Gene name Source Gene ID Annotation Date Added by
AC3.3 Aff_AC3.3 P W All gene names: abu-1; pqn-1; AC3.3; 5K858; CE05133;
NM_073266; WBGene00000024; WP:CE05133
WormBase description: abu-1 encodes a transmembrane
protein with a predicted signal sequence, a
glutamine/asparagine-rich domain and multiple
cysteine-rich repeats (DUF139); abu-1 expression is
induced by blockage of the unfolded-protein response in
the endoplasmic reticulum, and ABU-1 may help protect
the organism from damage by improperly folded nascent
protein.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 Fig6A Resveratrol,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
AFF_C10B5.2 Aff_C10B5.2 P W
AFF_C25A1.6 Aff_C25A1.6 P W
AFF_C46A5.6 Aff_C46A5.6 P W
AFF_F07H5.5 Aff_F07H5.5 P W
AFF_F17C11.1 Aff_F17C11.1 P W
AFF_F22E5.15 Aff_F22E5.15 P W
AFF_F23A7.6 Aff_F23A7.6 P W
AFF_F36H5.7 Aff_F36H5.7 P W
AFF_F40F12.2 Aff_F40F12.2 P W
AFF_F45E6.5 Aff_F45E6.5 P W
AFF_F52G2.2 Aff_F52G2.2 P W
AFF_H20H17.1 Aff_H20H17.1 P W
AFF_K02B12.5 Aff_K02B12.5 P W
AFF_K08B12.3 Aff_K08B12.3 P W
AFF_K11D12.7 Aff_K11D12.7 P W
AFF_M03A1.3 Aff_M03A1.3 P W
AFF_R06A4.3 Aff_R06A4.3 P W
AFF_R07G3.4 Aff_R07G3.4 P W
AFF_T05H4.8 Aff_T05H4.8 P W
AFF_T05H4.9 Aff_T05H4.9 P W
AFF_T08B6.1 Aff_T08B6.1 P W
AFF_T21C12.4 Aff_T21C12.4 P W
AFF_Y13C8_223.B Aff_Y13C8_223.B P W
AFF_Y13C8_223.D Aff_Y13C8_223.D P W
AFF_Y17G9B.D Aff_Y17G9B.D P W
AFF_Y32F6A.1 Aff_Y32F6A.1 P W
AFF_Y38A10A.C Aff_Y38A10A.C P W
AFF_Y39B6.R Aff_Y39B6.R P W
AFF_Y39G10A_246.I Aff_Y39G10A_246.I P W
AFF_Y40B10A_112.B Aff_Y40B10A_112.B P W
AFF_Y40H7.D Aff_Y40H7.D P W
AFF_Y41E3.5 Aff_Y41E3.5 P W
AFF_Y47D3A.O Aff_Y47D3A.O P W
AFF_Y4C6A.D Aff_Y4C6A.D P W
AFF_Y53G8B_93.E Aff_Y53G8B_93.E P W
AFF_Y54C5B.1 Aff_Y54C5B.1 P W
AFF_Y63D3A.1 Aff_Y63D3A.1 P W
AFF_ZK105_3.G Aff_ZK105_3.G P W
B0001.6 Aff_B0001.6 P W All gene names: B0001.6; B0001.6.1; B0001.6.2;
B0001.6.3; 4M927; CE31863; WBGene00007091; WP:CE31863
B0025.1 Aff_B0025.1 P W All gene names: let-512; vps-34; B0025.1; B0025.1b.1;
B0025.1b.2; B0025.1c.1; B0025.1c.2; B0025.1d.1;
B0025.1d.2; 1G609; CE24759; CE24760; CE37691; CE37738;
CE37739; NM_059340; WBGene00006932; WP:CE24759;
WP:CE24760; WP:CE37691; WP:CE37738; WP:CE37739
WormBase description: The vps-34 gene encodes an
ortholog of the phosphoinositide 3-kinase VPS34 in S.
cerevisiae, a protein that regulates multiple steps in
endocytosis, and that is required for growth at normal
rates during development.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0035.14 Aff_B0035.14 P W All gene names: dnj-1; B0035.14; 4M69; CE05169;
NM_069721; WBGene00001019; WP:CE05169
WormBase description: This gene encodes a protein
containing a DnaJ ('J') domain.
WormBase CDS description: DNAJ protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0035.7 Aff_F54E12.5 P W All gene names: his-47; B0035.7; 4M88; NM_069730;
WBGene00001921; his 12
WormBase description: his-47 encodes an H2A histone; by
homology, HIS-47 is predicted to function as a
nucleosome component required for packaging of DNA into
chromatin; his-47 is a replication-dependent histone
locus that resides in a histone gene-rich region on
chromosome IV.
WormBase CDS description: histone H2A
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
B0035.9 Aff_F54E12.3 P W All gene names: his-46; B0035.9; 4M90; NM_069732;
WBGene00001920
WormBase description: his-46 encodes an H4 histone.
WormBase CDS description: histone H4
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0041.2 Aff_B0041.2 P W All gene names: B0041.2; B0041.2a.1; B0041.2a.2; 1F227;
CE27563; CE29526; CE33546; WBGene00015007; WP:CE27563;
WP:CE29526; WP:CE33546
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0041.4 Aff_B0041.4 P W All gene names: rpl-4; B0041.4; B0041.4.1; B0041.4.2;
B0041.4.3; 1F214; CE07669; NM_059015; WBGene00004415;
WP:CE07669
WormBase description: rpl-4 encodes a large ribosomal
subunit L4 protein.
WormBase CDS description: ribosomal protein L1
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0041.7 Aff_B0041.7 P W All gene names: slr-8; xnp-1; B0041.7; 1F234; CE17314;
NM_059022; WBGene00006961; WP:CE17314
WormBase description: xnp-1 encodes an ATP-dependent
DNA helicase of the SNF2 family that is orthologous to
human XNP/ATR-X, which is associated with a number of
X-linked mental retardation syndromes; in C. elegans,
xnp-1 activity is required at high temperatures for
embryogenesis, somatic gonad development, fertility,
and vulval morphogenesis; in addition, animals doubly
mutant for xnp-1 and lin-35/Rb, hpl-2/HP1, or
nucleosome remodelling and histone deacetylase (NuRD)
complex members such as lin-53 and let-418, display
larval arrest with growth cessation but continued cell
proliferation; xnp-1 is also required, with lin-35/Rb
and hpl-2/HP1, for proper regulation of transgene
expression; xnp-1 mRNA, detectable in embryos and the
germline by in situ hybridization, is expressed at
highest levels in embryos with decreasing levels seen
in successive larval stages; xnp-1 transcriptional
reporter fusions exhibit strong expression beginning at
mid-embryogenesis but fading by embryonic
morphogenesis; at hatching, expression is observed in
all dividing cells including the P lineage, and at
later larval stages expression is observed in the
vulval precursor cells.
WormBase CDS description: helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
B0207.12 Aff_B0207.12 P W All gene names: avr-14; gbr-2; B0207.12; 1G544;
CE26421; CE30227; CE32092; WBGene00000232; WP:CE26421;
WP:CE30227; WP:CE32092
WormBase description: avr-14 encodes an alpha-type
subunit of a glutamate-gated chloride channel
homologous to human GLRA2, which when mutated leads to
hyperekplexia (OMIM:149400); AVR-14 affects sensitivity
to the antiparisitic drug, ivermectin, in parallel with
avr-15 and glc-1 and in a genetic pathway with unc-9;
it functions in the extrapharyngeal nervous system, and
is expressed in a subset of neurons in the ring
ganglia, ventral cord, and some mechanosensory neurons.
B0238.1 Aff_B0238.1 P W All gene names: B0238.1; 5F718; CE07691;
WBGene00015067; WP:CE07691
WormBase description: carboxylesterase
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1
elongate lifespan, ReichertK et al 2005 T1
B0250.1 Aff_B0250.1 P W All gene names: rpl-2; B0250.1; B0250.1.1; B0250.1.2;
5U949; CE18478; NM_075539; WBGene00004413; WP:CE18478
WormBase description: rpl-2 encodes a large ribosomal
subunit L8 protein.
WormBase CDS description: Ribosomal Proteins L2
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0252.2 Aff_B0252.2 P W All gene names: asm-1; B0252.2; 2H201; CE30230;
NM_063014; WBGene00000211; WP:CE30230
WormBase description: Spingomyelin phosphodiesterase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
B0280.3 Aff_B0280.3 P W All gene names: B0280.3; B0280.3.1; B0280.3.2; 3I213;
CE00733; WBGene00015101; WP:CE00733
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0284.3 Aff_B0284.3 P W All gene names: B0284.3; 3F468; CE28525;
WBGene00007133; WP:CE28525
B0285.7 Aff_B0285.7 P W All gene names: B0285.7; 3F453; CE00646;
WBGene00007139; WP:CE00646
WormBase description: Aminopeptidase
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated
genes, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
B0304.1 Aff_B0304.1 P W All gene names: hlh-1; B0304.1; 2E811; CE02423;
CE30067; CE31766; MyoD1; WBGene00001948; WP:CE02423;
WP:CE30067; WP:CE31766
WormBase description: hlh-1 encodes a basic
helix-loop-helix (bHLH) transcription factor that is
the sole C. elegans member of the myogenic regulatory
factor (MRF) subgroup of bHLH proteins; in C. elegans,
HLH-1 activity is required during embryonic development
for the proper differentiation and function of body
wall muscle cells, indicating that unlike its
vertebrate counterparts, hlh-1 is not absolutely
required for body wall muscle specification; however,
ectopic expression of hlh-1 in the embryo is sufficient
to convert nearly all embryonic cell types to a
muscle-like fate; in regulating body wall muscle cell
development in some cell lineages, hlh-1 likely lies
downstream of the PAL-1 homeodomain protein that is
required for specification of the C and D founder cell
fates; HLH-1 is expressed in nuclei and first appears
in body wall muscle precursors beginning at the
~80-cell stage of embryogenesis; expression then
continues in these cells and their differentiated
descendants throughout embryonic, larval, and adult
stages of development.
