or elliptocytosis.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
R186.3 Aff_R186.3 P W All gene names: R186.3; 5N446; CE12874; WBGene00011306;
WP:CE12874
WormBase description: signal recognition particle
receptor beta subunit like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
T01G5.7 Aff_T01G5.7 P W All gene names: T01G5.7; 5P593; CE12986;
WBGene00011342; WP:CE12986
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
T02G5.8 Aff_T02G5.8 P W All gene names: kat-1; T02G5.8; 2H367; CE29990;
NM_063054; WBGene00002183; WP:CE29990
WormBase description: kat-1 encodes a homolog of the
human gene ACAT1, which when mutated leads to
alpha-methylacetoaceticaciduria (OMIM:203750).
WormBase CDS description: acetoacetyl-C0A thiolase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
T03F1.3 Aff_T03F1.3 P W All gene names: T03F1.3; 1E435; CE13100;
WBGene00020185; WP:CE13100
WormBase description: T03F1.3 is orthologous to the
human gene PHOSPHOGLYCERETE KINASE 1 (PGK1;
OMIM:311800), which when mutated leads to hemolytic
anemia and neurologic disturbances.
WormBase CDS description: phosphoglycerate kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003
S4 genes pass two-wayANOVA P0
T03F1.7 Aff_T03F1.7 P W All gene names: T03F1.7; 1E420; CE30685;
WBGene00020189; WP:CE30685
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
T04A8.11 Aff_T04A8.11 P W All gene names: T04A8.11; 3F793; CE01066;
WBGene00011412; WP:CE01066
WormBase description: 50S ribosomal protein L16
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
T05A6.1 Aff_T05A6.1 P W All gene names: cki-1; T05A6.1; 2I101; CE03628;
NM_063240; WBGene00000516; WP:CE03628
WormBase description: cki-1 encodes a homolog of the
mammalian cyclin-dependent kinase inhibitor p27/KIP1
that is required for the arrest of cell division in
larval blast lineages, dauer larvae and starved L1
larvae; excess CKI-1 expression prematurely stops cell
division while cki-1(RNAi) induces extra cell
divisions, indicating that CKI-1 quantitatively
regulates the amount of mitosis in postembryonic worms.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order
T05G11.1 Aff_T05G11.1 P W All gene names: T05G11.1; 5Q408; CE18930;
WBGene00011505; WP:CE18930
WormBase description: Zinc finger, C2H2 (2 domains)
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, oogenesis enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, GO categories, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S6 removed genes of
contamination
T06E8.1 Aff_T06E8.1 P W All gene names: acl-2; T06E8.1; 5K510; CE06378;
NM_073177; WBGene00011543; WP:CE06378
WormBase description: T06E8.1 is orthologous to the
human gene 1-ACYLGLYCEROL-3-PHOSPHATE O-ACYLTRANSFERASE
2 (LYSOPHOSPHATIDIC ACID ACYLTRANSFERASE, BETA)
(AGPAT2; OMIM:603100), which when mutated leads to
disease; T06E8.1 protein is predicted to be
mitochondrial.
WormBase CDS description: 1-acyl-SN-glycerol-3-phophate
acyltransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
T06H11.4 Aff_T06H11.4 P W All gene names: moc-1; T06H11.4; CE31596; NM_077299;
WBGene00003384; WP:CE31596; XK756
WormBase description: moc-1 encodes an ortholog of
human GEPHYRIN (GPHN; OMIM:603930), which when mutated
leads to molybdenum cofactor (MoCo) deficiency; MOC-1
is also paralogous to LIN-46.
