Gene name Source Gene ID Annotation Date Added by
AFF_C05C8.1 Aff_C05C8.1 P W
AFF_C06A1.4 Aff_C06A1.4 P W
AFF_C33A11.2 Aff_C33A11.2 P W
AFF_E01A2.I Aff_E01A2.I P W
AFF_F44A2.6 Aff_F44A2.6 P W
AFF_F49H12.D Aff_F49H12.D P W
AFF_F58E10.1 Aff_F58E10.1 P W
AFF_Y41D4A_3457.B Aff_Y41D4A_3457.B P W
AFF_Y53G8B_93.B Aff_Y53G8B_93.B P W
AFF_Y57E12_242.A Aff_Y57E12_242.A P W
AFF_Y73F8A.AA Aff_Y73F8A.AA P W
AFF_ZK546.13 Aff_ZK546.13 P W
AH6.5 Aff_AH6.5 P W All gene names: mex-6; AH6.5; 2J815; CE26846;
NM_063642; WBGene00003231; WP:CE26846
WormBase description: mex-6 encodes a CCCH zinc-finger
protein highly similar to MEX-5 that functions with
MEX-5 to affect embryonic viability, establish soma
germline asymmetry in embryos and establish PIE-1,
MEX-1, and POS-1 asymmetry in embryos, and also affects
formation of intestinal cells; MEX-6 and MEX-5 may act
downstream of the PAR proteins.
WormBase CDS description: zinc finger protein
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0035.14 Aff_B0035.14 P W All gene names: dnj-1; B0035.14; 4M69; CE05169;
NM_069721; WBGene00001019; WP:CE05169
WormBase description: This gene encodes a protein
containing a DnaJ ('J') domain.
WormBase CDS description: DNAJ protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0207.6 Aff_B0207.6 P W All gene names: B0207.6; 1G512; CE30229;
WBGene00015029; WP:CE30229
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0213.3 Aff_B0213.3 P W All gene names: nlp-28; B0213.3; 5E463; CE16774;
NM_071709; WBGene00003766; WP:CE16774
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S6 removed genes of
contamination
B0238.10 Aff_B0238.10 P W All gene names: B0238.10; 5F753; CE07700;
WBGene00015074; WP:CE07700
WormBase description: acyltransfersase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster E
B0304.2 Aff_B0304.2 P W All gene names: B0304.2; 2E815; CE02424;
WBGene00015134; WP:CE02424
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0334.11 Aff_B0334.11 P W All gene names: mel-19; ooc-3; B0334.11; 2L784;
CE19661; CE32788; NM_064055; NM_182110; WBGene00003868;
WP:CE19661; WP:CE32788
WormBase description: ooc-3 encodes a nematode-specific
protein with a predicted signal sequence, four
predicted transmembrane domains, and two putative PEST
sequences; OOC-3 is probably localized to the
endoplasmic reticulum (ER), and is maternally required
for correct localization of PAR-2 and PAR-3 in the P1
blastomere of the two-cell stage embryo; specifically,
OOC-3 is required for restricting PAR-3 to the anterior
cortex of the P1 blastomere to assure PAR-2
localization at the posterior cortex; more generally,
OOC-3 is required to establish asymmetrical
anterior-posterior cortical domains and spindle
orientation in P1.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0334.4 Aff_B0334.4 P W All gene names: B0334.4; 2L787; CE02936;
WBGene00007144; WP:CE02936
WormBase description: Yeast hypothetical protein
L8167.12 like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0393.6 Aff_B0393.6 P W All gene names: B0393.6; 3F870; CE33964;
WBGene00007171; WP:CE33964
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0464.4 Aff_B0464.4 P W All gene names: bre-3; B0464.4; B0464.4.1; B0464.4.2;
3K560; CE33592; NM_066686; WBGene00000268; WP:CE33592
WormBase description: bre-3 encodes a protein similar
to beta-glycosyltransferases from bacteria that is
required for the toxicity of Bacillus thuringiensis
Cry5B; BRE-3 may act in a pathway with bre-5 and is
expressed and functions in the gut epithelium.
WormBase CDS description: zw4
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0511.12 Aff_B0511.12 P W All gene names: B0511.12; 1L232; CE28877;
WBGene00015237; WP:CE28877
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, mixed oogenesis soma, ViswanathanM
et al 2005 S2 sir-2.1 regulated
B0547.1 Aff_B0547.1 P W All gene names: csn-5; B0547.1; B0547.1.1; B0547.1.2;
4G415; CE06722; NM_068440; WBGene00000817; WP:CE06722
WormBase description: csn-5 encodes an ortholog of
subunit 5 of the COP9 signalosome complex (CSN5), which
in turn is a pan-eukaryotic multiprotein complex that
positively regulates E3 ubiquitin ligases, physically
interacts with SCF-type E3 ubiquitin ligases, and
probably regulates protein degradation; CSN-5 (along
with KGB-1 and ZYX-1) physically binds germline RNA
helicases (GLH proteins), and csn-5(RNAi) results in
sterile worms with small gonads and no oocytes, causing
oogenesis to cease, but not affecting the initial
assembly of P granules -- a defect essentially
identical to that produced by RNAi with a combination
of glh-1 and glh-4.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
C01F6.8 Aff_C01F6.8 P W All gene names: icl-1; C01F6.8; 4J860; CE17360;
CE30069; ICln; WBGene00002046; WP:CE17360; WP:CE30069
WormBase description: The icl-1 gene encodes, through
alternative splicing, two alternative forms (ICL-1A, or
'IClnN1', and ICL-1B, or 'IClnN2'), with distinct
electrophysiological properties, of an anion channel
homolog.
WormBase CDS description: nucleotide-sensitive chloride
ion channel
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Romagnolo et
al 2002 Fig3b Transporters, ViswanathanM et al 2005
S2 sir-2.1 regulated
C01G10.7 Aff_C01G10.7 P W All gene names: C01G10.7; 5P567; CE07816;
WBGene00007234; WP:CE07816
WormBase description: citrate lyase beta chain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, ViswanathanM et al
2005 S2 sir-2.1 regulated
C01G5.2 Aff_C01G5.2 P W All gene names: tag-292; C01G5.2; 4H292; CE06748;
WBGene00015304; WP:CE06748
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C01G6.4 Aff_C01G6.4 P W All gene names: C01G6.4; 2J562; CE00866;
WBGene00007226; WP:CE00866
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C02B10.1 Aff_C02B10.1 P W All gene names: C02B10.1; 4F852; CE16798; IVD;
WBGene00015326; WP:CE16798
WormBase description: The C02B10.1 gene encodes an
isovaleryl-CoA dehydrogenase; this function has been
verified by both sequence homology and direct
biochemical assay.
WormBase CDS description: acyl-CoA dehydrogenase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C02B10.2 Aff_C02B10.2 P W All gene names: C02B10.2; 4F854; CE24776;
WBGene00015327; WP:CE24776
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C03E10.4 Aff_C03E10.4 P W All gene names: gly-20; C03E10.4; 5L765; CE26613; GnT
II; MGAT2; NM_073463; WBGene00001645; WP:CE26613
WormBase description: gly-20 is orthologous to the
human gene MANNOSYL (ALPHA-1,6-)-GLYCOPROTEIN
BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE (MGAT2;
OMIM:602616), which when mutated leads to
carbohydrate-deficient glycoprotein syndrome, type II.
WormBase CDS description: UDP-GlcNAc:a-6-D-mannoside
b1,2-N-acetylglucosaminyltransferase II
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C04B4.2 Aff_C04B4.2 P W All gene names: C04B4.2; CE05204; WBGene00007290;
WP:CE05204; XM903
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C04F5.9 Aff_C04F5.9 P W All gene names: C04F5.9; 5F594; CE19673;
WBGene00015451; WP:CE19673
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C04G6.4 Aff_C04G6.4 P W All gene names: C04G6.4; 2F372; CE32112;
WBGene00015454; WP:CE32112
WormBase description: salt-stress induced peptide
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
C05C10.6 Aff_C05C10.6 P W All gene names: C05C10.6; CE02113; CE27796;
WBGene00007333; WP:CE02113; WP:CE27796
WormBase description: phospholipase activating protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen
C06A1.1 Aff_C06A1.1 P W All gene names: cdc-48.1; phi-31; C06A1.1; 2K850;
CE02114; NM_063872; WBGene00007352; WP:CE02114
WormBase description: transitional endoplasmic
reticulum ATPase homolog 1 (P97 protein)
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, GO categories,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C06A5.6 Aff_C06A5.6 P W All gene names: C06A5.6; 1G560; CE07953;
WBGene00015504; WP:CE07953
Member of lists (Publications lists):
Reinke et al 2004, Fig2b shared
gemlines, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
C06A8.4 Aff_C06A8.4 P W All gene names: skr-17; C06A8.4; 2I75; CE02455;
NM_063237; WBGene00004823; WP:CE02455
WormBase description: skr-17 encodes a homolog of Skp1
in S. cerevisiae, a core component of the SCF (Skp1p,
Cullin, F-box) ubiquitin-ligase complex that
facilitates ubiquitin-mediated protein degradation;
SKR-17 has no known function in vivo, since
skr-17(RNAi) animals are at least superficially normal,
and SKR-17 does not appear to interact in vitro with
any of the C. elegans cullin homologs.