WormBase CDS description: helix-loop-helix
transcription factor
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Roy
et al 2002 S2 positivecontrol L1 muscle, ViswanathanM
et al 2005 S2 sir-2.1 regulated
B0310.4 Aff_B0310.4 P W All gene names: B0310.4; CE03877; WBGene00015140;
WP:CE03877; XB132
WormBase description: repetitive proline-rich cell wall
protein
B0336.10 Aff_B0336.10 P W All gene names: rpl-23; B0336.10; B0336.10.1;
B0336.10.2; 3G794; CE00778; NM_065830; WBGene00004435;
WP:CE00778
WormBase description: rpl-23 encodes a large ribosomal
subunit L23 protein.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0511.1 Aff_B0511.1 P W All gene names: fkb-7; B0511.1; 1L245; CE26851;
NM_060391; WBGene00001432; WP:CE26851
WormBase description: fkb-7 encodes a peptidylprolyl
cis/trans isomerase homologous to mammalian
FK506-binding proteins; by homology, FKB-7 could
function in a number of different processes including
protein folding, signal transduction, and regulation of
muscle contraction; however, as loss of fkb-7 function
via RNA-mediated interference (RNAi) does not result in
any obvious abnormalities, the precise role of FKB-7 in
C. elegans development and/or behavior is not yet
known.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0511.6 Aff_B0511.6 P W All gene names: B0511.6; B0511.6.1; B0511.6.2; 1L203;
CE26853; WBGene00015232; WP:CE26853
WormBase description: helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0563.8 Aff_B0563.8 P W All gene names: B0563.8; CE39467; WBGene00015265;
WP:CE39467; XJ788
C01G10.8 Aff_C01G10.8 P W All gene names: C01G10.8; C01G10.8.1; C01G10.8.2;
5P564; CE07817; WBGene00007235; WP:CE07817
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
C01G5.6 Aff_C01G5.6 P W All gene names: C01G5.6; 4H289; CE23513;
WBGene00015308; WP:CE23513
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, GO
categories, Reinke et al 2004, list of genes in cluster
E, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang
et al 2003 S3 genes pass one-way ANOVA, Wang et al
2003 S4 genes pass two-wayANOVA P0, Wang et al 2003
S4 Dauer Enriched
C01G6.3 Aff_C01G6.3 P W All gene names: C01G6.3; 2J561; CE37474;
WBGene00007225; WP:CE37474
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C01H6.7 Aff_C01H6.7 P W All gene names: tag-298; C01H6.7; 1H803; CE05190;
WBGene00007256; WP:CE05190
WormBase description: Bromodomain
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C02B8.2 Aff_C02B8.2 P W All gene names: C02B8.2; CE03891; WBGene00015321;
WP:CE03891; XI761
C02F5.1 Aff_C02F5.1 P W All gene names: knl-1; C02F5.1; 3J343; CE02450;
NM_066410; WBGene00002231; WP:CE02450
WormBase description: knl-1 encodes a novel acidic
protein with a coiled-coil region at its C-terminus;
KNL-1 is an essential kinetochore component that is
required for proper spindle elongation and chromosome
separation, and in the kinetochore assembly pathway,
plays a key role in linking the initiation of
kinetochore formation with the construction of a
functional microtubule-binding interface; in the
assembly pathway, KNL-1 functions downstream of the
DNA-proximal kinetochore components CeCENP-A/HCP-3 and
CeCENP-B/HCP-4 and upstream of the outer kinetochore
components HIM-10/Nuf2p, NDC-80/HEC1, CeBUB-1, HCP-1,
and CeCLASP2/CLS-2; in expression studies in the
one-cell embryo, KNL-1 localizes to kinetochores
throughout mitosis.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C02F5.6 Aff_C02F5.6 P W All gene names: C02F5.6; CE00042; CE30417; NM_171212;
NM_171213; WBGene00015349; WP:CE00042; WP:CE30417
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C03B1.12 Aff_C03B1.12 P W All gene names: lmp-1; C03B1.12; C03B1.12.1;
C03B1.12.2; CE03912; NM_076671; WBGene00003053;
WP:CE03912; XG996
WormBase description: lmp-1 encodes a protein with
similarity to vertebrate lysosome-associated membrane
proteins CD68, and appears to be the only protein in C.
elegans that has a GYXX (phi) vertebrate lysosomal
targeting sequence at its carboxy terminus; localized
to the periphery of a large population of membrane
bound organelles (granules) seen throughout the early
embryos and restricted to the cells of the intestine
during later stages.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C03D6.3 Aff_C03D6.3 P W All gene names: cel-1; C03D6.3; 1K243; CE05197;
CE32300; NM_060168; WBGene00000466; WP:CE05197;
WP:CE32300
WormBase description: cel-1 encodes a mRNA capping
enzyme, with a N-terminal region with RNA
triphosphatase activity and a C-terminal region
containing motifs found in yeast and vaccinia virus
capping enzyme guanylytransferases; cel-1 is required
for embryonic viability, body morphology, and vulval
development.
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, list of genes in cluster F, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, intrinsic, Reinke et al 2004, wt vs glp-4
enriched genes, Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S8 SAGE genes in the dauer
exit, Wang et al 2003 S7 SAGE genes in the dataset
C03H5.7 Aff_C03H5.7 P W All gene names: C03H5.7; 2A673; CE07900;
WBGene00015409; WP:CE07900
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C04A2.1 Aff_C04A2.1 P W All gene names: C04A2.1; 2H139; CE36523;
WBGene00015410; WP:CE36523
Member of lists (Publications lists):
Shen et al 2005 T1 hif-1 depend
hypoxia, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C04E7.2 Aff_C04E7.2 P W All gene names: C04E7.2; CE28816; WBGene00015429;
WP:CE28816; XA975
C04F12.9 Aff_C04F12.9 P W All gene names: C04F12.9; 1K286; CE19682;
WBGene00007303; WP:CE19682
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
Member of lists (Publications lists):
Golden et al 2004, N2 vs daf-2
different genes at , Lund et al 2002 Fig3D Oocyte-en,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, mixed oogenesis soma, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C04F6.3 Aff_C04F6.3 P W All gene names: cht-1; C04F6.3; C04F6.3.1; C04F6.3.2;
CE03923; CHT1; NM_076187; WBGene00000503; WP:CE03923;
XE16
WormBase description: cht-1 encodes a chitinase
orthologous to human chitinase-1 (OMIM:600031,
mutations are associated with chitotriosidase
deficiency); CHT-1 is predicted to function as an
extracellular O-glycosyl hydrolase that hydrolyzes the
glycosidic bond between two or more carbohydrates; in
C. elegans, CHT-1 may play a role in embryogenesis, and
may also be required for cuticle degradation during
molting and degradation of chitin-containing pathogens
as part of a host defense mechanism.
WormBase CDS description: glycosyl hydrolase (family
18)
Member of lists (Publications lists):
Bishop et al 2004 T1 Upregulated in
vhl-1 vs WT, Jones et al 2001 Non dauer genes P<0.05,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C05B5.4 Aff_C05B5.4 P W All gene names: C05B5.4; 3L81; CE00880; WBGene00007321;
WP:CE00880
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C05C10.2 Aff_C05C10.2 P W All gene names: C05C10.2; C05C10.2b.1; C05C10.2b.2;
2K219; CE01466; CE27795; WBGene00007329; WP:CE01466;
WP:CE27795
WormBase description: NAM7 protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C05C8.5 Aff_C05C8.5 P W All gene names: C05C8.5; 5H714; CE07923;
WBGene00015462; WP:CE07923
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, GO
categories, Reinke et al 2004, list of genes in cluster
E, ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C05E4.1 Aff_C05E4.1 P W All gene names: pes-21; C05E4.1; 5B243; CE07935;
NM_070917; WBGene00005643; WP:CE07935
WormBase description: srp-2 encodes an ovalbumin-like
serpin (ov-serpin) member of the serine protease
inhibitor superfamily that is orthologous to human
NEUROSERPIN (OMIM:602445, mutated in familial
encephalopathy with neuroserpin inclusion bodies);
SRP-2 is predicted to function as a suicide substrate
that inhibits the proteolytic activity of serine
proteases, and in vitro, recombinant SRP-2 is able to
inhibit granzyme B activity; however, as loss of srp-2
function via RNA-mediated interference (RNAi) does not
result in any obvious abnormalities, the precise role
of SRP-2 in C. elegans development and/or behavior is
not yet known; srp-2 expression is detected in
hypodermal cells, particularly in the lateral seam
cells.