WormBase CDS description: gephyrin
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
T11F8.3 Aff_T11F8.3 P W All gene names: rme-2; T11F8.3; 4G237; CE22368;
NM_068414; WBGene00004374; WP:CE22368
WormBase description: LDL-like receptor
Member of lists (Publications lists):
Reinke et al 2004, Fig2b shared
gemlines, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, herm soma
enriched genes, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S6 removed genes of
contamination
T12A2.8 Aff_T12A2.8 P W All gene names: T12A2.8; T12A2.8.1; T12A2.8.2; 3H336;
CE01401; WBGene00020442; WP:CE01401
WormBase description: DNA repair protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
T12D8.8 Aff_T12D8.8 P W All gene names: T12D8.8; T12D8.8.1; T12D8.8.2;
T12D8.8.3; 3O704; CE16405; WBGene00011735; WP:CE16405
WormBase description: TPR Domain (2 domains)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
T12G3.4 Aff_T12G3.4 P W All gene names: T12G3.4; 4M813; CE06440;
WBGene00011739; WP:CE06440
WormBase description: strictosidine synthase like
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
T17E9.2 Aff_T17E9.2 P W All gene names: T17E9.2; T17E9.2c.1; T17E9.2c.2; 3H204;
CE01406; CE28669; CE31611; WBGene00020549; WP:CE01406;
WP:CE28669; WP:CE31611
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S4 Early genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
T20F7.1 Aff_T20F7.1 P W All gene names: T20F7.1; CE33698; WBGene00020630;
WP:CE33698; XR491
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen
T21B10.1 Aff_T21B10.1 P W All gene names: T21B10.1; 2J221; CE03683;
WBGene00011883; WP:CE03683
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
T21C9.2 Aff_T21C9.2 P W All gene names: vps-54; T21C9.2; 5L46; CE31365;
NM_073310; WBGene00006934; WP:CE31365
WormBase description: The vps-54 gene encodes an
ortholog of VPS54 in S. cerevisiae, a protein involved
in vacuolar trafficking.
WormBase CDS description: Zinc finger, C2H2 type
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma, Reinke et
al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
T23B12.2 Aff_T23B12.2 P W All gene names: T23B12.2; 5I949; CE14028;
WBGene00020717; WP:CE14028
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
T24D1.3 Aff_T24D1.3 P W All gene names: T24D1.3; 1K536; CE14166;
WBGene00011986; WP:CE14166
Member of lists (Publications lists):
Golden et al 2004, N2 vs daf-2
different genes at , Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
T25D3.2 Aff_T25D3.2 P W All gene names: T25D3.2; 2A446; CE19599;
WBGene00020796; WP:CE19599
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, Romagnolo et al 2002 Fig3b others,
ViswanathanM et al 2005 S2 sir-2.1 regulated
T27E9.4 Aff_T27E9.4 P W All gene names: kel-3; T27E9.4; T27E9.4a.1; T27E9.4a.2;
T27E9.4a.3; 3O559; CE29824; CE29825; NM_067383;
NM_067384; WBGene00002185; WP:CE29824; WP:CE29825
WormBase description: ring canal protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
W01A11.2 Aff_W01A11.2 P W All gene names: W01A11.2; 5G979; CE14392;
WBGene00020910; WP:CE14392
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
W05F2.3 Aff_W05F2.3 P W All gene names: W05F2.3; 1D936; CE14616;
WBGene00021035; WP:CE14616
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Jones et al 2001 T3 20 most abundant
Mixed-stage, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, Reinke et al 2004,
list of genes in cluster E, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S6 removed genes of
contamination
W08F4.3 Aff_W08F4.3 P W All gene names: W08F4.3; W08F4.3.1; W08F4.3.2; 2A871;
CE14716; WBGene00021093; WP:CE14716
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
W09B7.2 Aff_W09B7.B P W All gene names: W09B7.2; W09B7.B; 5J305; WBGene00021107
Y105E8B.5 Aff_Y105E8A.K P W All gene names: Y105E8B.5; 1P253; CE24099;
WBGene00013690; WP:CE24099
WormBase description: The Y105E8B.
Y106G6H.14 Aff_Y106G6H.14 P W All gene names: Y106G6H.14; 1L48; CE24111;
WBGene00013724; WP:CE24111
WormBase description: Src homology domain 3 ; Ank
repeat
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
Y17G9B.9 Aff_Y17G9B.A P W All gene names: Y17G9B.9; 4F524; CE24188;
WBGene00021206; WP:CE24188
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, list
of genes in cluster E, ViswanathanM et al 2005 S2
sir-2.1 regulated
Y24D9A.8 Aff_Y24D9A_29.F P W All gene names: Y24D9A.8; Y24D9A.8a.1; Y24D9A.8a.2;
Y24D9A.8a.3; Y24D9A.8b.1; Y24D9A.8b.2; 4F153; CE28974;
CE30402; WBGene00021286; WP:CE28974; WP:CE30402
WormBase description: Y24D9A.8 is orthologous to the
human gene TRANSALDOLASE 1 (TALDO1; OMIM:602063), which
when mutated leads to disease.