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C06E7.3 Aff_C06E7.3 P W All gene names: C06E7.3; C06E7.3b.1; C06E7.3b.2;
C06E7.3b.3; C06E7.3b.4; 4G610; CE03959; CE33517;
WBGene00015540; WP:CE03959; WP:CE33517
WormBase description: S-adenosylmethionine synthetase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C07G1.5 Aff_C07G1.5 P W All gene names: hgrs-1; pqn-9; C07G1.5; 4I966; CE32574;
NM_068974; WBGene00004101; WP:CE32574
WormBase description: The protein product of this gene
is predicted to contain a glutamine/asparagine
(Q/N)-rich ('prion') domain, by the algorithm of
Michelitsch and Weissman (as of the WS77 release of
WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C07H4.2 Aff_C07H4.2 P W All gene names: clh-5; C07H4.2; C07H4.2.1; C07H4.2.2;
2J386; CE27360; NM_063539; WBGene00000532; WP:CE27360
WormBase description: The clh-5 gene encodes a chloride
channel, whose human homologs include CLC1 and CLCN5;
the latter homolog is imvolved in receptor-mediated
endocytosis.
WormBase CDS description: chloride channel protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, ViswanathanM et al
2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2
daf-16 Resveratrol
C08B11.1 Aff_C08B11.1 P W All gene names: zyg-11; C08B11.1; 2I309; CE01471;
NM_063276; WBGene00006996; WP:CE01471
WormBase description: Leucine Rich Repeat (2 copies)
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, mixed oogenesis soma, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S6 removed genes of
contamination
C08C3.4 Aff_C08C3.4 P W All gene names: C08C3.4; 3I884; CE00069; CE39671;
WBGene00015591; WP:CE00069; WP:CE39671
C08F8.2 Aff_C08F8.2 P W All gene names: C08F8.2; C08F8.2b.1; C08F8.2b.2; 4L917;
CE05249; CE19689; WBGene00007444; WP:CE05249;
WP:CE19689
WormBase description: ATP-dependent RNA helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, GO
categories
C09F5.2 Aff_C09F5.2 P W All gene names: C09F5.2; 3B271; CE01774;
WBGene00015648; WP:CE01774
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
C09G4.1 Aff_C09G4.1 P W All gene names: LAG1-1; hyl-1; C09G4.1; C09G4.1.1;
C09G4.1.2; 4J307; CE27675; NM_069058; WBGene00002043;
WP:CE27675
WormBase description: hyl-1 encodes a predicted
transmembrane protein that is related to Saccharomyces
cerevisiae LAG1 (longevity assurance gene), a protein
preferentially expressed in young yeasts; by homology,
HYL-1 is predicted to have several possible functions,
including regulation of lipid, particularly ceramide,
biosynthesis, regulation of lipid transport, and
regulation of protein translocation in the endoplasmic
reticulum; in C. elegans, however, neither the precise
role of HYL-1 in development and/or behavior nor the
hyl-1 expression pattern is yet known.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
C09G9.6 Aff_C09G9.6 P W All gene names: moe-1; oma-1; C09G9.6; C09G9.6.1;
C09G9.6.2; 4J655; CE03005; NM_069141; WBGene00003864;
WP:CE03005
WormBase description: The oma-1 gene encodes a zinc
finger protein of the TIS11 finger type that is
paralogous to OMA-2; while either oma-1 or oma-2
individually have no obvious mutant phenotype, a normal
copy of at least one of these genes is required for
oocyte maturation.
WormBase CDS description: Zinc finger protein
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, GO categories,
Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S6 removed genes of contamination
C12D8.11 Aff_C12D8.11 P W All gene names: rop-1; C12D8.11; C12D8.11.1;
C12D8.11.2; 5K734; CE15613; NM_073237; WBGene00004405;
WP:CE15613; rop1
WormBase description: ROP-1 ribonucleoprotein RO
autoantigen
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C13B9.3 Aff_C13B9.3 P W All gene names: phi-30; C13B9.3; 3H712; CE01778;
WBGene00015734; WP:CE01778
WormBase description: C13B9.3 encodes a delta subunit
of the coatomer (COPI) complex; in mass RNAi assays,
C13B9.3 is required for fertility and general health.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S4 Early genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
C14A11.6 Aff_C14A11.6 P W All gene names: C14A11.6; CE08154; WBGene00015751;
WP:CE08154; XD426
C14C11.6 Aff_C14C11.6 P W All gene names: mut-14; C14C11.6; 5G140; CE06825;
NM_072089; WBGene00003507; WP:CE06825
WormBase description: mut-14 mutants exhibit germline
transposon activation, a deficient response to RNAi,
resistance to co-suppression, and transgene
desilencing.
WormBase CDS description: helicase
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated
C14F11.1 Aff_C14F11.1 P W All gene names: C14F11.1; C14F11.1b.1; C14F11.1b.2;
CE02477; CE30862; WBGene00015778; WP:CE02477;
WP:CE30862; XG861
WormBase description: Aspartate aminotransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C15H11.4 Aff_C15H11.4 P W All gene names: dhs-22; C15H11.4; 5O900; CE08181;
NM_074169; WBGene00000985; WP:CE08181
WormBase description: dhs-22 encodes a short-chain
dehydrogenase predicted to be mitochondrial.
WormBase CDS description: dehydrogenase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated
C15H11.6 Aff_C15H11.6 P W All gene names: nxf-2; C15H11.6; 5O896; CE36102;
NM_074167; WBGene00003835; WP:CE36102
WormBase description: nxf-2 encodes a predicted homolog
of human TAP protein, a member of the NXF family of
shuttling transport receptors for nuclear export of
mRNA, and it affects embryonic viability.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C16A11.4 Aff_C16A11.4 P W All gene names: C16A11.4; 2E519; CE34688;
WBGene00015817; WP:CE34688
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, GO categories, Reinke et al 2004, IVb male soma
enriched genes
C16A3.2 Aff_C16A3.2 P W All gene names: C16A3.2; 3H479; CE08188;
WBGene00015807; WP:CE08188
WormBase description: protein-tyrosine phosphatase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, GO categories, Reinke et al 2004, IVb male
soma enriched genes, ViswanathanM et al 2005 S2
sir-2.1 regulated
C16C10.1 Aff_C16C10.1 P W All gene names: C16C10.1; C16C10.1.1; C16C10.1.2;
3F270; CE33519; WBGene00007622; WP:CE33519
WormBase description: carrier protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, GO categories,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C16C8.12 Aff_C16C8.12 P W All gene names: C16C8.12; 2D745; CE34693;
WBGene00015850; WP:CE34693
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, ViswanathanM
et al 2005 S2 sir-2.1 regulated
C17G10.2 Aff_C17G10.2 P W All gene names: C17G10.2; 2F885; CE29583;
WBGene00015916; WP:CE29583
WormBase description: TPR domain
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Wang et al
2003 S5 genes common to feeding ANOVA, Wang et al 2003
S3 genes pass one-way ANOVA
C18E9.6 Aff_C18E9.6 P W All gene names: C18E9.6; 2J262; CE05298;
WBGene00007686; WP:CE05298
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes
common to feeding ANOVA, Wang et al 2003 S3 genes
pass one-way ANOVA
C18G1.5 Aff_C18G1.5 P W All gene names: hil-4; C18G1.5; C18G1.5.1; C18G1.5.2;
H1.4; 5F233; CE17421; NM_071876; WBGene00001855;
WP:CE17421
WormBase description: histone H1
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, GO categories,
Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C26E6.5 Aff_C26E6.5 P W All gene names: fsn-1; C26E6.5; 3G27; CE01163;
NM_065645; WBGene00001499; WBGene00016141; WP:CE01163
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C27A7.6 Aff_C27A7.6 P W All gene names: C27A7.6; 5M604; CE08409;
WBGene00007757; WP:CE08409
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C27D6.4 Aff_C27D6.5 P W All gene names: C27D6.4; C27D6.4b.1; C27D6.4b.2; 2F468;
CE32146; CE32147; CE32148; WBGene00016162; WP:CE32146;
WP:CE32147; WP:CE32148
WormBase description: BZIP protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 TransientList, Wang et al 2003 S3 genes
pass one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C27D9.1 Aff_C27D9.1 P W All gene names: C27D9.1; 2F45; CE06891; WBGene00016163;
WP:CE06891
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
C28D4.2 Aff_C28D4.2 P W All gene names: cka-1; C28D4.2; 4K498; CE20533;
NM_069331; WBGene00000509; WP:CE20533
WormBase description: choline kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
C29E4.8 Aff_C29E4.8 P W All gene names: C29E4.8; C29E4.8.1; C29E4.8.2; 3J40;
CE29198; WBGene00016205; WP:CE29198
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: Adenylate kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S4 Climbing, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
C30F12.4 Aff_C30F12.4 P W All gene names: C30F12.4; 1H548; CE16884;
WBGene00016263; WP:CE16884
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C30H6.9 Aff_C30H6.9 P W All gene names: C30H6.9; 4S322; CE19707;
WBGene00007826; WP:CE19707
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
C31H1.8 Aff_C31H1.8 P W All gene names: C31H1.8; 4G576; CE27808;
WBGene00016291; WP:CE27808
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C33F10.4 Aff_C33F10.4 P W All gene names: C33F10.4; 2F87; CE02530; CE02531;
CE27103; WBGene00016353; WP:CE02530; WP:CE02531;
WP:CE27103
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
C34C12.8 Aff_C34C12.8 P W All gene names: C34C12.8; 3E551; CE03057;
WBGene00007927; WP:CE03057
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: GRPE protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S5 genes common to feeding ANOVA, Wang
et al 2003 S3 genes pass one-way ANOVA
C34D4.4 Aff_C34D4.4 P W All gene names: C34D4.4; 4H913; CE06925; CE39683;
WBGene00016400; WP:CE06925; WP:CE39683
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C34G6.7 Aff_C34G6.7 P W All gene names: pqn-19; C34G6.7; C34G6.7a.1;
C34G6.7a.2; C34G6.7b.1; C34G6.7b.2; 1G480; CE29700;
CE32816; NM_059309; NM_182013; WBGene00004109;
WP:CE29700; WP:CE32816
WormBase description: The protein product of this gene
is predicted to contain a glutamine/asparagine
(Q/N)-rich ('prion') domain, by the algorithm of
Michelitsch and Weissman (as of the WS77 release of
WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C35B8.3 Aff_C35B8.3 P W All gene names: C35B8.3; C35B8.3a.1; C35B8.3a.2;
CE02536; CE27827; WBGene00016438; WP:CE02536;
WP:CE27827; XJ835
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, herm soma
enriched genes, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C35D10.9 Aff_C35D10.9 P W All gene names: ced-4; C35D10.9; 3F943; CE01203;
CE38154; WBGene00000418; WP:CE01203; WP:CE38154
WormBase description: ced-4 encodes a novel protein;
along with CED-3, CED-4 is required for the initiation
of programmed cell death; accordingly, genetic analyses
indicate that ced-3 and ced-4 function upstream of
ced-1, ced-2, and nuc-1 in the programmed cell death
pathway; in yeast two-hybrid experiments, and upon
coexpression in mammalian cells, CED-4 interacts with
CED-9, an anti-apoptotic BCL-2 homolog; coexpression of
CED-4 and CED-9 results in redistribution of CED-4 from
the cytosol to organellar membranes, suggesting that
CED-9 may negatively regulate CED-4 activity by
sequestering CED-4 to intracellular membranes.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C36A4.4 Aff_C36A4.4 P W All gene names: C36A4.4; C36A4.4.1; C36A4.4.2; 3E932;
CE27831; WBGene00007965; WP:CE27831
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated
C36A4.9 Aff_C36A4.9 P W All gene names: C36A4.9; C36A4.9a.1; C36A4.9a.2;
C36A4.9a.3; 3E955; CE03076; CE37209; WBGene00007969;
WP:CE03076; WP:CE37209
WormBase description: acetyl-coenzyme A synthetase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Shen et al 2005 T1 hif-1 depend hypoxia,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C36F7.2 Aff_C36F7.2 P W All gene names: C36F7.2; 1K133; CE24828;
WBGene00007985; WP:CE24828
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C37H5.3 Aff_C37H5.3 P W All gene names: C37H5.3; 5F325; CE08627; CE32824;
WBGene00016507; WP:CE08627; WP:CE32824
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem3 enriched genes, Reinke
et al 2004, IVb male soma enriched genes, Reinke et al
2004, mixed sperm soma, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0, Wang et al 2003 S4 Dauer Enriched
C38D4.6 Aff_C38D4.6 P W All gene names: ceh-3; nob-2; pal-1; C38D4.6;
C38D4.6a.1; C38D4.6a.2; C38D4.6b.1; C38D4.6b.2; 3F896;
CE05383; CE27837; NM_065590; WBGene00003912;
WP:CE05383; WP:CE27837
WormBase description: pal-1 encodes a homeodomain
protein that is the C. elegans Caudal ortholog; PAL-1
is required maternally and embryonically for cell fate
specification and posterior patterning during
embryogenesis; PAL-1 is also required postembryonically
for fate specification of the posterior V6
neuroectoblast during male tail development; PAL-1 is
expressed in posterior blastomeres beginning at the
four-cell stage of embryogenesis and its expression
continues during embryogenesis in posterior-derived
tissues and cells undergoing movement or forming
midline structures; pal-1 is subject to both
transcriptional and translational regulation.
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes,
Jones et al 2001 Non dauer genes P<0.05, McCarroll et
al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al
2004, fem1 enriched genes, Reinke et al 2004, list of
genes in cluster order, Reinke et al 2004, oogenesis
enriched genes, Reinke et al 2004, wt vs glp-4 enriched
genes, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, list of genes in cluster E
C42C1.16 Aff_C42C1.10 P W All gene names: C42C1.16; 4N49; CE29223;
WBGene00016593; WP:CE29223
C45G9.2 Aff_C45G9.2 P W All gene names: C45G9.2; 3G159; CE29722;
WBGene00016674; WP:CE29722
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, list of genes in
cluster E, Romagnolo et al 2002 Fig3b Unkown,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C46H3.2 Aff_C46H3.2 P W All gene names: C46H3.2; C46H3.2b.1; C46H3.2b.2;
CE29228; CE33921; WBGene00016725; WP:CE29228;
WP:CE33921; XB832
WormBase description: tyrosine-protein kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C48B4.8 Aff_C48B4.8 P W All gene names: C48B4.8; 3K650; CE00484;
WBGene00008171; WP:CE00484
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C48B4.9 Aff_C48B4.9 P W All gene names: C48B4.9; 3K652; CE00485;
WBGene00008172; WP:CE00485
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, IVb male soma enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
C50B8.1 Aff_C50B8.1 P W All gene names: C50B8.1; C50B8.1.1; C50B8.1.2; 5O47;
CE08881; WBGene00008224; WP:CE08881
WormBase description: RNA binding protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C50B8.2 Aff_C50B8.2 P W All gene names: bir-2; C50B8.2; 5O49; CE08882;
NM_073961; WBGene00000250; WP:CE08882
WormBase description: The bir-2 gene encodes a protein
with two BIR domains that may be involved in apoptosis.
WormBase CDS description: Inhibitor of Apoptosis
domain.
Member of lists (Publications lists):
McElwee et al 2003 T1 targets of
daf-16, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, Fig2b shared gemlines, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004,
oogenesis enriched genes, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt males vs
glp4 male enriched , Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C50F4.16 Aff_C50F4.11 P W All gene names: C50F4.16; C50F4.16.1; C50F4.16.2; 5K18;
CE28213; WBGene00008238; WP:CE28213
WormBase description: The C50F4.16 gene encodes a NUDIX
hydrolase.
C52B11.3 Aff_C52B11.3 P W All gene names: dop-4; C52B11.3; CE39139;
WBGene00016872; WP:CE39139; XB915
WormBase description: G-protein coupled receptor
C52E4.4 Aff_C52E4.4 P W All gene names: rpt-1; C52E4.4; C52E4.4.1; C52E4.4.2;
C52E4.4.3; 5M462; CE08946; NM_073604; WBGene00004501;
WP:CE08946
WormBase description: rpt-1 encodes a predicted ATPase
subunit of the 19S regulatory complex of the proteasome
that affects fertility and embryonic viability.
WormBase CDS description: 26S protease regulatory
subunit 7
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
C53A5.2 Aff_C53A5.2 P W All gene names: C53A5.2; 5P0; CE17599; WBGene00008263;
WP:CE17599
WormBase description: Neurospora met-10 protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C53D6.4 Aff_C53D6.4 P W All gene names: C53D6.4; 4J784; CE36284;
WBGene00008281; WP:CE36284
WormBase description: angiotensin receptor like
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated
C55B7.11 Aff_C55B7.11 P W All gene names: C55B7.11; 1H88; CE09022;
WBGene00016947; WP:CE09022
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C55C3.5 Aff_C55C3.5 P W All gene names: C55C3.5; 4G462; CE29735;
WBGene00016955; WP:CE29735
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C56A3.6 Aff_C56A3.6 P W All gene names: C56A3.6; 5O34; CE32339; WBGene00008345;
WP:CE32339
WormBase description: EF hand (2 domains)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C56G2.6 Aff_C56G2.6 P W All gene names: dhs-10; let-767; C56G2.6; C56G2.6.1;
C56G2.6.2; 3H428; CE30639; NM_065985; WBGene00002891;
WP:CE30639
WormBase description: let-767 encodes a short-chain
dehydrogenase, reported to be required for efficient
cholesterol metabolism; LET-767 is predicted to be
required for the metabolism of a sterol and to be
mitochondrial.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S4 Climbing, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
CD4.4 Aff_CD4.4 P W All gene names: CD4.4; 5G71; CE16952; WBGene00016990;
WP:CE16952
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
D1007.10 Aff_D1007.10 P W All gene names: D1007.10; 1F157; CE09045; CE34282;
CE36921; WBGene00017007; WP:CE09045; WP:CE34282;
WP:CE36921
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
D1014.2 Aff_D1014.2 P W All gene names: SRQ-5; D1014.2; 5I625; CE07004;
WBGene00017015; WP:CE07004
D1054.2 Aff_D1054.2 P W All gene names: pas-2; tag-166; D1054.2; 5L251;
CE05521; NM_073349; WBGene00003923; WP:CE05521
WormBase description: pas-2 encodes a proteasome
subunit with highest similarity to vertebrate
proteasome alpha 2 subunits.
WormBase CDS description: proteasome component C3
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, ViswanathanM et al 2005
S2 sir-2.1 regulated
D1086.4 Aff_D1086.4 P W All gene names: D1086.4; 5O571; CE09062;
WBGene00008391; WP:CE09062
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, herm soma enriched genes, Reinke et al 2004, list
of genes in cluster E, ViswanathanM et al 2005 S2
sir-2.1 regulated
D2013.6 Aff_D2013.6 P W All gene names: D2013.6; 2J621; CE00931;
WBGene00008404; WP:CE00931
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
D2021.2 Aff_D2021.2 P W All gene names: tag-233; D2021.2; CE34286; CE34287;
WBGene00017047; WBGene00044071; WP:CE34286; WP:CE34287;
XJ173
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
D2024.6 Aff_D2024.6 P W All gene names: cap-1; D2024.6; D2024.6.1; D2024.6.2;
4H994; CAPZ/A; CE04295; NM_068744; WBGene00000292;
WP:CE04295
WormBase description: cap-1 encodes an F-actin capping
protein alpha subunit that affects fertility; likely
expressed in touch receptor neurons.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
D2030.5 Aff_D2030.5 P W All gene names: mce-1; D2030.5; 1I159; CE09082;
WBGene00008415; WP:CE09082
WormBase description: B.subtilis YQJC protein like
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
D2030.7 Aff_D2030.7 P W All gene names: D2030.7; D2030.7.1; D2030.7.2; 1I165;
CE30270; WBGene00008417; WP:CE30270
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S6 removed genes of
contamination
D2063.3 Aff_D2063.A P W All gene names: D2063.3; 5E818; CE29745; CE36922;
WBGene00017062; WP:CE29745; WP:CE36922
D2089.3 Aff_D2089.3 P W All gene names: D2089.3; 2K952; CE00938;
WBGene00008434; WP:CE00938
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
E02H1.5 Aff_E02H1.5 P W All gene names: E02H1.5; 2J885; CE01540;
WBGene00008457; WP:CE01540
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated
EEED8.10 Aff_EEED8.10 P W All gene names: EEED8.10; 2F686; CE39344;
WBGene00017138; WP:CE39344
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
WormBase CDS description: Probable RNA binding protein.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F01F1.8 Aff_F01F1.8 P W All gene names: cct-6; F01F1.8; F01F1.8a.1; F01F1.8a.2;
F01F1.8b.1; F01F1.8b.2; F01F1.8b.3; 3G944; CE01234;
CE30647; NM_171135; NM_171136; WBGene00000381;
WP:CE01234; WP:CE30647
WormBase description: eukaryotic cytosolic chaperonin;
affects viability and fertility, and is expressed in
various muscle and neuronal cells: near the pharynx,
near the anal sphincter, in the ventral nerve cord and
the nerve ring; occasionally the expression is visible
in hypodermal cells and in some vulval cells.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, ViswanathanM et al 2005
S2 sir-2.1 regulated
F02D10.6 Aff_F02D10.6 P W All gene names: F02D10.6; CE03141; WBGene00008526;
WP:CE03141; XO70
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F02E8.3 Aff_F02E8.3 P W All gene names: aps-2; F02E8.3; CE07018; NM_076366;
WBGene00000157; WP:CE07018; XF77
WormBase description: The aps-2 gene encodes an
adaptin: specifically, it encodes an ortholog of the
sigma2 subunit of adaptor protein complex 2 (AP-2),
which mediates endocytosis from the plasma membrane;
APS-2 appears to be required for embryonic and larval
development and for normal body morphology, but is not
required for endocytosis of yolk protein in developing
oocytes; APS-2 is expressed in nearly all cells during
embryogenesis, but during larval and adult stages,
expression is confined to neurons and some hypodermal
cells, including vulval hypodermal cells during the
fourth larval stage.
WormBase CDS description: Clathrin coat assembly
protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S5 genes common to feeding ANOVA, Wang
et al 2003 S3 genes pass one-way ANOVA
F02E8.4 Aff_F02E8.4 P W All gene names: F02E8.4; CE07019; WBGene00017177;
WP:CE07019; XF75
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
F02E9.5 Aff_F02E9.5 P W All gene names: F02E9.5; 1J2; CE23628; WBGene00008530;
WP:CE23628
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
F02H6.4 Aff_F02H6.4 P W All gene names: F02H6.4; 4O981; CE17628;
WBGene00008537; WP:CE17628
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F07H5.10 Aff_F07H5.10 P W All gene names: F07H5.10; 2J98; CE28906;
WBGene00008561; WP:CE28906
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2
daf-16 Resveratrol
F08F3.2 Aff_F08F3.2 P W All gene names: acl-6; F08F3.2; F08F3.2a.1; F08F3.2a.2;
5F913; CE09258; CE35851; WBGene00017261; WP:CE09258;
WP:CE35851
WormBase description: glycerol-3-phosphate
acyltransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F08F8.2 Aff_F08F8.2 P W All gene names: F08F8.2; 3I451; CE30649;
WBGene00017268; WP:CE30649
WormBase description: Hydroxymethylglutaryl-coA
reductase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
F08G2.4 Aff_F08G2.4 P W All gene names: F08G2.4; 2O121; 2O123; CE19776;
WBGene00008576; WP:CE19776
Member of lists (Publications lists):
Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang
et al 2003 S4 genes pass two-wayANOVA P0
F09E5.13 Aff_F09E5.13 P W All gene names: agt-2; cAGT-2; F09E5.13; 2F660;
CE02608; NM_062607; WBGene00000094; WP:CE02608
WormBase description: agt-2 encodes a paralog of the
DNA repair enzyme O6-Alkylguanine DNA-alkyltransferase
(AGT); AGT-2 has AGT biochemical activity and is
expressed at all developmental stages.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F09E5.7 Aff_F09E5.7 P W All gene names: F09E5.7; F09E5.7.1; F09E5.7.2; 2F643;
CE02614; WBGene00017285; WP:CE02614
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F09E8.3 Aff_F09E8.3 P W All gene names: msh-5; F09E8.3; 4N927; CE26678;
NM_070130; WBGene00003421; WP:CE26678
WormBase description: msh-5 encodes a germline-specific
homolog of the yeast and mammalian DNA mismatch repair
protein MSH5 (MutS-family) that is required for
crossing over and chiasma formation during
Caenorhabditis elegans meiosis; inactivation of both
rad-51 and msh-5 induces chromosome fragmentation, not
seen with inactivation of either gene alone.
WormBase CDS description: Yeast DNA mismatch repair
protein MSH5 like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
F, Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated
F10G7.9 Aff_F10G7.9 P W All gene names: F10G7.9; F10G7.9b.1; F10G7.9b.2; 2E994;
CE32371; CE32372; WBGene00017372; WP:CE32371;
WP:CE32372
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
F11A10.5 Aff_F11A10.5 P W All gene names: F11A10.5; 4M859; CE03185;
WBGene00008686; WP:CE03185
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, ViswanathanM et al
2005 S2 sir-2.1 regulated
F11G11.7 Aff_F11G11.7 P W All gene names: dnj-9; F11G11.7; 2F149; CE07060;
NM_062471; WBGene00001027; WP:CE07060
WormBase description: This gene encodes a protein
containing a DnaJ ('J') domain.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, herm soma
enriched genes, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F12F6.6 Aff_F12F6.6 P W All gene names: sec-24.1; F12F6.6; 4M328; CE05594;
NM_069777; WBGene00004755; WP:CE05594
WormBase description: sec-24.1 encodes one of two C.
elegans Sec24 homologs; in Saccharomyces cerevisiae,
Sec24 is a member of the Sec24-Sec23 subunit of the
COPII coat complex, assembly of which is essential for
the first step of secretory protein transport from the
endoplasmic reticulum (ER) to the Golgi; by homology
with Sec24, SEC-24.1 is predicted to facilitate vesicle
cargo selection, and likely contains multiple,
independent sites for binding to secreted proteins;
loss of sec-24.1 activity via RNAi indicates that
SEC-24.1 is required for cuticle secretion and
oogenesis.
WormBase CDS description: Yeast hypothetical YIK9
protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
F13B9.8 Aff_F13B9.8 P W All gene names: fis-2; F13B9.8; CE04385; CE37102;
WBGene00001425; WP:CE04385; WP:CE37102; XI900
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F13D12.2 Aff_F13D12.2 P W All gene names: ldh-1; F13D12.2; 2M15; CE02181; LDH;
NM_064102; WBGene00002262; WP:CE02181
WormBase description: ldh-1 is orthologous to the human
gene LACTATE DEHYDROGENASE B (LDHB; OMIM:150100), which
when mutated leads to lactate dehydrogenase-B
deficiency.
WormBase CDS description: L-lactate dehydrogenase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S4 Early genes,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0
F13G3.4 Aff_F13G3.4 P W All gene names: dylt-1; F13G3.4; 1H876; CE17659;
NM_059662; WBGene00008764; WP:CE17659
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, Romagnolo et al 2002 Fig3b others,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F13H10.4 Aff_F13H10.4 P W All gene names: F13H10.4; 4L782; CE05625;
WBGene00008775; WP:CE05625
WormBase description: F13H10.4 is orthologous to the
human gene A-GLUCOSIDASE I (GCS1; OMIM:601336), which
when mutated leads to disease.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
F14D2.4 Aff_F14D2.4 P W All gene names: bath-29; F14D2.4; 2D647; CE16979;
CE31788; WBGene00017452; WP:CE16979; WP:CE31788
Member of lists (Publications lists):
Reinke et al 2004, Fig2b shared
gemlines, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, GO categories,
Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F17H10.1 Aff_F17H10.1 P W All gene names: F17H10.1; CE03226; WBGene00008925;
WP:CE03226; XN725
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F20B6.2 Aff_F20B6.2 P W All gene names: vha-12; F20B6.2; F20B6.2.1; F20B6.2.2;
CE04424; NM_076310; WBGene00006921; WP:CE04424; XE811
WormBase description: vacuolar ATP synthase (strong)
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Early genes, Wang et al 2003 S3 genes
pass one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F20H11.3 Aff_F20H11.3 P W All gene names: mdh-1; F20H11.3; F20H11.3.1;
F20H11.3.2; F20H11.3.3; 3H696; CE09512; NM_066056;
WBGene00003162; WP:CE09512
WormBase description: mdh-1 encodes a homolog of malate
dehydrogenase that is predicted to be mitochondrial.
WormBase CDS description: malate dehydrogenase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F21G4.2 Aff_F21G4.2 P W All gene names: mrp-4; F21G4.2; CE09548; NM_077257;
WBGene00003410; WP:CE09548; XK507
WormBase description: The mrp-4 gene encodes a homolog
of human CFTR, which when mutated leads to cystic
fibrosis (OMIM:219700).
WormBase CDS description: multidrug
resistance-associated protein
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
Reinke et al 2004, list of genes in cluster F, Reinke
et al 2004, fem1 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004,
oogenesis enriched genes, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, GO categories,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F22D6.3 Aff_F22D6.3 P W All gene names: nrs-1; F22D6.3; F22D6.3a.1; F22D6.3a.2;
1H664; CE05684; WBGene00003815; WP:CE05684
WormBase description: nrs-1 encodes an asparaginyl-tRNA
synthetase that is required for embryonic viability and
fertility
WormBase CDS description: asparaginyl-tRNA synthetase
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
F22E5.9 Aff_F22E5.9 P W All gene names: F22E5.9; 2C927; CE09561;
WBGene00017708; WP:CE09561
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
F25B5.3 Aff_F25B5.3 P W All gene names: F25B5.3; F25B5.3c.1; F25B5.3c.2;
F25B5.3c.3; F25B5.3c.4; 3H41; CE26890; CE28001;
CE29776; CE30663; CE30664; WBGene00017775; WP:CE26890;
WP:CE28001; WP:CE29776; WP:CE30663; WP:CE30664
WormBase description: F25B5.3 is orthologous to the
human gene NUCLEOTIDASE, 5-PRIME, CYTOSOLIC III (NT5C3;
OMIM:606224), which when mutated leads to hemolytic
anemia due to UMPH1 deficiency
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
F25D1.1 Aff_F25D1.1 P W All gene names: tag-93; F25D1.1; 5L14; CE05722;
CE36134; WBGene00006460; WP:CE05722; WP:CE36134
WormBase description: protein phosphatase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F25D7.1 Aff_F25D7.1 P W All gene names: cup-2; tag-352; F25D7.1; 1K976;
CE09629; WBGene00000843; WBGene00009111; WP:CE09629
WormBase description: The primary phenotype of cup-2
animals is an accumulation of secreted GFP in the
pseudocoelom, suggesting a decrease in, or the absence
of, endocytosis in coelomocytes.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F25H2.13 Aff_F25H2.13 P W All gene names: F25H2.13; 1L153; CE15894;
WBGene00009124; WP:CE15894
WormBase description: DEAH-type helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, intrinsic, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F26B1.2 Aff_F26B1.2 P W All gene names: F26B1.2; F26B1.2c.1; F26B1.2c.2;
F26B1.2c.3; 1G895; CE09674; CE33057; CE33058; CE33059;
CE33060; WBGene00017816; WP:CE09674; WP:CE33057;
WP:CE33058; WP:CE33059; WP:CE33060
WormBase description: RNA-binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
F26F4.4 Aff_F26F4.4 P W All gene names: tag-340; F26F4.4; F26F4.4.1; F26F4.4.2;
F26F4.4.3; 3F991; CE30767; WBGene00017826; WP:CE30767
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F26H11.4 Aff_F26H11.4 P W All gene names: F26H11.4; 2O697; CE15911;
WBGene00009182; WP:CE15911
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, IVb male soma enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
F26H11.5 Aff_F26H11.5 P W All gene names: exl-1; F26H11.5; 2O698; CE24922;
NM_064599; WBGene00001371; WP:CE24922
Member of lists (Publications lists):
Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, fem3 enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
F27C8.6 Aff_F27C8.6 P W All gene names: F27C8.6; F27C8.6.1; F27C8.6.2; 4K352;
CE03271; WBGene00009186; WP:CE03271
WormBase description: esterase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S6 removed genes of
contamination
F28F8.6 Aff_F28F8.6 P W All gene names: atx-3; tag-70; F28F8.6; 5Q56; CE09760;
NM_074472; WBGene00006446; WP:CE09760
WormBase description: tag-70/F28F8.6 encodes an
ortholog of human ATAXIN-3 (OMIM:607047, mutated in
Machado-Joseph disease).
WormBase CDS description: Human Machedo-Joseph disease
protein 1 like
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 daf-16 Resveratrol
F29G9.2 Aff_F29G9.2 P W All gene names: F29G9.2; F29G9.2b.1; F29G9.2b.2;
F29G9.2b.3; CE09796; CE27374; NM_072159; NM_182341;
WBGene00017931; WP:CE09796; WP:CE27374
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E
F30F8.1 Aff_F30F8.1 P W All gene names: F30F8.1; 1I410; CE09813;
WBGene00009270; WP:CE09813
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
males vs glp4 male enriched , Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, list
of genes in cluster E
F30F8.9 Aff_F30F8.3 P W All gene names: F30F8.9; F30F8.9a.1; F30F8.9a.2;
F30F8.9b.1; F30F8.9b.2; 1I415; CE27148; CE32398;
WBGene00009276; WP:CE27148; WP:CE32398
F31B9.3 Aff_F31B9.3 P W All gene names: F31B9.3; CE17729; WBGene00009280;
WP:CE17729; XQ541
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F32B6.8 Aff_F32B6.8 P W All gene names: F32B6.8; F32B6.8a.1; F32B6.8a.2;
F32B6.8b.1; F32B6.8b.2; 4K665; CE09863; CE35519;
WBGene00009322; WP:CE09863; WP:CE35519
WormBase description: Yeast ORF YOR070C protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
F33A8.5 Aff_F33A8.5 P W All gene names: F33A8.5; F33A8.5.1; F33A8.5.2; 2L340;
CE17757; WBGene00009353; WP:CE17757
WormBase description: F33A8.5 is orthologous to the
human gene SUCCINATE DEHYDROGENASE COMPLEX, SUBUNIT D,
INTEGRAL MEMBRANE PROTEIN (SDHD; OMIM:602690), which
when mutated leads to disease.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang
et al 2003 S3 genes pass one-way ANOVA, Wang et al
2003 S4 genes pass two-wayANOVA P0
F33G12.2 Aff_F33G12.2 P W All gene names: F33G12.2; 2F320; CE27149;
WBGene00018014; WP:CE27149
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F33G12.3 Aff_F33G12.3 P W All gene names: F33G12.3; 2F322; CE04481;
WBGene00018015; WP:CE04481
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, GO categories
F35D11.4 Aff_F35D11.4 P W All gene names: F35D11.4; 2E893; CE32648;
WBGene00018045; WP:CE32648
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S8 SAGE genes in the dauer exit, Wang et al
2003 S4 Climbing, Wang et al 2003 S7 SAGE genes in
the dataset, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F35H10.7 Aff_F35H10.7 P W All gene names: F35H10.7; 4J63; CE04507;
WBGene00018072; WP:CE04507
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F37C12.2 Aff_F37C12.2 P W All gene names: F37C12.2; 3I275; CE00741;
WBGene00018150; WP:CE00741
Member of lists (Publications lists):
Link et al 2003 T2 Abeta induced,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F38H4.10 Aff_F38H4.10 P W All gene names: F38H4.10; 4M625; CE32887;
WBGene00009551; WP:CE32887
WormBase description: Yeast hypothetical protein YIK6
like
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, list of genes in cluster E, ViswanathanM et
al 2005 S2 sir-2.1 regulated
F38H4.8 Aff_F38H4.8 P W All gene names: ech-2; F38H4.8; 4M616; CE17808;
NM_069845; WBGene00001151; WP:CE17808
WormBase description: enoyl-CoA hydratase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 Climbing, Wang et al
2003 S4 genes pass two-wayANOVA P0
F39H2.3 Aff_F39H2.3 P W All gene names: F39H2.3; 1J241; CE37516;
WBGene00009563; WP:CE37516
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: S.pombe hypothetical protein
C21E11.07 like
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, ViswanathanM et al 2005
S2 sir-2.1 regulated
F40A3.3 Aff_F40A3.3 P W All gene names: F40A3.3; F40A3.3b.1; F40A3.3b.2; 5I359;
CE10146; CE38516; WBGene00018218; WP:CE10146;
WP:CE38516
WormBase description: phosphatidylethanolamine binding
protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, mixed oogenesis soma, Reinke et al 2004, list
of genes in cluster B, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al
2003 S4 genes pass two-wayANOVA P0
F40F9.7 Aff_F40F9.7 P W All gene names: F40F9.7; F40F9.7a.1; F40F9.7a.2;
F40F9.7b.1; F40F9.7b.2; F40F9.7b.3; F40F9.7b.4; 5K213;
CE05856; CE33580; WBGene00009584; WP:CE05856;
WP:CE33580
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
F40G9.11 Aff_F40G9.11 P W All gene names: mxl-2; F40G9.11; 3A804; CE19858;
NM_064772; WBGene00003510; WP:CE19858
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F41H10.10 Aff_F41H10.10 P W All gene names: htp-1; tag-35; F41H10.10; 4G156;
CE31692; NM_068398; WBGene00002032; WP:CE31692
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F41H10.11 Aff_F41H10.4 P W All gene names: sand-1; F41H10.11; 4G133; CE31693;
WBGene00018321; WP:CE31693
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
F41H10.3 Aff_F41H10.3 P W All gene names: F41H10.3; 4G139; CE10276; CE31694;
WBGene00018316; WP:CE10276; WP:CE31694
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F43C1.4 Aff_F43C1.4 P W All gene names: nhr-20; F43C1.4; 3F320; CE28025;
NM_065448; WBGene00003619; WP:CE28025
WormBase description: Zinc finger, C4 type (two
domains)
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma
F44F4.2 Aff_F44F4.2 P W All gene names: F44F4.2; F44F4.2.1; F44F4.2.2; 2L174;
CE00998; WBGene00009701; WP:CE00998
WormBase description: Protein-tyrosine phosphatase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, GO categories,
Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F45G2.3 Aff_F45G2.3 P W All gene names: F45G2.3; 3O513; CE28728;
WBGene00009731; WP:CE28728
WormBase description: XPG N-terminal domain, XPG
I-region
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, list
of genes in cluster E
F46B6.6 Aff_F46B6.6 P W All gene names: F46B6.6; 5K264; CE26974;
WBGene00009771; WP:CE26974
WormBase description: initiation factor IF-2
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
F46C5.8 Aff_F46C5.8 P W All gene names: F46C5.8; 2J103; CE03349;
WBGene00009783; WP:CE03349
WormBase description: endoplasmic reticular protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F46C5.9 Aff_F46C5.9 P W All gene names: F46C5.9; 2J100; CE10584;
WBGene00009784; WP:CE10584
WormBase description: G-protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F48E8.6 Aff_F48E8.6 P W All gene names: F48E8.6; 3G535; CE02758;
WBGene00018612; WP:CE02758
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
F52E1.1 Aff_F52E1.1 P W All gene names: pos-1; F52E1.1; 5I895; CE04629;
NM_072771; WBGene00004078; WP:CE04629
WormBase description: pos-1 encodes a CCCH-type
zinc-finger protein; during embryogenesis, maternally
provided POS-1 is essential for proper fate
specification of germ cells, intestine, pharynx, and
hypodermis; POS-1's role in cell fate specification is
likely as a translational regulator, as POS-1 is
required, in posterior blastomeres, for positive
regulation of apx-1 mRNA translation and negative
regulation of glp-1 mRNA translation via direct binding
to the spatial control region (SCR) in the glp-1 mRNA
3' UTR; in regulating mRNA translation, POS-1 interacts
with SPN-4, an RNP-type RNA binding protein, that may
function to negatively regulate POS-1 activity; pos-1
mRNA is first detected in the gonads of L4 and adult
animals, and is present uniformly in oocytes and newly
fertilized embryos; during early embryonic divisions,
pos-1 mRNA is present at higher levels in germline
blastomeres until it disappears following the division
of P4; POS-1 protein is first apparent at low levels in
1-cell embryos, with subsequent expression mirroring
that of pos-1 mRNA: high levels in germline blastomeres
until its disappearance after the P4 division; in the
germline blastomeres P1, P2, P3, and P4, POS-1
colocalizes with cytoplasmic and perinuclear P
granules.
WormBase CDS description: zinc-finger protein
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, Reinke et al 2004,
list of genes in cluster E, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S6 removed genes of
contamination
F54E7.3 Aff_F54E7.3 P W All gene names: par-3; F54E7.3; 3G765; CE28449;
CE28450; CE39941; NM_065816; WBGene00003918;
WP:CE28449; WP:CE28450; WP:CE39941
WormBase description: par-3 encodes a PDZ
domain-containing protein orthologous to mammalian
atypical PKC isotype-specific interacting protein
(ASIP) and Drosophila Bazooka; PAR-3 is required
maternally for polarization of the zygote along the
anterior-posterior (A-P) axis; PAR-3, PAR-6, and PKC-3
form a complex that localizes to the anterior
cytoplasmic cortex of the one- and two-cell embryo;
this localization is regulated spatially by PAR-2,
which segregates to the posterior cortex.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen
F56C11.5 Aff_F56C11.5 P W All gene names: F56C11.5; 1A651; CE34322;
WBGene00018957; WP:CE34322
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F56C9.3 Aff_F56C9.3 P W All gene names: F56C9.3; 3I401; CE29406; NM_066210;
WBGene00018948; WP:CE29406
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F56D1.7 Aff_F56D1.5 P W All gene names: daz-1; F56D1.7; 2F747; CE27175;
NM_062635; WBGene00000935; WP:CE27175
WormBase description: daz-1 encodes a protein
containing an RNA recognition motif that is required
for the progression of meiosis during oogenesis;
expressed in the germline and expression levels peak in
the proximal pachytene region.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F56H11.4 Aff_F56H11.4 P W All gene names: elo-1; pea-1; F56H11.4; 4K291; CE05979;
CEEL01; NM_069288; WBGene00001239; WP:CE05979; ceelo1
WormBase description: elo-1 encodes a component of C-18
polyunsaturated fatty acid (PUFA) elongase that is
required for normal elongation of n-6 and n-3 20-carbon
PUFA in vivo; ELO-1 is a condensing enzyme that
elongates n-6 and n-7 (and, with less efficiency, n-3)
series C18 PUFAs.
WormBase CDS description: Yeast YJT6 like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F57B9.6 Aff_F57B9.6 P W All gene names: inf-1; F57B9.6; F57B9.6a.1; F57B9.6a.2;
3I21; CE01341; CE38524; Ce1F; CeIF; NM_066108;
WBGene00002083; WP:CE01341; WP:CE38524
WormBase description: inf-1 encodes a protein with high
similarity to eukaryotic initiation factor 4A.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Romagnolo et al 2002 Fig3b Protein Synthesis,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Early genes, Wang et al 2003 S3 genes
pass one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F57B9.7 Aff_T07E3.7 P W All gene names: F57B9.7; 3I14; CE31011; CE31012;
WBGene00018998; WP:CE31011; WP:CE31012
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, mixed oogenesis soma, ViswanathanM et al 2005 S2
sir-2.1 regulated
F57C9.7 Aff_F57C9.7 P W All gene names: F57C9.7; 1F394; CE11334;
WBGene00019013; WP:CE11334
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F58B3.6 Aff_F58B3.6 P W All gene names: F58B3.6; F58B3.6.1; F58B3.6.2;
F58B3.6.3; 4M401; CE06008; WBGene00010232; WP:CE06008
WormBase description: interferon-related protein PC4
like
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F58G1.1 Aff_F58G1.1 P W All gene names: F58G1.1; 2N213; CE17921;
WBGene00010263; WP:CE17921
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, Fig2b shared gemlines, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt males vs
glp4 male enriched , ViswanathanM et al 2005 S2
sir-2.1 regulated
F58G1.2 Aff_F58G1.2 P W All gene names: F58G1.2; F58G1.2.1; F58G1.2.2; 2N206;
CE35561; WBGene00010264; WP:CE35561
WormBase description: Zinc finger, C2H2 type (6
domains)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
F59D12.5 Aff_F59D12.5 P W All gene names: F59D12.5; CE19909; WBGene00010332;
WP:CE19909; XQ262
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma
F59G1.1 Aff_F59G1.1 P W All gene names: F59G1.1; F59G1.1b.1; F59G1.1b.2;
F59G1.1b.3; F59G1.1c.1; F59G1.1c.2; F59G1.1d.1;
F59G1.1d.2; F59G1.1d.3; F59G1.1d.4; F59G1.1d.5; 2G205;
CE29810; CE29811; CE30378; CE33409; WBGene00019127;
WP:CE29810; WP:CE29811; WP:CE30378; WP:CE33409
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F59G1.7 Aff_F59G1.7 P W All gene names: frh-1; F59G1.7; F59G1.7.1; F59G1.7.2;
2G207; CE19476; NM_062782; WBGene00001486; WP:CE19476
WormBase description: frh-1 encodes the C. elegans
frataxin ortholog;, by homology, FRH-1 is predicted to
be a mitochondrial protein required for biogenesis of
iron-sulfur clusters, co-factors necessary for proper
function of electron transport chain proteins; in C.
elegans, loss of frh-1 activity via RNAi results in
small body size, pale coloration, reduced egg-laying
and fertility, altered responses to oxidative stress,
and a significant lifespan extension.
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, mixed oogenesis soma, ViswanathanM et al 2005 S2
sir-2.1 regulated
H19N07.1 Aff_H19N07.1 P W All gene names: phi-19; H19N07.1; H19N07.1.1;
H19N07.1.2; 5L592; CE32460; WBGene00010405; WP:CE32460
WormBase description: elongation factor
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, mixed oogenesis soma, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
H19N07.3 Aff_H19N07.3 P W All gene names: H19N07.3; H19N07.3.1; H19N07.3.2;
5L598; CE16184; WBGene00010407; WP:CE16184
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S6 removed genes of
contamination
H19N07.4 Aff_H19N07.4 P W All gene names: H19N07.4; H19N07.4.1; H19N07.4.2;
5L600; CE16185; WBGene00010408; WP:CE16185
WormBase description: H19N07.4 encodes an integral
membrane protein with acyl-CoA:diacylglycerol
o-acyltransferase activity when expressed in yeast;
H19N07.4 belongs to the MBOAT protein family, whose
biochemically characterized members transfer fatty
acids or acetate to membrane-associated
hydroxyl-bearing substrates such as cholesterol,
diacylglycerol, long-chain alcohols, or alginate; MBOAT
proteins include MOM-1 and its Drosophila homolog
PORCUPINE, involved in Wnt signalling; H19N07.4 has no
obvious function in mass RNAi assays.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, mixed oogenesis soma, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0,
Wang et al 2003 S4 Dauer Enriched
H20J04.5 Aff_H20J04_717.C P W All gene names: tag-355; H20J04.5; H20J04.5.1;
H20J04.5.2; H20J04.5.3; 2E617; CE23815; WBGene00019220;
WP:CE23815
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated
H21P03.1 Aff_H21P03.1 P W All gene names: mbf-1; H21P03.1; 4M244; CE18819;
NM_069765; WBGene00003148; WP:CE18819
WormBase description: Helix-turn-helix
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
H21P03.2 Aff_H21P03.2 P W All gene names: H21P03.2; 4M247; CE18820;
WBGene00010409; WP:CE18820
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
H25P06.1 Aff_H25P06.1 P W All gene names: H25P06.1; H25P06.1.1; H25P06.1.2;
1L904; CE18823; WBGene00010416; WP:CE18823
WormBase description: Hexokinases
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
K01G5.1 Aff_K01G5.1 P W All gene names: tag-331; K01G5.1; 3K846; 3L846;
CE26718; WBGene00010476; WP:CE26718
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, list
of genes in cluster E
K02B2.1 Aff_K02B2.1 P W All gene names: K02B2.1; 4G707; CE30082;
WBGene00019295; WP:CE30082
WormBase description: 6-phosphofructo-2-kinase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 daf-16 Resveratrol
K02B2.4 Aff_K02B2.4 P W All gene names: inx-7; opu-7; K02B2.4; 4G708; CE04690;
NM_068493; WBGene00002129; WP:CE04690
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
K02B9.1 Aff_K02B9.1 P W All gene names: K02B9.1; CE16206; WBGene00010492;
WP:CE16206; XO546
WormBase description: isocitrate lyase like
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, list
of genes in cluster E, ViswanathanM et al 2005 S2
sir-2.1 regulated
K02F2.4 Aff_K02F2.4 P W All gene names: ulp-5; K02F2.4; 1H387; CE17156;
NM_059551; WBGene00006740; WP:CE17156
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
K04D7.2 Aff_K04D7.2 P W All gene names: K04D7.2; 4K943; CE28240; CE28241;
WBGene00010557; WP:CE28240; WP:CE28241
WormBase description: TAT binding homolog 4 like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated, Wang et al 2003 S5 genes common
to feeding ANOVA, Wang et al 2003 S3 genes pass
one-way ANOVA
K07A1.1 Aff_K07A1.1 P W All gene names: K07A1.1; 1K158; CE18854;
WBGene00010608; WP:CE18854
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
K07A1.8 Aff_K07A1.8 P W All gene names: ile-1; K07A1.8; K07A1.8.1; K07A1.8.2;
1K186; CE11854; NM_060147; WBGene00002070; WP:CE11854
WormBase description: ile-1 is orthologous to the human
gene human ERGIC-53, which when mutated leads to
deficiency of coagulation factors V/VIII (OMIM:227300).
WormBase CDS description: P58 protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
K07B1.3 Aff_K07B1.3 P W All gene names: ucp-4; K07B1.3; 5J815; CE28591;
NM_073013; WBGene00006729; WP:CE28591
WormBase description: proton-channel protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
K07B1.4 Aff_K07B1.4 P W All gene names: K07B1.4; K07B1.4b.1; K07B1.4b.2; 5J811;
CE11882; CE27391; WBGene00019464; WP:CE11882;
WP:CE27391
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, McElwee et al 2003 T1 targets of daf-16,
Murphy et al 2003 Fig2 Class1 elongate lifespan,
Reinke et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 sir-2.1 regulated
K07C5.1 Aff_K07C5.1 P W All gene names: arx-2; K07C5.1; 5K816; CE06111;
NM_073256; WBGene00000200; WP:CE06111
WormBase description: actin
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, ViswanathanM et al
2005 S2 sir-2.1 regulated
K07H8.2 Aff_K07H8.2 P W All gene names: K07H8.2; K07H8.2b.1; K07H8.2b.2;
K07H8.2c.1; K07H8.2c.2; K07H8.2c.3; 4J57; CE18022;
CE28593; CE37721; WBGene00019504; WP:CE18022;
WP:CE28593; WP:CE37721
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
oogenesis enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated
K08F4.2 Aff_K08F4.2 P W All gene names: K08F4.2; 4K892; CE37535;
WBGene00010677; WP:CE37535
WormBase description: RNA recognition motif. (aka RRM,
RBD, or RNP domain)
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
K08H2.6 Aff_K08H2.6 P W All gene names: hpl-1; K08H2.6; CE06164; NM_077798;
WBGene00001995; WP:CE06164; XN865
WormBase description: The hpl-1 gene encodes a homolog
of heterochromatin protein 1 (HP1) that acts to support
the activity of HPL-2 in promoting germline function,
but that by itself is dispensable for any obvious
function in vivo.
WormBase CDS description: murine modifier 2 protein
like
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
K09A9.2 Aff_K09A9.2 P W All gene names: rab-14; K09A9.2; K09A9.2.1; K09A9.2.2;
CE11974; NM_078171; WBGene00004276; WP:CE11974; XQ224
WormBase description: rab-14 encodes a member of the
Rab GTPase family.
WormBase CDS description: RAS-related protein
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster A,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, mixed oogenesis soma, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated
K10B3.8 Aff_K10B3.8 P W All gene names: gpd-2; K10B3.8; CE07371; NM_076134;
WBGene00001684; WP:CE07371; XD732
WormBase description: gpd-2 encodes one of four C.
elegans glyceraldehyde-3-phosphate dehydrogenases
(GAPDHs); by homology, GPD-2 is predicted to reversibly
catalyze the oxidation and phosphorylation of
glyceraldehyde-3-phosphate to 1,3-diphosphoglycerate
during glycolysis; in C. elegans, GPD-2 and GPD-3
constitute the major GAPDH isoenzymes and are expressed
at highest levels during postembryonic development,
primarily in the actin-containing A and I zones of
body-wall muscle; loss of gpd-2 function via
RNA-mediated interference (RNAi) does not result in any
abnormalities.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Murphy et al 2003 Fig2 Class1
elongate lifespan, Roy et al 2002 S3 muscle genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
K10D2.6 Aff_K10D2.6 P W All gene names: emb-8; K10D2.6; K10D2.6.1; K10D2.6.2;
3G286; CE02018; WBGene00001262; WBGene00019632;
WP:CE02018
WormBase description: Uncloned locus required for
embryonic viability, for the normal generation of
anterior-posterior asymmetry in the early embryo, and
for normal P Granule and GLP-1 asymmetry in early
embryos.
WormBase CDS description: NADPH-cytochrome P450
Member of lists (Publications lists):
Custodia et al 2001 T2 Cytochrome
P450, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph
K11D12.5 Aff_K11D12.5 P W All gene names: K11D12.5; 5F508; CE12134;
WBGene00019645; WP:CE12134
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 daf-16
Resveratrol
K11G12.5 Aff_K11G12.5 P W All gene names: K11G12.5; CE02827; WBGene00019656;
WP:CE02827; XH342
WormBase description: mitochondrial 2-oxoglutartae
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
M01B12.3 Aff_M01B12.3 P W All gene names: arx-7; M01B12.3; 1D638; CE18061;
NM_058698; WBGene00000205; WP:CE18061
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
M01B12.4 Aff_M01B12.4 P W All gene names: M01B12.4; M01B12.4a.1; M01B12.4a.2;
CE29982; CE30554; CE37031; NM_170839; NM_170840;
NM_171834; WBGene00019697; WP:CE29982; WP:CE30554;
WP:CE37031
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
M01E11.6 Aff_M01E11.6 P W All gene names: klp-15; M01E11.6; 1G146; CE12298;
NM_059232; WBGene00002225; WP:CE12298
WormBase description: kinesins
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, Fig2b shared gemlines, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004,
oogenesis enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, GO categories
M01F1.8 Aff_M01F1.8 P W All gene names: M01F1.8; 3E590; CE33806; CE34206;
WBGene00010814; WP:CE33806; WP:CE34206
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, Fig2b shared gemlines,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt males vs
glp4 male enriched , Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
M01H9.3 Aff_M01H9.3 P W All gene names: M01H9.3; M01H9.3a.1; M01H9.3a.2; 4F234;
CE28614; CE28615; CE37722; WBGene00019719; WP:CE28614;
WP:CE28615; WP:CE37722
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1
elongate lifespan, Shen et al 2005 T1 hif-1 depend
hypoxia, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes
pass two-wayANOVA P0
M106.2 Aff_M106.2 P W All gene names: M106.2; 2L132; CE30680; WBGene00010910;
WP:CE30680
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster E, Reinke et al 2004, IVb male soma enriched
genes, ViswanathanM et al 2005 S2 sir-2.1 regulated
R03D7.1 Aff_R03D7.1 P W All gene names: R03D7.1; 2L219; CE01609;
WBGene00010988; WP:CE01609
WormBase description: R03D7.1 is orthologous to the
human gene METHIONINE SYNTHASE (MTR; OMIM:156570),
which when mutated leads to disease.
WormBase CDS description:
5-methyltetrahydrofolate-homocysteine methyltransferase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
R05D11.3 Aff_R05D11.3 P W All gene names: CE-NTF2; ran-4; R05D11.3; R05D11.3.1;
R05D11.3.2; 1J167; CE06238; NM_059921; WBGene00004305;
WP:CE06238
WormBase description: ran-4 encodes a ortholog of
NUCLEAR TRANSPORT FACTOR 2 (NTF2) from S. cerevisiae
and metazoa, which is predicted to interact with
nucleoporins and to promote transport of RAN-1(+GDP)
into the nucleus; RAN-4/NTF2 proteins are paralogous to
the N-terminal domain of RasGAP SH3 binding proteins
such as Drosophila RASPUTIN, and to
delta-5-3-ketosteroid isomerases, while having no
homology to Ran proteins per se; RAN-4 is essential for
early embryogenesis; in mass RNAi assays, ran-4 is
needed for embryonic viability, normally rapid growth,
fertility, and normal pronuclear envelopes in the
embryo.
WormBase CDS description: nuclear transport factor 2
like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, ViswanathanM et al
2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes
common to feeding ANOVA, Wang et al 2003 S3 genes
pass one-way ANOVA
R05D11.6 Aff_R05D11.6 P W All gene names: R05D11.6; 1J173; CE32473;
WBGene00011034; WP:CE32473
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen
R05F9.10 Aff_R05F9.10 P W All gene names: sgt-1; R05F9.10; 2F192; CE04813;
WBGene00019893; WP:CE04813
WormBase description: TPR domain repeats
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Murphy et al 2003 Fig2 Class2 shorten
lifespan, ViswanathanM et al 2005 S2 sir-2.1 regulated
R06C7.5 Aff_R06C7.5 P W All gene names: R06C7.5; R06C7.5b.1; R06C7.5b.2; 1H824;
CE06248; CE32476; WBGene00011064; WP:CE06248;
WP:CE32476
WormBase description: The R06C7.5 gene encodes an
ortholog of the human gene ADSL, which when mutated
leads to adenylosuccinate lyase deficiency
(OMIM:103050).
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated
R06F6.4 Aff_R06F6.4 P W All gene names: R06F6.4; 2L84; CE16303; WBGene00011068;
WP:CE16303
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, oogenesis enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005
S2 sir-2.1 regulated
R07B7.2 Aff_R07B7.2 P W All gene names: R07B7.2; 5M540; CE38533;
WBGene00011087; WP:CE38533
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, Fig2b shared gemlines, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, list of
genes in cluster order, Reinke et al 2004, wt males vs
glp4 male enriched , Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol
R07E4.4 Aff_R07E4.4 P W All gene names: mig-23; R07E4.4; R07E4.4.1; R07E4.4.2;
CE28748; NM_076593; WBGene00003254; WP:CE28748; XG566
WormBase description: guanosine-diphosphatase