WormBase CDS description: serine protease inhibitor
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Wang et al 2003 S6 removed genes of
contamination
C05G5.3 Aff_C05G5.3 P W All gene names: C05G5.3; CE30853; WBGene00007349;
WP:CE30853; XP370
C05G5.4 Aff_C05G5.4 P W All gene names: C05G5.4; CE05227; WBGene00007350;
WP:CE05227; XP373
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: succinyl-CoA synthetase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
C06A6.2 Aff_C06A6.1 P W All gene names: C06A6.2; 4I617; CE31152; CE31153;
WBGene00015507; WP:CE31152; WP:CE31153
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma
C06A8.3 Aff_C06A8.3 P W All gene names: C06A8.3; 2I81; CE02454; WBGene00015514;
WP:CE02454
WormBase description: 17k antigen (O. volvulus)
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Early genes, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0, Zhang et al 2002, T1
mec-3 dependent genes
C06A8.5 Aff_C06A8.5 P W All gene names: C06A8.5; 2I73; CE02456; WBGene00015515;
WP:CE02456
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, Fig2b shared gemlines, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , ViswanathanM et al 2005 S2
sir-2.1 regulated
C06E1.1 Aff_C06E1.1 P W All gene names: C06E1.1; 3J695; CE00054;
WBGene00015518; WP:CE00054
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C06E7.4 Aff_C06E7.4 P W All gene names: C06E7.4; 4G616; CE29026;
WBGene00015541; WP:CE29026
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C06G4.2 Aff_C06G4.2 P W All gene names: clp-1; C06G4.2; C06G4.2a.1; C06G4.2a.2;
C06G4.2b.1; C06G4.2b.2; C06G4.2b.3; 3J75; CE00517;
CE30486; CE37743; CE37744; NM_066339; NM_066340;
NM_171201; NM_171886; WBGene00000542; WP:CE00517;
WP:CE30486; WP:CE37743; WP:CE37744
WormBase description: clp-1 encodes a calpain homolog
that has significant identity to mammalian calpains
over its whole length and that contains motifs typical
of calpains, including a thiol (cysteine) protease
active site and a Ca[2+]-binding domain; CLP-1 is
required, in parallel with TRA-3 but in series with
ASP-3 and ASP-3, for degenerative (necrotic-like) cell
death in neurons induced by mutations such as mec-4(d),
deg-3(d), or gsa-1(gf).
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C07A12.7 Aff_C07A12.7 P W All gene names: C07A12.7; C07A12.7a.1; C07A12.7a.2;
C07A12.7c.1; C07A12.7c.2; CE25764; CE27055; CE33557;
WBGene00015561; WP:CE25764; WP:CE27055; WP:CE33557;
XF138
C07A9.2 Aff_C07A9.2 P W All gene names: C07A9.2; C07A9.2.1; C07A9.2.2; 3J784;
3K784; CE00499; WBGene00007400; WP:CE00499
WormBase description: G10 protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO
categories
C07A9.6 Aff_C07A9.6 P W All gene names: ugt-60; C07A9.6; C07A9.6.1; C07A9.6.2;
3K766; CE33970; WBGene00007402; WP:CE33970
WormBase description: UDP-glucuronosyltransferase
C07D10.5 Aff_C07D10.5 P W All gene names: C07D10.5; 2H673; CE36628;
WBGene00015569; WP:CE36628
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, herm soma enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C08A9.7 Aff_C08A9.7 P W All gene names: sdz-2; C08A9.7; CE06789;
WBGene00015587; WP:CE06789; XR714
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C08F1.3 Aff_C08F1.3 P W All gene names: fbxb-13; C08F1.3; 2C79; CE08018;
WBGene00015607; WP:CE08018
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; its encoded
protein also contains a Pfam-B45 motif of presently
unknown function.
C08F1.6 Aff_C08F1.6 P W All gene names: C08F1.6; 2C78; CE08021; WBGene00015610;
WP:CE08021
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C08F8.4 Aff_C08F8.4 P W All gene names: C08F8.4; 4L922; CE05251;
WBGene00007446; WP:CE05251
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, spermatogenesis
enriched genes, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, fem3 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt males vs glp4 male enriched , Reinke et
al 2004, list of genes in cluster D, Reinke et al 2004,
shared sperm
C08F8.5 Aff_C08F8.5 P W All gene names: fbxb-9; C08F8.5; 4L924; CE05252;
WBGene00007447; WP:CE05252
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; its encoded
protein also contains a Pfam-B45 motif of presently
unknown function.
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C09B8.5 Aff_C09B8.5 P W All gene names: C09B8.5; CE02465; WBGene00015624;
WP:CE02465; XG640
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Romagnolo
et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2
sir-2.1 regulated
C09D4.5 Aff_C09D4.5 P W All gene names: rpl-19; C09D4.5; C09D4.5.1; C09D4.5.2;
C09D4.5.3; 1G54; CE08034; NM_059207; WBGene00004431;
WP:CE08034
WormBase description: rpl-19 encodes a large ribosomal
subunit L19 protein.
WormBase CDS description: 60S ribosomal protein L19
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C09H6.3 Aff_C09H6.3 P W All gene names: mau-2; C09H6.3; 1I705; CE15611;
NM_059827; WBGene00003136; WBGene00007498; WP:CE15611
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C10F3.4 Aff_C10F3.4 P W All gene names: C10F3.4; 5G449; CE30723; CE37609;
WBGene00015678; WP:CE30723; WP:CE37609
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
daf-16 Resveratrol, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang
et al 2003 S4 genes pass two-wayANOVA P0
C10G11.7 Aff_C10G11.7 P W All gene names: C10G11.7; C10G11.7.1; C10G11.7.2;
C10G11.7.3; 1G865; CE08086; WBGene00015687; WP:CE08086
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order
C10G8.6 Aff_C10G8.6 P W All gene names: ceh-34; C10G8.6; 5F794; CE20496;
NM_072018; WBGene00000455; WP:CE20496
WormBase description: ceh-34 encodes a homeodomain
protein, homologous to human SIX2 (OMIM:604994), that
is expressed very weakly in the pharynxes of late
embryos and early larvae; it has no known function.
WormBase CDS description: homeobox protein
C10H11.3 Aff_C10H11.3 P W All gene names: ugt-25; C10H11.3; 1F303; CE08092;
WBGene00015692; WP:CE08092
WormBase description: 7TM chemoreceptor, ugt family
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, Reinke et al 2004, mixed sperm soma, Reinke
et al 2004, GO categories, Reinke et al 2004, fem3
enriched genes
C13C12.2 Aff_C13C12.2 P W All gene names: C13C12.2; 5N4; CE08133; WBGene00007552;
WP:CE08133
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C14A4.1 Aff_C14A4.1 P W All gene names: tag-242; C14A4.1; C14A4.1.1; C14A4.1.2;
CE02138; WBGene00007555; WP:CE02138
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
C15C8.1 Aff_C15C8.1 P W All gene names: C15C8.1; 5N215; CE05285;
WBGene00007604; WP:CE05285
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C15H9.7 Aff_C15H9.7 P W All gene names: C15H9.7; CE06835; WBGene00015802;
WP:CE06835; XG726
WormBase description: kynureninase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Murphy et al 2003 Fig2 Class2 shorten
lifespan, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C16C4.6 Aff_C16C4.6 P W All gene names: fbxb-98; C16C4.6; 2C131; CE08202;
WBGene00015830; WP:CE08202
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; its encoded
protein also contains a Pfam-B45 motif of presently
unknown function.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C17B7.3 Aff_C17B7.3 P W All gene names: C17B7.3; 5D823; CE16851;
WBGene00015877; WP:CE16851
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
C17G1.3 Aff_C17G1.3 P W All gene names: ugt-23; C17G1.3; CE08282;
WBGene00007650; WP:CE08282; XK542
WormBase description: UDP-glucosyltransferase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, Reinke et al 2004, GO categories, Reinke et
al 2004, herm soma enriched genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 Dauer
Enriched, Wang et al 2003 S4 genes pass two-wayANOVA
P0
C18A11.5 Aff_C18A11.5 P W All gene names: xol-1; C18A11.5; CE24807; CE35708;
CE35709; WBGene00006962; WP:CE24807; WP:CE35708;
WP:CE35709; XI661
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C18D1.1 Aff_C18D1.1 P W All gene names: die-1; C18D1.1; C18D1.1.1; C18D1.1.2;
2K352; CE01501; NM_063774; WBGene00000995; WP:CE01501
WormBase description: die-1 encodes a C2H2 zinc finger
protein containing four fingers, homologous to
CG18265-PA in Drosophila; DIE-1 is autonomously
required in the posterior dorsal hypodermis for
intercalation, for morphogenesis in other embryonic
tissues, and for normal postembryonic growth and vulval
development.
WormBase CDS description: Zinc finger, C2H2 type (3
domains)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C18D11.4 Aff_C18D11.4 P W All gene names: rsp-8; C18D11.4; C18D11.4.1;
C18D11.4.2; 3M919; CE18515; NM_067132; WBGene00004705;
WP:CE18515
WormBase description: RNA recognition motif. (aka RRM,
RBD, or RNP domain)
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C18G1.2 Aff_C18G1.2 P W All gene names: C18G1.2; 5F251; CE17418;
WBGene00015981; WP:CE17418
WormBase description: GATA transcription factor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
C23G10.8 Aff_C23G10.8 P W All gene names: C23G10.8; C23G10.9; 3H292; CE25784;
WBGene00016015; WP:CE25784
WormBase description: S. pombe adenylyl
cyclase-associated protein (weak)
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen
C24B5.4 Aff_C24B5.4 P W All gene names: C24B5.4; 5J674; CE37611;
WBGene00016046; WP:CE37611
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C24H11.2 Aff_C24H11.1 P W All gene names: C24H11.2; 3M880; CE18525;
WBGene00007700; WP:CE18525
WormBase description: Protein phosphatase-1 (PP1)
Member of lists (Publications lists):
Reinke et al 2004, male sperm, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, wt herm vs wt herm enriched gen, Reinke et al
2004, fem3 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, mixed sperm
soma, Reinke et al 2004, list of genes in cluster D,
Reinke et al 2004, GO categories
C24H12.4 Aff_C24H12.4 P W All gene names: C24H12.4; 2A705; CE27728; CE29675;
WBGene00016073; WP:CE27728; WP:CE29675
WormBase description: helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen
C25A1.4 Aff_C25A1.4 P W All gene names: C25A1.4; C25A1.4.1; C25A1.4.2; 1K746;
CE08369; WBGene00007706; WP:CE08369
WormBase description: RNA binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
C25D7.3 Aff_C25D7.3 P W All gene names: dpy-29; sdc-3; C25D7.3; 5P520; CE08389;
NM_074302; WBGene00004747; WP:CE08389
WormBase description: sdc-3 encodes a protein that
contains two mutationally separable domains: a zinc
finger motif required for dosage compensation and a
myosin- like putative ATP- binding region required for
her-1 regulation of sex determination; SDC-3 activates
dosage compensation by directing the dosage
compensation protein complex to the hermaphrodite X
chromosomes, and is functionally redundant with SDC-2
with respect to dosage compensation; SDC-1, SDC-2, and
SDC-3 proteins form a complex.
WormBase CDS description: Zinc finger, C2H2 type
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, mixed oogenesis soma
C25F6.3 Aff_C25F6.3 P W All gene names: C25F6.3; CE38489; WBGene00016103;
WP:CE38489; XG89
WormBase description: The C25F6.3 gene encodes an
ortholog of the human gene DIHYDROPYRIMIDINE
DEHYDROGENASE (DPYD), which when mutated leads to
thymine-uraciluria (OMIM:274270).
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Murphy et al 2003 Fig2 Class2
shorten lifespan, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C26B9.1 Aff_C26B9.1 P W All gene names: C26B9.1; CE30880; CE34262; NM_076507;
WBGene00016131; WP:CE30880; WP:CE34262
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C26E6.8 Aff_C26E6.8 P W All gene names: ula-1; C26E6.8; C26E6.8.1; C26E6.8.2;
3G8; CE29678; NM_065636; WBGene00006735; WP:CE29678
WormBase description: The ula-1 gene encodes a
component of the enzyme that activates NED-8, which in
turn is a ubiquitin-like protein whose conjugating
enzyme is UBC-12.
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C27A12.6 Aff_C27A12.6 P W All gene names: C27A12.6; 1G630; CE08415;
WBGene00016156; WP:CE08415
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C27C7.7 Aff_C27C7.7 P W All gene names: C27C7.7; 1M11; CE18537; WBGene00007769;
WP:CE18537
C28A5.4 Aff_C28A5.4 P W All gene names: ceh-43; C28A5.4; 3F536; CE05325;
NM_065503; WBGene00000463; WP:CE05325
WormBase description: A homeobox protein of the
Distal-less (Dll) class that is required for
development of the anterior hypdermis during embryonic
morphogenesis for cell adhesion; also affects embryonic
and larval viability; it is predominantly expressed in
the head hypdodermis, neuronal support cells and CAN
neurons.
WormBase CDS description: homeobox protein (distal-less
subfamily)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Portman et al 2004 T1 25
candidate ray genes, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma
C28C12.7 Aff_C28C12.7 P W All gene names: spp-10; C28C12.7; C28C12.7a.1;
C28C12.7a.2; 4J243; CE29486; CE31323; NM_171399;
NM_171400; WBGene00004995; WP:CE29486; WP:CE31323
WormBase description: spp-10 encodes two protein
isoforms that are orthologous to the human gene
PROSAPOSIN (PSAP; OMIM:176801, mutated in Gaucher
disease and metachromatic leukodystrophy); SPP-10A and
-10B are predicted to have 3 and 4 embedded saposin
sequences, that are likely to be split into individual
saposin peptides by proteolysis; in mammals, saposins
activate the enzymes sphingomyelinphosphodiesterase and
beta-glucosylceramidase; spp-10 has no obvious function
in mass RNAi assays.
WormBase CDS description: 7TM chemoreceptor, spp family
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes,
Reinke et al 2004, mixed sperm soma, Reinke et al 2004,
fem3 enriched genes, ViswanathanM et al 2005 S2
sir-2.1 regulated
C28G1.4 Aff_C28G1.4 P W All gene names: C28G1.4; CE04121; WBGene00016189;
WP:CE04121; XJ468
WormBase description: zinc finger
C28H8.1 Aff_C28H8.1 P W All gene names: C28H8.1; 3H17; CE01820; WBGene00016192;
WP:CE01820
WormBase description: C28H8.1 is orthologous to the
human gene BCL7A (OMIM:601406), which when mutated
leads to high-grade B-cell non-Hodgkin lymphoma.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, oogenesis enriched genes,
Reinke et al 2004, IVb male soma enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005
S2 sir-2.1 regulated
C29A12.3 Aff_C29A12.3 P W All gene names: lig-1; C29A12.3; 5L295; CE37480;
CE37481; NM_171537; NM_171538; WBGene00002985;
WP:CE37480; WP:CE37481
WormBase description: lig-1 is orthologous to the human
gene LIM HOMEOBOX PROTEIN 3 ISOFORM B (LIG1;
OMIM:600577), which when mutated leads to disease.
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
C29F3.1 Aff_C29F3.1 P W All gene names: ech-1; C29F3.1; 5P838; CE08435;
NM_074409; WBGene00001150; WP:CE08435
WormBase description: long-chain enoyl-CoA hydratase
C29F4.1 Aff_C29F4.1 P W All gene names: col-125; C29F4.1; C29F4.1.1; C29F4.1.2;
4L991; CE03038; NM_069706; WBGene00000699; WP:CE03038
WormBase description: collagen
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt herm
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C29F7.2 Aff_C29F7.2 P W All gene names: C29F7.2; CE35414; WBGene00007811;
WP:CE35414; XO35
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed sperm soma, Reinke et
al 2004, fem3 enriched genes
C29F7.6 Aff_C29F7.6 P W All gene names: C29F7.6; CE08447; WBGene00007813;
WP:CE08447; XO59
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b others,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C30G4.3 Aff_C30G4.3 P W All gene names: gcy-11; C30G4.3; CE39901; NM_078354;
WBGene00001537; WP:CE39901; XR660
WormBase description: guanylate cyclase receptor
Member of lists (Publications lists):
Baugh et al 2005, PAL-1 target genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C30G4.6 Aff_C30G4.6 P W All gene names: C30G4.6; CE39902; WBGene00016271;
WP:CE39902; XR688
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C31B8.8 Aff_C31B8.8 P W All gene names: C31B8.8; 5D384; CE26674;
WBGene00016283; WP:CE26674
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C31E10.7 Aff_C31E10.7 P W All gene names: C31E10.7; C31E10.7.1; C31E10.7.2;
CE37487; WBGene00007848; WP:CE37487; XO621
WormBase description: C31E10.7 is orthologous to the
human gene UNKNOWN (PROTEIN FOR MGC:10230) (CYB5;
OMIM:250790), which when mutated leads to disease.
WormBase CDS description: cytochrome b5
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C31G12.1 Aff_C31G12.1 P W All gene names: C31G12.1; 5S657; CE15660;
WBGene00007850; WP:CE15660
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C31H5.4 Aff_C31H5.4 P W All gene names: C31H5.4; C31H5.4.1; C31H5.4.2; 1J618;
CE17484; NM_060029; WBGene00007855; WP:CE17484
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
C32B5.14 Aff_C32B5.14 P W All gene names: C32B5.14; 2B254; CE08522;
WBGene00016307; WP:CE08522
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C32B5.16 Aff_C32B5.16 P W All gene names: sdz-4; C32B5.16; 2B251; CE08524;
WBGene00016309; WP:CE08524
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C32B5.5 Aff_C32B5.5 P W All gene names: C32B5.5; 2B261; CE34725;
WBGene00016298; WP:CE34725
C32E8.7 Aff_C32E8.7 P W All gene names: ric-19; C32E8.7; 1E346; CE39089;
NM_058815; WBGene00004368; WP:CE39089
WormBase description: The ric-19 gene encodes an
evolutionarily conserved cytosolic protein involved in
neuroendocrine secretion via association with secretory
vesicles.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C32F10.2 Aff_C32F10.2 P W All gene names: lin-35; C32F10.2; 1G391; CE24823;
NM_059285; WBGene00003020; WP:CE24823
WormBase description: lin-35 encodes the C. elegans
retinoblastoma protein (Rb) ortholog; lin-35 was first
identified in screens for synthetic multivulva (synMuv)
genes and as a class B synMuv gene, functions
redundantly with class A genes to antagonize Ras
signaling and negatively regulate vulval development;
in addition, lin-35 activity is required redundantly
with: 1) pha-1 and ubc-18 for early steps in pharyngeal
morphogenesis, 2) fzr-1 for normal patterns of
postembryonic proliferation, 3) xnp-1 for somatic gonad
development, and 4) psa-1 for fertility and embryonic
and larval development; on its own, lin-35 is also
required for wild-type levels of fertility; LIN-35 is
expressed broadly in embryos and L1 larvae, but in
later larvae and adults is detected in vulval precursor
cells and their descendants as well as a subset of head
and tail cells.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, oogenesis enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005
S2 sir-2.1 regulated
C33A12.2 Aff_C33A12.2 P W All gene names: nlp-35; C33A12.2; 4K284; CE05348;
WBGene00007881; WP:CE05348
C33C12.5 Aff_C33C12.5 P W All gene names: fbxb-38; C33C12.5; 2C458; CE08553;
WBGene00016337; WP:CE08553
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; its encoded
protein also contains a Pfam-B45 motif of presently
unknown function.
Member of lists (Publications lists):
Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, fem3 enriched genes
C33F10.4 Aff_C33F10.3 P W All gene names: C33F10.4; 2F87; CE02530; CE02531;
CE27103; WBGene00016353; WP:CE02530; WP:CE02531;
WP:CE27103
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
C33G3.3 Aff_C33G3.3 P W All gene names: C33G3.3; CE08559; WBGene00007903;
WP:CE08559; XO686
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C33G3.4 Aff_C33G3.4 P W All gene names: C33G3.4; CE08560; WBGene00007904;
WP:CE08560; XO693
WormBase description: C33G3.4 is orthologous to the
human gene BETA-MANNOSIDASE (MANBA; OMIM:248510), which
when mutated leads to disease.
WormBase CDS description: beta-mannosidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C34B2.3 Aff_C34B2.3 P W All gene names: C34B2.3; 1L251; CE34266;
WBGene00016388; WP:CE34266
WormBase description: protein kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, spermatogenesis
enriched genes, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, fem3 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt males vs glp4 male enriched , Reinke et
al 2004, list of genes in cluster D, Reinke et al 2004,
GO categories, Reinke et al 2004, shared sperm,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C34C6.6 Aff_C34C6.6 P W All gene names: PEX-5; prx-5; C34C6.6; 2I995; CE03054;
CE36377; WBGene00004194; WP:CE03054; WP:CE36377
WormBase description: prx-5 encodes an ortholog of the
human receptor for type I peroxisomal targeting signal
protein, PXR1 (or PEX5; OMIM:600414), which when
mutated leads to neonatal adrenoleukodystrophy or
Zellweger syndrome; PXR1 protein is a component of the
peroxisomal import machinery known to exist in
organisms like yeast, plants and mammals.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
C34D10.1 Aff_C34D10.1 P W All gene names: C34D10.1; CE02532; WBGene00016406;
WP:CE02532; XI649
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C34E10.7 Aff_C34E10.7 P W All gene names: cnd-1; hlh-5; C34E10.7; 3G328; CE01187;
NM_065714; WBGene00000561; WP:CE01187
WormBase description: cnd-1 is orthologous to the human
gene NEUROGENIC DIFFERENTIATION 1 (NEUROD1;
OMIM:601724), which when mutated leads to disease.
C34F11.4 Aff_C34F11.4 P W All gene names: msp-50; C34F11.4; 2F491; NM_062571;
WBGene00003443
WormBase description: msp-50 encodes a protein that
belongs to a family of proteins called the Major Sperm
Proteins (MSPs) that is conserved in nematodes; this
family consists of closely related, small, basic
proteins that make up 15% of sperm protein; this
multigene family consists of over fifty genes,
including many pseudogenes; MSPs are involved in both
extracellular signaling and cytoskeletal functions
during reproduction-MSP antagonizes Eph/ephrin
signaling, in part, by binding VAB-1 Eph receptor
tyrosine kinase on oocytes and sheath cells to promote
oocyte maturation and MAPK activation; MSPs assemble
into fibrous networks that drive movement of the C.
elegans sperm; msp genes are expressed only in late
primary spermatocytes.
WormBase CDS description: major sperm protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, spermatogenesis
enriched genes, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, fem3 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt males vs glp4 male enriched , Reinke et
al 2004, list of genes in cluster D, Reinke et al 2004,
shared sperm, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
C34F6.6 Aff_C34F6.6 P W All gene names: C34F6.6; CE15675; WBGene00007940;
WP:CE15675; XL826
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 Resveratrol
regulate WT
C35C5.1 Aff_C35C5.1 P W All gene names: sdc-2; C35C5.1; CE18542; NM_077523;
WBGene00004746; WP:CE18542; XM151
WormBase description: The sdc-2 gene encodes a protein
that represses transcription of X chromosomes to
achieve dosage compensation, and that also represses
the male sex-determination gene her-1 to elicit
hermaphrodite differentiation.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma
C35D10.13 Aff_C35D10.13 P W All gene names: C35D10.13; 3F966; CE01194;
WBGene00016449; WP:CE01194
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C36B1.5 Aff_C36B1.5 P W All gene names: C36B1.5; C36B1.5.1; C36B1.5.2; 1J310;
CE05372; WBGene00007972; WP:CE05372
WormBase description: U4/U6 small nuclear
ribonucleoprotein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
C37A2.8 Aff_C37A2.8 P W All gene names: C37A2.8; 1H376; CE08617; CE29218;
WBGene00016494; WP:CE08617; WP:CE29218
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C37C3.8 Aff_C37C3.8 P W All gene names: tag-253; C37C3.8; C37C3.8a.1;
C37C3.8a.2; C37C3.8a.3; C37C3.8a.4; 5I326; CE06933;
CE30736; WBGene00016500; WP:CE06933; WP:CE30736
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Dauer Enriched, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C37E2.1 Aff_C37E2.1 P W All gene names: C37E2.1; C37E2.1.1; C37E2.1.2;
C37E2.1.3; CE08620; WBGene00007993; WP:CE08620; XO790
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: isocitrate dehydrogenase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C38C10.4 Aff_C38C10.4 P W All gene names: ags-3.3; gpr-2; C38C10.4; 3K482;
CE00107; NM_066665; WBGene00001689; WP:CE00107
WormBase description: gpr-2 encodes a protein
containing a GPR (G Protein Regulator)/GoLoco motif
characteristic of guanine nucleotide exchange factors
specific for G-alpha GTPases; GPR-2 appears to function
redundantly during early embryogenesis and germ-line
development to regulate chromosome and spindle
movements during cell division; GPR-2 likely acts as a
positive regulator of G protein signaling and
specifically, may regulate GOA-1 signaling in the
embryo; GPR-2 forms a protein complex with the nearly
identical GPR-1 and with LIN-5, a coiled-coil protein
that is required for proper localization of GPR-2 to
the cell cortex and spindle asters of the early embryo;
in addition, proper GPR-2/GPR-1/LIN-5 localization
between the P2 and EMS blastomeres at the four-cell
stage, which may contribute to spindle positioning in
EMS, requires the MES-1/SRC-1 tyrosine kinase signaling
pathway; GPR-2 is believed to act downstream of, or in
parallel to, PAR-3, a PDZ domain-containing protein, in
mitotic spindle positioning in the early embryo.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, Fig2b shared gemlines, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C38C6.4 Aff_C38C6.4 P W All gene names: sre-13; C38C6.4; 2O918; CE38042;
NM_064641; WBGene00007997; WP:CE38042
WormBase description: 7TM receptor, sre family
C39D10.8 Aff_C39D10.4 P W All gene names: C39D10.8; CE29713; CE29714; CE30501;
WBGene00016535; WP:CE29713; WP:CE29714; WP:CE30501;
XI498
Member of lists (Publications lists):
Wang et al 2003 S4 Climbing, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
C39E9.11 Aff_C39E9.11 P W All gene names: C39E9.11; 4N856; CE20559;
WBGene00008034; WP:CE20559
WormBase description: C39E9.11 is orthologous to the
human gene PAPILLARY RENAL CELL CARCINOMA
(TRANSLOCATION-ASSOCIATED) (PRCC; OMIM:179755), which
when mutated leads to disease.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C40A11.4 Aff_C40A11.4 P W All gene names: C40A11.4; 2C429; CE36797;
WBGene00016547; WP:CE36797
C40A11.7 Aff_C40A11.7 P W All gene names: C40A11.7; 2C438; CE19370;
WBGene00016550; WP:CE19370
C43D7.2 Aff_C43D7.2 P W All gene names: fbxb-65; C43D7.2; 5T805; CE18547;
WBGene00008066; WP:CE18547
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma
C43D7.8 Aff_Y116F11.I P W All gene names: C43D7.8; 5T784; CE18552;
WBGene00008070; WP:CE18552
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C43E11.10 Aff_C43E11.10 P W All gene names: cdc-6; C43E11.10; 1E838; CE08688;
NM_058942; WBGene00000382; WP:CE08688
WormBase description: cdc-6 encodes a homolog of an
origin complex component (CDC6) which in yeast controls
the start of DNA replication, and also has a distant
paralog (Y39A1A.12) within the C. elegans genome; CDC-6
is superficially dispensable for embryonic viability,
perhaps because of redundancy with Y39A1A.12.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, GO categories,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C43H6.4 Aff_C43H6.4 P W All gene names: C43H6.4; CE33917; WBGene00016617;
WP:CE33917; XD25
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated
genes, ViswanathanM et al 2005 S2 sir-2.1 regulated
C43H6.7 Aff_C43H6.7 P W All gene names: C43H6.7; CE06958; WBGene00016620;
WP:CE06958; XD16
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C44B9.3 Aff_C44B9.3 P W All gene names: C44B9.3; 3L966; CE05405;
WBGene00008080; WP:CE05405
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C44C1.1 Aff_C44C1.1 P W All gene names: C44C1.1; CE35432; WBGene00016641;
WP:CE35432; XB601
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b Unkown,
Wang et al 2003 S4 Early genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
C44C10.1 Aff_C44C10.1 P W All gene names: col-180; C44C10.1; CE05408; NM_077559;
WBGene00000753; WP:CE05408; XM332
WormBase description: collagen
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, Reinke et al 2004, wt herm vs wt herm
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
C44C8.6 Aff_C44C8.6 P W All gene names: mak-2; C44C8.6; C44C8.6b.1; C44C8.6b.2;
4B641; CE17545; CE33566; NM_067604; NM_067605;
WBGene00007007; WP:CE17545; WP:CE33566
WormBase description: protein kinase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C44E4.6 Aff_C44E4.6 P W All gene names: acbp-1; C44E4.6; C44E4.6.1; C44E4.6.2;
C44E4.6.3; C44E4.6.4; 1F204; CE08720; NM_059011;
WBGene00016655; WP:CE08720
WormBase description: acyl-CoA-binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C44F1.3 Aff_C44F1.3 P W All gene names: lec-4; C44F1.3; 3E862; CE02163;
NM_065362; WBGene00002267; WP:CE02163
WormBase description: lec-4 encodes a predicted
galectin that exhibits sugar binding properties in
vitro.