Y39E4B.5 Aff_Y39E4B.L P W All gene names: Y39E4B.5; Y39E4B.L; 3O261; CE21717;
WBGene00012716; WP:CE21717
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
Y40B10A.1 Aff_Y40B10A_106.C P W All gene names: lbp-9; Y40B10A.1; Y40B10A.1b.1;
Y40B10A.1b.2; 5C547; CE26077; CE39188; NM_071161;
WBGene00021486; WP:CE26077; WP:CE39188
Member of lists (Publications lists):
Reinke et al 2004, herm soma enriched
genes
Y45F10A.2 Aff_Y45F10A.2 P W All gene names: puf-3; Y45F10A.2; Y45F10A.2.1;
Y45F10A.2.2; 4O276; CE18393; NM_070205; WBGene00004239;
WP:CE18393
WormBase description: The puf-3 gene encodes a
predicted RNA binding protein that is a member of the
conserved PUF (Pumilio and FBF) family of RNA binding
proteins; PUF-3 is expressed in the ovary and is
required for multiple aspects of early embryogenesis
including proper cell cycle timing, spindle
positioning, and formation of the polar bodies and
pronuclei.
WormBase CDS description: Pumilio-family RNA binding
domains (aka PUM-HD, Pumilio homology domain)
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, Fig2b shared gemlines, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt males vs
glp4 male enriched , Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S6 removed genes of
contamination
Y46H3A.7 Aff_Y46H3A.H P W All gene names: Y46H3A.7; CE38646; WBGene00044344;
WP:CE38646
Y47G6A.20 Aff_Y47G6A_245.F P W All gene names: rnp-6; Y47G6A.20; 1E108; CE24365;
CE24366; CE31375; NM_058775; NM_058776; NM_170843;
WBGene00004389; WP:CE24365; WP:CE24366; WP:CE31375
WormBase description: rnp-6 encodes an ortholog of
HALF-PINT in D. melanogaster and FBP Interacting
Repressor (FIR)/PUF60 in mammals, predicted to be
involved in mRNA splicing regulation, mRNA
localization, or transcriptional regulation via TFIIH.
Y48B6A.13 Aff_Y48B6A.L P W All gene names: Y48B6A.13; Y48B6A.13b.1; Y48B6A.13b.2;
2O512; CE22128; CE22129; WBGene00012984; WP:CE22128;
WP:CE22129
Y50D7A.9 Aff_Y50D7_165.D P W All gene names: Y50D7A.9; 3A905; CE28994;
WBGene00021757; WP:CE28994
Member of lists (Publications lists):
Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
Y52B11A.2 Aff_Y52B11A.2 P W All gene names: Y52B11A.2; 1L558; CE20291; CE36243;
WBGene00013122; WP:CE20291; WP:CE36243
WormBase description: Uncharacterized protein family
UPF0029
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, oogenesis enriched genes, Reinke et al
2004, GO categories
Y53C12B.1 Aff_Y53C12B.1 P W All gene names: Y53C12B.1; 2K34; CE14894;
WBGene00013143; WP:CE14894
WormBase description: WD domain, G-beta repeats (4
domains)
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Wang et al 2003 S5 genes
common to feeding ANOVA, Wang et al 2003 S3 genes
pass one-way ANOVA
Y54E10A.7 Aff_Y54E10A_159.B P W All gene names: Y54E10A.7; Y54E10A_159.B; 1D731;
CE38572; WBGene00021829; WP:CE38572
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
Y54G2A.36 Aff_Y94H6A_148.S P W All gene names: Y54G2A.36; 4D661; CE34417;
WBGene00021898; WP:CE34417
Y57A10A.30 Aff_Y57A10A.JJ P W All gene names: ife-5; Y57A10A.30; Y57A10A.30b.1;
Y57A10A.30b.2; 2M573; CE22608; CE25509; NM_064207;
WBGene00002063; WP:CE22608; WP:CE25509
WormBase description: ife-5 encodes a member of the
Initiation Factor 4E (eIF4E) family; it is expressed in
the germ line.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, Fig2b shared gemlines, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , ViswanathanM et al 2005 S2
sir-2.1 regulated