WormBase CDS description: galactoside binding lectin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C44H4.5 Aff_C44H4.5 P W All gene names: tap-1; C44H4.5; CE08726; NM_078027;
WBGene00006524; WP:CE08726; XP209
WormBase description: Protein phosphatase 2C
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
C45G3.1 Aff_C45G3.1 P W All gene names: tag-255; C45G3.1; 1J798; CE15710;
WBGene00008107; WP:CE15710
WormBase description: The C45G3.1 gene encodes a
protein, with one N-terminal calponin-like
actin-binding domain and two IQ calmodulin-binding
domains, that is likely to be required for spindle
structure and function, and (indirectly) for neural
function, based on its orthology to Drosophila ABNORMAL
SPINDLE and on its joint sterile and uncoordinated RNAi
phenotypes; C45G3.1 is also orthologous to human ASPM
(OMIM:605481), which when mutated leads to primary
microcephaly; C45G3.1 is required for embryonic and
larval viability, germline maintenance, vulval
morphogenesis, meiosis, and locomotion.
WormBase CDS description: Actinin-type actin-binding
domain containing proteins
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, list of genes in cluster F, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen
C45G3.5 Aff_C45G3.3 P W All gene names: C45G3.5; C45G3.5.1; C45G3.5.2; CE37812;
WBGene00044008; WP:CE37812
C45G7.4 Aff_C45G7.4 P W All gene names: C45G7.4; 4D199; CE17550;
WBGene00016671; WP:CE17550
WormBase description: zinc finger protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 Resveratrol
regulate WT
C46H11.2 Aff_C46H11.2 P W All gene names: C46H11.2; 1F619; CE08784;
WBGene00016728; WP:CE08784
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes,
McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Murphy et al 2003 Fig2 Class1 elongate lifespan,
Reinke et al 2004, list of genes in cluster A, Reinke
et al 2004, list of genes in cluster order,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Climbing, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C47D12.4 Aff_C47D12.4 P W All gene names: C47D12.4; 2L969; CE20568;
WBGene00008138; WP:CE20568
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C47E12.8 Aff_C47E12.8 P W All gene names: CeCRMP/DHP-2; dhp-2; C47E12.8; 4K745;
CE05452; NM_069396; WBGene00000964; WP:CE05452
WormBase description: The dhp-2 gene encodes an
ortholog of the human gene DIHYDROPYRIMIDINASE (DPYS),
which when mutated leads to dihydropyrimidinuria
(OMIM:222748).
WormBase CDS description: Ulip like protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S4 Climbing, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
C47E8.4 Aff_C47E8.4 P W All gene names: C47E8.4; 5P164; CE35838;
WBGene00008143; WP:CE35838
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C48E7.1 Aff_C48E7.1 P W All gene names: C48E7.1; 1G839; CE08816;
WBGene00016749; WP:CE08816
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C50F2.1 Aff_C50F2.1 P W All gene names: C50F2.1; 1E461; CE36635;
WBGene00016835; WP:CE36635
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C50F2.4 Aff_C50F2.4 P W All gene names: C50F2.4; 1E456; CE08910;
WBGene00016838; WP:CE08910
C50F2.7 Aff_C50F2.7 P W All gene names: C50F2.7; 1E468; CE08913;
WBGene00016840; WP:CE08913
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C50F4.6 Aff_C50F4.6 P W All gene names: his-36; C50F4.6; 5K25; CE05471;
NM_073064; WBGene00001910; WP:CE05471
WormBase description: his-36 encodes an UNSPECIFIED
histone.
C50F4.7 Aff_C50F4.7 P W All gene names: his-37; C50F4.7; 5K27; NM_073065;
WBGene00001911
WormBase description: his-37 encodes an H4 histone.
WormBase CDS description: histone H4
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C51E3.2 Aff_C51E3.2 P W All gene names: srsx-27; C51E3.2; 5K627; CE33986;
NM_073208; WBGene00008248; WP:CE33986
WormBase description: opoid receptor
C52A10.3 Aff_C52A10.3 P W All gene names: C52A10.3; 5F716; CE17584;
WBGene00016864; WP:CE17584
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C52B9.7 Aff_C52B9.7 P W All gene names: paf-2; C52B9.7; CE30264; CE30265;
NM_171668; WBGene00003907; WP:CE30264; WP:CE30265;
XE910
WormBase description: paf-2 encodes a homolog of
vertebrate Type II Platelet-activating
factor-acetylhydrolase (PAF-AH) that is 70% identical
to PAF-2 that is required for embryogenesis and affects
organization of the hypodermis.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
C52E2.1 Aff_C52E2.I P W All gene names: fbxb-95; C52E2.1; C52E2.I; 2C127;
CE25826; WBGene00016880; WP:CE25826
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; this gene's
encoded protein also contains an FTH/DUF38 motif, which
may also mediate protein-protein interaction.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma
C52E2.6 Aff_C52E2.B P W All gene names: fbxb-97; C52E2.6; C52E2.B; 2C122;
CE36808; WBGene00016885; WP:CE36808
C53A5.3 Aff_C53A5.3 P W All gene names: gon-10; hda-1; C53A5.3; C53A5.3.1;
C53A5.3.2; 5P7; CE08952; NM_074198; WBGene00001834;
WP:CE08952
WormBase description: The hda-1 gene encodes a histone
deacetylase 1, similar to histone deacetylases RPD3
from yeast and fly; maternal and zygotic expression of
hda-1 is required for embryonic viability, and zygotic
expression of hda-1 is also required for gonadogenesis
and vulval development.
WormBase CDS description: Yeast RPD3 protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated
C53D5.5 Aff_C53D5_1638.C P W All gene names: C53D5.5; C53D5.5.1; C53D5.5.2;
C53D5.5.3; CE23612; NM_058313; WBGene00016906;
WP:CE23612
WormBase description: The C53D5.5 gene encodes an
ortholog of the human gene GAMMA-GLUTAMYLTRANSFERASE 1
(GGT1), which when mutated leads to glutathionuria
(OMIM:231950).
WormBase CDS description: gamma-glutamyltranspeptidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C53H9.2 Aff_C53H9.2 P W All gene names: C53H9.2; C53H9.2b.1; C53H9.2b.2;
C53H9.2b.3; C53H9.2b.4; C53H9.2c.1; C53H9.2c.2;
C53H9.2c.3; C53H9.2c.4; 1C307; CE08963; CE33575;
CE39907; WBGene00016907; WP:CE08963; WP:CE33575;
WP:CE39907
WormBase description: C53H9.2 encodes at least three
protein isoforms orthologous to the GTP-binding
proteins human GNL1 (HSR1; OMIM:143024) and murine
MMR1, as well as LSG1 in S. cerevisiae and many other
eukaryotic and bacterial proteins; one alternative
transcription unit of the C53H9.2 locus, C53H9.2a, has
a natural nonsense transcript that is up-regulated in
vivo by smg[-] mutations, indicating that C53H9.2 is a
natural substrate for SMG-mediated nonsense
suppresssion; C53H9.2 is required in mass RNAi assays
for embryonic viability, normally rapid growth, and
early embryonic nuclear positioning; since several
other natural mRNA substrates of SMG suppression (e.g.,
rpl-3, rpl-8, rpl-10a, rpl-12) have protein products
that are involved in translation, C53H9.2's protein
products may function in translation as well, an
inference supported by the observed role of LSG1 in
cytoplasmic 60S ribosomal subunit biogenesis.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C54G7.2 Aff_C54G7.2 P W All gene names: C54G7.2; C54G7.2.1; C54G7.2.2; CE04270;
WBGene00016934; WP:CE04270; XG140
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster A,
Reinke et al 2004, list of genes in cluster order,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C55A6.9 Aff_C55A6.9 P W All gene names: C55A6.9; 5M3; CE20614; WBGene00008338;
WP:CE20614
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
D1007.6 Aff_D1007.6 P W All gene names: rps-10; D1007.6; D1007.6.1; D1007.6.2;
1F152; CE09041; NM_058997; WBGene00004479; WP:CE09041
WormBase description: rps-10 encodes a small ribosomal
subunit S10 protein.
WormBase CDS description: 40S ribosomal protein S10
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
D1009.1 Aff_D1009.1 P W All gene names: D1009.1; CE04285; CE27891;
WBGene00017012; WP:CE04285; WP:CE27891; XJ557
WormBase description: fatty acid transporter protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes
pass two-wayANOVA P0
D1022.4 Aff_D1022.4 P W All gene names: D1022.4; 2H746; CE02578;
WBGene00017023; WP:CE02578
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
D1044.1 Aff_D1044.1 P W All gene names: D1044.1; 3G635; CE39140;
WBGene00017027; WP:CE39140
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
D1046.1 Aff_D1046.1 P W All gene names: D1046.1; D1046.1.1; D1046.1.2;
D1046.1.3; D1046.1.4; 4J693; CE03094; WBGene00008362;
WP:CE03094
WormBase description: glycine-rich RNA-binding protein
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
oogenesis enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen
D1053.1 Aff_D1053.1 P W All gene names: gst-42; D1053.1; CE03099; NM_077561;
WBGene00001790; WP:CE03099; XM346
WormBase description: gst-42 is orthologous to the
human gene GLUTATHIONE TRANSFERASE ZETA-1 (also known
as MALEYLACETOACETATE ISOMERASE; GSTZ1; OMIM:603758),
which when mutated is thought to lead to a variety of
type I tyrosinemia.
WormBase CDS description: glutathione S-transferase
Member of lists (Publications lists):
Kwon et al 2004 T1 late-repression
Ethanol-respon, McCarroll et al 2004 SFig1-4 conserved
w/ Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
Romagnolo et al 2002 Fig3b Oxidation, ViswanathanM et
al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4
Climbing, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
D1081.2 Aff_D1081.2 P W All gene names: unc-120; D1081.2; 1J37; CE05534;
NM_059895; WBGene00006844; WP:CE05534
WormBase description: unc-120 encodes a member of the
MADS-box family of transcription factors that contains
human and Drosophila serum response factor (SRF) and
Saccharomyces cerevisiae MCM1 and ARG80; UNC-120 is
required for locomotion and muscle development and for
formation of the normal number of muscle A and I bands;
UNC-120 is also required for maintaining wild-type
expression levels of the muscle components actin and
myosin; UNC-120 is first expressed in the early embryo
in body wall muscle precursors and later is expressed
in both body wall and vulval muscles.
WormBase CDS description: MADS domain
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes,
McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, list of genes in cluster A, Reinke
et al 2004, list of genes in cluster order
D1081.8 Aff_D1081.8 P W All gene names: phi-7; D1081.8; D1081.8.1; D1081.8.2;
1J71; CE05540; WBGene00008386; WP:CE05540
WormBase description: MYB transforming protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, GO
categories, Reinke et al 2004, list of genes in cluster
E
D2045.7 Aff_D2045.7 P W All gene names: D2045.7; 3L565; CE37761;
WBGene00008424; WP:CE37761
WormBase description: serine/threonine kinase
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
Reinke et al 2004, mixed sperm soma, Reinke et al 2004,
GO categories, Reinke et al 2004, fem3 enriched genes,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
D2089.1 Aff_D2089.1 P W All gene names: rsp-7; D2089.1; D2089.1b.1; D2089.1b.2;
D2089.1b.3; 2K951; CE03111; CE30507; NM_171033;
NM_171034; WBGene00004704; WP:CE03111; WP:CE30507
WormBase description: RNA binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes
D2092.2 Aff_D2092.2 P W All gene names: D2092.2; D2092.2.1; D2092.2.2; 1H202;
CE09101; WBGene00017064; WP:CE09101
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, ViswanathanM et al
2005 S2 sir-2.1 regulated
DY3.2 Aff_DY3.2 P W All gene names: lmn-1; DY3.2; DY3.2.1; DY3.2.2; 1J341;
CE15746; Lam1; NM_059970; WBGene00003052; WP:CE15746
WormBase description: The lmn-1 gene encodes a nuclear
lamin; LMN-1 protein is essential for the nuclear
envelope localization of emerin (EMR-1) protein during
during early development.
WormBase CDS description: Intermediate filament
proteins (2 domains)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
E01A2.2 Aff_E01A2.H P W All gene names: E01A2.2; E01A2.2b.1; E01A2.2b.2; 1E703;
CE20643; CE33369; WBGene00017085; WP:CE20643;
WP:CE33369
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen
E01A2.4 Aff_E01A2.D, Aff_E01A2.E, Aff_E01A2.F P W All gene names: E01A2.4; 1E698; CE24871;
WBGene00017086; WP:CE24871
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, list of genes in cluster F, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, ViswanathanM et
al 2005 S2 sir-2.1 regulated
E02D9.1 Aff_C37A2.1 P W All gene names: C37A2.1; E02D9.1; E02D9.1b.1;
E02D9.1b.2; 1H379; CE08610; CE27902; CE31335; CE31336;
WBGene00017098; WP:CE08610; WP:CE27902; WP:CE31335;
WP:CE31336
WormBase description: protein kinase
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Murphy et al 2003 Fig2 Class2 shorten lifespan, Reinke
et al 2004, fem1 enriched genes, Reinke et al 2004,
oogenesis enriched genes, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA,
Wang et al 2003 S4 Early genes, Wang et al 2003 S4
genes pass two-wayANOVA P0
E02H1.4 Aff_E02H1.4 P W All gene names: pme-2; E02H1.4; 2J883; CE01539;
WBGene00004050; WP:CE01539
WormBase description: ADP-Ribosyltransferase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
E04F6.2 Aff_E04F6.2 P W All gene names: E04F6.2; 2H491; CE01214;
WBGene00017122; WP:CE01214
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
EEED8.4 Aff_EEED8.4 P W All gene names: EEED8.4; 2F699; CE39716;
WBGene00017135; WP:CE39716
WormBase description: Probable RNA binding protein
F01D4.5 Aff_F01D4.5 P W All gene names: F01D4.5; 4L248; CE29035; CE29036;
WBGene00008488; WP:CE29035; WP:CE29036
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, ViswanathanM
et al 2005 S2 sir-2.1 regulated
F01F1.6 Aff_F01F1.6 P W All gene names: alh-9; F01F1.6; F01F1.6.1; F01F1.6.2;
F01F1.6.3; 3G947; CE39486; NM_065862; WBGene00000115;
WP:CE39486
WormBase description: Aldehyde dehydrogenase
Member of lists (Publications lists):
Baugh et al 2005, PAL-1 target genes,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S4 Early genes, Wang et al 2003 S3 genes
pass one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F01G10.7 Aff_F01G10.7 P W All gene names: F01G10.7; 4L4; CE09169; WBGene00008510;
WP:CE09169
WormBase description: triacylglycerol lipase
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05
F02E9.10 Aff_F02E9.6 P W All gene names: F02E9.10; F02E9.10a.1; F02E9.10a.2;
F02E9.10b.1; F02E9.10b.2; 1J4; CE27119; CE38314;
WBGene00008533; WP:CE27119; WP:CE38314
F07A11.5 Aff_F07A11.5 P W All gene names: F07A11.5; 2L903; CE03147;
WBGene00008548; WP:CE03147
WormBase description: ribokinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F07C3.9 Aff_F07C3.9 P W All gene names: F07C3.9; 5J734; CE07030;
WBGene00017197; WP:CE07030
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, Reinke et al 2004, IVb male soma enriched
genes, ViswanathanM et al 2005 S2 daf-16 Resveratrol,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
F07E5.2 Aff_F07E5.2 P W All gene names: fbxb-35; F07E5.2; 2C343; CE09215;
WBGene00017208; WP:CE09215
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; its encoded
protein also contains a Pfam-B45 motif of presently
unknown function.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F07E5.6 Aff_F07E5.6 P W All gene names: fbxb-36; F07E5.6; 2C348; CE09218;
WBGene00017211; WP:CE09218
Member of lists (Publications lists):
Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, fem3 enriched genes
F08B4.5 Aff_F08B4.5 P W All gene names: F08B4.5; 4J448; CE29749;
WBGene00017237; WP:CE29749
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F08B4.7 Aff_F08B4.7 P W All gene names: F08B4.7; F08B4.7.1; F08B4.7.2; 4J452;
CE09232; WBGene00017238; WP:CE09232
WormBase description: U1 small nuclear
ribonucleoprotein C
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F08B6.2 Aff_F08B6.E P W All gene names: gpc-2; F08B6.2; F08B6.2.1; F08B6.2.2;
F08B6.2.3; 1H335; CE20656; NM_059534; WBGene00001682;
WP:CE20656
WormBase description: gpc-2 encodes one of two C.
elegans heterotrimeric G protein gamma subunits; gpc-2
is required, along with its partner GPB-1, a G protein
beta subunit, for proper mitotic spindle positioning
and orientation during early embryonic cell divisions;
to date, GPC-2 expression has been reported in
electrically excitable cells (all neurons and muscles).
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F08C6.2 Aff_F08C6.2 P W All gene names: F08C6.2; CCT; CE30937; CE39144;
WBGene00017241; WP:CE30937; WP:CE39144; XI199
WormBase description: F08C6.2 encodes a lipid-activated
CTP:phosphocholine cytidylyltransferase (CCT), with CCT
activity in vitro; recombinant F08C6.2 enzyme is most
activated by a 1:1 mixture of
phosphatidylcholine:oleate vesicles; a inhibitory
21-residue segment (residues 246-266) is critical for
specific activation of F08C6.2 by lipids, since
deletion or mutation of this segment causes F08C6.2 to
be constitutively active without its normal lipid
substrate; F08C6.2 has no obvious function in mass RNAi
assays.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S4 Early genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
F08D12.11 Aff_F08D12.11 P W All gene names: fbxb-111; F08D12.11; 2D64; CE09244;
WBGene00017254; WP:CE09244
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; its encoded
protein also contains a Pfam-B45 motif of presently
unknown function.
F08D12.8 Aff_F08D12.8 P W All gene names: fbxb-105; F08D12.8; 2D58; CE09241;
WBGene00017251; WP:CE09241
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; its encoded
protein also contains a Pfam-B45 motif of presently
unknown function.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F08D12.9 Aff_F08D12.9 P W All gene names: fbxb-109; sdz-10; F08D12.9; 2D60;
CE09242; WBGene00017252; WP:CE09242
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; its encoded
protein also contains a Pfam-B45 motif of presently
unknown function.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F08F1.5 Aff_F08F1.5 P W All gene names: ced-8; F08F1.5; CE34294; NM_077026;
WBGene00000422; WP:CE34294; XJ34
WormBase description: The ced-8 gene encodes a homolog
of the human putative membrane transporter XK; ced-8 is
required for apoptosis to occur with normal speed
during embryonic development.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster E
F08G12.2 Aff_F08G12.2 P W All gene names: F08G12.2; CE18578; WBGene00008586;
WP:CE18578; XL916
WormBase description: WD domain, G-beta repeat (6
domains)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
F08G2.3 Aff_F08G2.3 P W All gene names: his-42; F08G2.3; 2O120; NM_064498;
WBGene00001916
WormBase description: his-42 encodes an H3 histone.
WormBase CDS description: Core histones H2A, H2B, H3
and H4
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
F08G2.7 Aff_F08G2.7 P W All gene names: F08G2.7; 2O128; CE19779;
WBGene00008578; WP:CE19779
F08G2.8 Aff_F08G2.8 P W All gene names: F08G2.8; 2O145; CE19780;
WBGene00008579; WP:CE19780
F09C3.4 Aff_F09C3.4 P W All gene names: fbxa-103; F09C3.4; 1O876; CE09279;
WBGene00008612; WP:CE09279
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; this gene's
encoded protein also contains an FTH/DUF38 motif, which
may also mediate protein-protein interaction.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F09E5.10 Aff_F09E5.10 P W All gene names: F09E5.10; 2F638; CE02605;
WBGene00017288; WP:CE02605
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F09F7.8 Aff_F09F7.8 P W All gene names: nspb-12; F09F7.8; 3G656; CE38594;
WBGene00017305; WP:CE38594
WormBase description: nspb family
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F09G2.4 Aff_F09G2.4 P W All gene names: F09G2.4; 5H661; CE09299;
WBGene00017313; WP:CE09299
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, list of genes in cluster F, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, ViswanathanM et
al 2005 S2 daf-16 Resveratrol
F10C5.1 Aff_Y55B1A_115.C P W All gene names: apc-8; mat-3; pod-4; vex-2; F10C5.1;
F10C5.1.1; F10C5.1.2; 3B99; CE26888; NM_064802;
WBGene00003134; WBGene00006909; WP:CE26888
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, Fig2b shared gemlines, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, intrinsic, Reinke et al 2004, wt vs glp-4
enriched genes, Reinke et al 2004, wt males vs glp4
male enriched , Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F10D2.6 Aff_F10D2.6 P W All gene names: ugt-37; F10D2.6; 5H616; CE30747;
WBGene00017332; WP:CE30747
WormBase description: 7TM chemoreceptor, ugt family
Member of lists (Publications lists):
Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang
et al 2003 S4 genes pass two-wayANOVA P0
F10E9.8 Aff_F10E9.8 P W All gene names: dcd-1; sas-4; F10E9.8; 3J404; CE29756;
NM_066427; WBGene00004726; WP:CE29756
WormBase description: sas-4 encodes a predicted
coiled-coil protein and centriole component recruited
to the centrosome once per cell cycle at the time of
organelle duplication and is required for centriole
duplication and spindle assembly, levels dictate
centrosome size, and also affects germ cell
proliferation and locomotion; colocalizes with
gamma-tubulin to centrosomes both in sperm and in the
syncitial part of the gonad.
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated
genes, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004,
oogenesis enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen
F11H8.1 Aff_F11H8.1 P W All gene names: cyk-5; rfl-1; uba-3; F11H8.1; 3I113;
CE34538; NM_066133; WBGene00004341; WP:CE34538
WormBase description: rfl-1 (also known as cyk-5)
encodes an ortholog of UBA3, a Nedd8 activating enzyme
for ubiquitin-like proteins, which is required for
proper cytokinesis and spindle orientation; NED-8 is
presumably activated by an ULA-1/RFL-1 heterodimer.
WormBase CDS description: ubiquitin-activating enzyme
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 Resveratrol regulate WT
F13B10.2 Aff_F13B10.2 P W All gene names: rpl-3; F13B10.2; F13B10.2a.1;
F13B10.2a.2; F13B10.2d.1; F13B10.2d.2; 3E959; CE05598;
CE36996; CE36997; NM_065382; WBGene00004414;
WP:CE05598; WP:CE36996; WP:CE36997
WormBase description: rpl-3 encodes a large ribosomal
subunit L3 protein required in mass RNAi assays for
embryonic and larval viability, fertility, and general
health; the rpl-3 transcription unit has a nonsense
transcript that is up-regulated in vivo by smg[-]
mutations, indicating that rpl-3 is a natural substrate
for SMG-mediated nonsense suppresssion; several other
natural mRNA substrates of SMG suppression (e.g.,
rpl-7, rpl-10, rpl-12) have protein products that are
involved in translation.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F13B12.1 Aff_F13B12.1 P W All gene names: F13B12.1; F13B12.1.1; F13B12.1.2;
4L188; CE05599; WBGene00008729; WP:CE05599
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F13B9.1 Aff_F13B9.1 P W All gene names: F13B9.1; CE30949; CE35469; CE37100;
WBGene00017419; WP:CE30949; WP:CE35469; WP:CE37100;
XI911
WormBase description: F13B9.1 encodes two proteins by
alternative splicing which contain both an
immunoglobulin/MHC-like domain and a
glutamine/asparagine-rich domain.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F13C5.2 Aff_F13C5.2 P W All gene names: F13C5.2; CE19384; WBGene00017423;
WP:CE19384; XB213
WormBase description: bromodomain-containing protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
A, Reinke et al 2004, list of genes in cluster order,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F13E6.1 Aff_F13E6.1 P W All gene names: F13E6.1; CE31474; WBGene00008745;
WP:CE31474; XL294
WormBase description: D52 protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
F13G3.10 Aff_F13G3.10 P W All gene names: F13G3.10; CE17660; NM_059669;
WBGene00008768; WP:CE17660
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F13H8.7 Aff_F13H8.7 P W All gene names: F13H8.7; F13H8.7.1; F13H8.7.2;
F13H8.7.3; 2G578; CE02641; WBGene00017440; WP:CE02641
WormBase description: beta-ureidopropionase (rat)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
F14B6.3 Aff_F14B6.3 P W All gene names: F14B6.3; 1M823; CE17665;
WBGene00008784; WP:CE17665
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F14B6.6 Aff_F14B6.6 P W All gene names: F14B6.6; 1M825; CE25856;
WBGene00008787; WP:CE25856
Member of lists (Publications lists):
Wang et al 2003 S4 TransientList,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0
F14E5.4 Aff_F14E5.4 P W All gene names: F14E5.4; 2I720; CE03207;
WBGene00008802; WP:CE03207
WormBase description: acid phosphatase
Member of lists (Publications lists):
Reinke et al 2004, male sperm, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, fem3 enriched genes, Reinke et al 2004, wt
males vs glp4 male enriched , Reinke et al 2004, mixed
sperm soma, Reinke et al 2004, list of genes in cluster
D, Reinke et al 2004, herm soma enriched genes, Reinke
et al 2004, GO categories
F14H3.3 Aff_F14H3.3 P W All gene names: F14H3.3; 5Q532; CE23651;
WBGene00008822; WP:CE23651
Member of lists (Publications lists):
Golden et al 2004, daf-2
differentially expressed , Reinke et al 2004,
intrinsic, Reinke et al 2004, wt vs glp-4 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F15A4.2 Aff_F15A4.2 P W All gene names: F15A4.2; 2M755; CE15839;
WBGene00008838; WP:CE15839
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
F15B10.2 Aff_F15B10.2 P W All gene names: drh-1; F15B10.2; F15B10.2.1;
F15B10.2.2; 4H372; CE16988; NM_068617; WBGene00001090;
WP:CE16988
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen
F15C11.2 Aff_F15C11.2 P W All gene names: F15C11.2; 1H603; CE09413; CE31479;
CE31480; WBGene00008852; WP:CE09413; WP:CE31479;
WP:CE31480
WormBase description: Ubiquitin family
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F16H11.2 Aff_F16H11.2 P W All gene names: F16H11.2; CE04397; WBGene00017531;
WP:CE04397; XF281
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F17A9.2 Aff_F17A9.2 P W All gene names: F17A9.2; 5G593; CE19798;
WBGene00017534; WP:CE19798
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order, Wang
et al 2003 S5 genes common to feeding ANOVA, Wang et
al 2003 S3 genes pass one-way ANOVA
F17A9.5 Aff_F17A9.5 P W All gene names: F17A9.5; 5G592; CE09449;
WBGene00017537; WP:CE09449
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1
elongate lifespan, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S6 removed genes of
contamination
F17A9.6 Aff_F17A9.6 P W All gene names: ceh-49; F17A9.6; 5G600; CE27970;
WBGene00017538; WP:CE27970
WormBase description: F17A9.6 encodes a divergent
ONECUT class CUT homeobox protein with a single
N-terminal cut domain; F17A9.6 has an atypical tyrosine
residue at position 48 of its homeodomain rather than a