Y66A7A.2 Aff_Y66A7A.2 P W All gene names: Y66A7A.2; 3M576; CE22751;
WBGene00013422; WP:CE22751
Y71F9AL.8 Aff_Y71F9A_294.E P W All gene names: Y71F9AL.8; 1D447; CE25560;
WBGene00022113; WP:CE25560
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
Y71F9AM.4 Aff_Y71F9A_269.A P W All gene names: cogc-3; mig-29; Y71F9AM.4; 1D513;
CE33242; CE37070; WBGene00022121; WP:CE33242;
WP:CE37070
Member of lists (Publications lists):
Wang et al 2003 S4 Early genes, Wang
et al 2003 S3 genes pass one-way ANOVA, Wang et al
2003 S4 genes pass two-wayANOVA P0
Y75B12B.2 Aff_Y75B12B.2 P W All gene names: cyn-7; cyp-7; Y75B12B.2; Y75B12B.2.1;
Y75B12B.2.2; Y75B12B.2.3; 5P666; CE20371; NM_074348;
WBGene00000883; WP:CE20371
WormBase description: cyp-7 encodes a cyclophilin A
isoform; while not tested peptidyl-prolyl isomerase
activity in vitro, it is very similar to CYP-3 and
closely resembles the prototypical CypA, and is
therefore likely to be a member of the cytosolic
CsA-binding cyclophilin subfamily; CYP-7 was required
for embryonic viability in one set of mass RNAi assays.
WormBase CDS description: Peptidyl-prolyl cis-trans
isomerases
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, ViswanathanM et al
2005 S2 sir-2.1 regulated
Y82E9BR.14 Aff_Y119D3_446.D P W All gene names: Y82E9BR.14; Y82E9BR.14a.1;
Y82E9BR.14a.2; 3C500; CE27038; CE34433; WBGene00022347;
WP:CE27038; WP:CE34433
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
ZK1098.4 Aff_ZK1098.4 P W All gene names: ZK1098.4; 3K633; CE00367;
WBGene00014221; WP:CE00367
WormBase description: GCN3 (yeast transcription
activator)
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Romagnolo et al 2002 Fig3b Protein Synthesis,
ViswanathanM et al 2005 S2 sir-2.1 regulated
ZK1236.1 Aff_ZK1236.1 P W All gene names: ZK1236.1; 3J519; CE01446;
WBGene00022862; WP:CE01446
WormBase description: homology with E.coli lepA protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
ZK1248.3 Aff_ZK1248.3 P W All gene names: ehs-1; ZK1248.3; 2G113; CE02903;
CE32289; NM_062754; WBGene00001224; WP:CE02903;
WP:CE32289
WormBase description: The ehs-1 gene encodes an
ortholog of mammalian EPS15 that probably functions in
endocytosis.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, mixed oogenesis soma, Reinke et al 2004, wt herm
vs wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated
ZK1307.5 Aff_ZK1307.5 P W All gene names: spe-2; sqv-8; ZK1307.5; 2J939; CE01694;
NM_063675; WBGene00005026; WP:CE01694
WormBase description: The sqv-8 gene encodes a
glucuronyl transferase, biochemically active in vitro,
that is required for cytokinesis of one-cell embryos
and for vulval morphogenesis; SQV-8 is homologous to
three distinct glucuronyl transferases (GlcAT-I,
GlcAT-P and GlcAT-D) that play a role in the synthesis
of different glycoconjugates; the common requirement
for SQV-8 in both cytokinesis and morphogenesis may be
to promote filling an extracellular space with
hygroscopic proteoglycans (either in the eggshell, or
underneath the L4 cuticle), which in turn may cause the
space to fill with fluid.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E
ZK829.5 Aff_ZK829.5 P W All gene names: tbx-36; ZK829.5; 4M717; CE06653;
NM_069865; WBGene00006555; WP:CE06653
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
ZK858.7 Aff_ZK858.7 P W All gene names: ZK858.7; 1J718; CE35204;
WBGene00014120; WP:CE35204
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
oogenesis enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated
