Gene name Source Gene ID Annotation Date Added by
6R55.1 Aff_6R55.1 P W All gene names: 6R55.1; CE19652; CE26787;
WBGene00007068; WP:CE19652; WP:CE26787; XS331
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
AFF_AC8.J Aff_AC8.J P W
AFF_B0413.D Aff_B0413.D P W
AFF_C06G1.3 Aff_C06G1.3 P W
AFF_C23H3.4 Aff_C23H3.4 P W
AFF_C25A1.6 Aff_C25A1.6 P W
AFF_C25H3.3 Aff_C25H3.3 P W
AFF_C33A11.2 Aff_C33A11.2 P W
AFF_C35D10.1 Aff_C35D10.1 P W
AFF_C45E1.4 Aff_C45E1.4 P W
AFF_C46A5.6 Aff_C46A5.6 P W
AFF_C49A1.8 Aff_C49A1.8 P W
AFF_C50F2.2 Aff_C50F2.2 P W
AFF_E01A2.I Aff_E01A2.I P W
AFF_F07H5.5 Aff_F07H5.5 P W
AFF_F09E5.4 Aff_F09E5.4 P W
AFF_F10G7.10 Aff_F10G7.10 P W
AFF_F15A4.1 Aff_F15A4.1 P W
AFF_F20D12.5 Aff_F20D12.5 P W
AFF_F21H12.1 Aff_F21H12.1 P W
AFF_F22D6.13 Aff_F22D6.13 P W
AFF_F22E5.15 Aff_F22E5.15 P W
AFF_F23A7.6 Aff_F23A7.6 P W
AFF_F23F12.2 Aff_F23F12.2 P W
AFF_F26F4.8 Aff_F26F4.8 P W
AFF_F28B3.6 Aff_F28B3.6 P W
AFF_F32A5.7 Aff_F32A5.7 P W
AFF_F36H2.2 Aff_F36H2.2 P W
AFF_F36H5.7 Aff_F36H5.7 P W
AFF_F39E9.3 Aff_F39E9.3 P W
AFF_F43C11_37.B Aff_F43C11_37.B P W
AFF_F44A2.6 Aff_F44A2.6 P W
AFF_F44B9.8 Aff_F44B9.8 P W
AFF_F45E6.5 Aff_F45E6.5 P W
AFF_F46B6.3 Aff_F46B6.3 P W
AFF_F48A11.6 Aff_F48A11.6 P W
AFF_F49H12.D Aff_F49H12.D P W
AFF_F52C12.2 Aff_F52C12.2 P W
AFF_F52G2.2 Aff_F52G2.2 P W
AFF_F53C3.9 Aff_F53C3.9 P W
AFF_F56A11.1 Aff_F56A11.1 P W
AFF_K02B12.5 Aff_K02B12.5 P W
AFF_K07F5.14 Aff_K07F5.14 P W
AFF_K10C9.2 Aff_K10C9.2 P W
AFF_K11D12.7 Aff_K11D12.7 P W
AFF_R06A4.3 Aff_R06A4.3 P W
AFF_R07E5.12 Aff_R07E5.12 P W
AFF_R07G3.4 Aff_R07G3.4 P W
AFF_R11D1.9 Aff_R11D1.9 P W
AFF_R11G1.2 Aff_R11G1.2 P W
AFF_R144.3 Aff_R144.3 P W
AFF_T01G9.2 Aff_T01G9.2 P W
AFF_T05H4.8 Aff_T05H4.8 P W
AFF_T05H4.9 Aff_T05H4.9 P W
AFF_T08B2.9 Aff_T08B2.9 P W
AFF_T13C5.6 Aff_T13C5.6 P W
AFF_T27E9.7 Aff_T27E9.7 P W
AFF_W10G11.19 Aff_W10G11.19 P W
AFF_Y105E8A.H Aff_Y105E8A.H P W
AFF_Y105E8A.L Aff_Y105E8A.L P W
AFF_Y113G7A.I Aff_Y113G7A.I P W
AFF_Y116A8A.LL Aff_Y116A8A.LL P W
AFF_Y13C8_223.D Aff_Y13C8_223.D P W
AFF_Y25C1A.A Aff_Y25C1A.A P W
AFF_Y32F6A.1 Aff_Y32F6A.1 P W
AFF_Y34D9A_150.D Aff_Y34D9A_150.D P W
AFF_Y37D8A.21 Aff_Y37D8A.21 P W
AFF_Y38A10A.B Aff_Y38A10A.B P W
AFF_Y38A10A.C Aff_Y38A10A.C P W
AFF_Y38F2A_6126.E Aff_Y38F2A_6126.E P W
AFF_Y39B6.R Aff_Y39B6.R P W
AFF_Y39G10A_246.I Aff_Y39G10A_246.I P W
AFF_Y40H7.D Aff_Y40H7.D P W
AFF_Y41D4A_2491.A Aff_Y41D4A_2491.A P W
AFF_Y46B2_176.B Aff_Y46B2_176.B P W
AFF_Y49E10.G Aff_Y49E10.G P W
AFF_Y4C6A.D Aff_Y4C6A.D P W
AFF_Y4C6A.J Aff_Y4C6A.J P W
AFF_Y53F4B.H Aff_Y53F4B.H P W
AFF_Y53G8A_2706.A Aff_Y53G8A_2706.A P W
AFF_Y53G8B_93.E Aff_Y53G8B_93.E P W
AFF_Y54E10A_159.C Aff_Y54E10A_159.C P W
AFF_Y55B1B_119.E Aff_Y55B1B_119.E P W
AFF_Y55F3A_746.B Aff_Y55F3A_746.B P W
AFF_Y59A8A.H Aff_Y59A8A.H P W
AFF_Y59A8A.U Aff_Y59A8A.U P W
AFF_Y63D3A.1 Aff_Y63D3A.1 P W
AFF_Y71F9A_294.B Aff_Y71F9A_294.B P W
AFF_Y71H2_389.E Aff_Y71H2_389.E P W
AFF_Y73F8A.X Aff_Y73F8A.X P W
AFF_Y75B8A.U Aff_Y75B8A.U P W
AFF_Y77E11A_3443.Q Aff_Y77E11A_3443.Q P W
AFF_Y81G3A.A Aff_Y81G3A.A P W
AFF_ZC395.7 Aff_ZC395.7 P W
AFF_ZK105_3.G Aff_ZK105_3.G P W
AFF_ZK1128.1 Aff_ZK1128.1 P W
AFF_ZK1236.5 Aff_ZK1236.5 P W
AFF_ZK688.7 Aff_ZK688.7 P W
AFF_ZK783.4 Aff_ZK783.4 P W
B0001.6 Aff_B0001.6 P W All gene names: B0001.6; B0001.6.1; B0001.6.2;
B0001.6.3; 4M927; CE31863; WBGene00007091; WP:CE31863
B0001.7 Aff_B0001.7 P W All gene names: B0001.7; 4M916; CE05145;
WBGene00007092; WP:CE05145
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, ViswanathanM et al
2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005
S2 sir-2.1 regulated
B0024.12 Aff_B0024.12 P W All gene names: gna-1; B0024.12; 5K800; CE05156;
CeGNA1; NM_073253; WBGene00001646; WP:CE05156
WormBase description: gna-1 encodes one of two C.
elegans glucosamine 6-phosphate N-acetyltransferases
(GNAs); by homology, GNA-1 is predicted to be required
for the formation of UDP-N-acetylglucosamine, a
substrate in chitin synthesis, Golgi and cytoplasmic
glycosylation, and GPI anchoring; as loss of gna-1
activity via large-scale RNAi screens does not result
in any obvious abnormalities, the precise role of GNA-1
in C. elegans development and/or behavior is not yet
known.
WormBase CDS description: Acetyltransferase (GNAT)
family
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Wang et al 2003 S4 Climbing, Wang et al 2003
S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
B0025.1 Aff_B0025.1 P W All gene names: let-512; vps-34; B0025.1; B0025.1b.1;
B0025.1b.2; B0025.1c.1; B0025.1c.2; B0025.1d.1;
B0025.1d.2; 1G609; CE24759; CE24760; CE37691; CE37738;
CE37739; NM_059340; WBGene00006932; WP:CE24759;
WP:CE24760; WP:CE37691; WP:CE37738; WP:CE37739
WormBase description: The vps-34 gene encodes an
ortholog of the phosphoinositide 3-kinase VPS34 in S.
cerevisiae, a protein that regulates multiple steps in
endocytosis, and that is required for growth at normal
rates during development.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0035.11 Aff_B0035.11 P W All gene names: B0035.11; 4M94; CE05166;
WBGene00007110; WP:CE05166
WormBase description: Yeast LEO1 protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0035.14 Aff_B0035.14 P W All gene names: dnj-1; B0035.14; 4M69; CE05169;
NM_069721; WBGene00001019; WP:CE05169
WormBase description: This gene encodes a protein
containing a DnaJ ('J') domain.
WormBase CDS description: DNAJ protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0035.4 Aff_B0035.4 P W All gene names: tag-317; B0035.4; B0035.4.1; B0035.4.2;
B0035.4.3; 4M79; 4M81; CE05162; WBGene00007107;
WP:CE05162
WormBase description: paramyosin like
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated
B0035.7 Aff_F54E12.5 P W All gene names: his-47; B0035.7; 4M88; NM_069730;
WBGene00001921; his 12
WormBase description: his-47 encodes an H2A histone; by
homology, HIS-47 is predicted to function as a
nucleosome component required for packaging of DNA into
chromatin; his-47 is a replication-dependent histone
locus that resides in a histone gene-rich region on
chromosome IV.
WormBase CDS description: histone H2A
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
B0035.9 Aff_F54E12.3 P W All gene names: his-46; B0035.9; 4M90; NM_069732;
WBGene00001920
WormBase description: his-46 encodes an H4 histone.
WormBase CDS description: histone H4
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0041.2 Aff_B0041.2 P W All gene names: B0041.2; B0041.2a.1; B0041.2a.2; 1F227;
CE27563; CE29526; CE33546; WBGene00015007; WP:CE27563;
WP:CE29526; WP:CE33546
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0041.3 Aff_B0041.3 P W All gene names: B0041.3; 1F213; CE07668;
WBGene00015008; WP:CE07668
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0041.4 Aff_B0041.4 P W All gene names: rpl-4; B0041.4; B0041.4.1; B0041.4.2;
B0041.4.3; 1F214; CE07669; NM_059015; WBGene00004415;
WP:CE07669
WormBase description: rpl-4 encodes a large ribosomal
subunit L4 protein.
WormBase CDS description: ribosomal protein L1
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0041.7 Aff_B0041.7 P W All gene names: slr-8; xnp-1; B0041.7; 1F234; CE17314;
NM_059022; WBGene00006961; WP:CE17314
WormBase description: xnp-1 encodes an ATP-dependent
DNA helicase of the SNF2 family that is orthologous to
human XNP/ATR-X, which is associated with a number of
X-linked mental retardation syndromes; in C. elegans,
xnp-1 activity is required at high temperatures for
embryogenesis, somatic gonad development, fertility,
and vulval morphogenesis; in addition, animals doubly
mutant for xnp-1 and lin-35/Rb, hpl-2/HP1, or
nucleosome remodelling and histone deacetylase (NuRD)
complex members such as lin-53 and let-418, display
larval arrest with growth cessation but continued cell
proliferation; xnp-1 is also required, with lin-35/Rb
and hpl-2/HP1, for proper regulation of transgene
expression; xnp-1 mRNA, detectable in embryos and the
germline by in situ hybridization, is expressed at
highest levels in embryos with decreasing levels seen
in successive larval stages; xnp-1 transcriptional
reporter fusions exhibit strong expression beginning at
mid-embryogenesis but fading by embryonic
morphogenesis; at hatching, expression is observed in
all dividing cells including the P lineage, and at
later larval stages expression is observed in the
vulval precursor cells.
WormBase CDS description: helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
B0205.6 Aff_B0205.6 P W All gene names: B0205.6; 1L315; CE30405;
WBGene00015021; WP:CE30405
WormBase description: aminotransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
B0205.7 Aff_B0205.7 P W All gene names: kin-3; B0205.7; B0205.7.1; B0205.7.2;
1L311; CE17321; NM_060410; WBGene00002191; WP:CE17321
WormBase description: kin-3 encodes an ortholog of the
catalytic subunit of casein kinase II alpha, which in
Drosophila and mammals is required for normal circadian
rhythms, and which directly phosphorylates the
Drosophila PERIOD protein (which itself regulates
circadian rhythms); by analogy, KIN-3 might be expected
to help regulate heterochronic functions dependent on
such proteins as LIN-42.
WormBase CDS description: casein kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0205.8 Aff_B0205.8 P W All gene names: B0205.8; 1L306; CE17322;
WBGene00015022; WP:CE17322
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0213.3 Aff_B0213.3 P W All gene names: nlp-28; B0213.3; 5E463; CE16774;
NM_071709; WBGene00003766; WP:CE16774
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S6 removed genes of
contamination
B0218.1 Aff_B0218.1 P W All gene names: B0218.1; B0218.1a.1; B0218.1a.2;
B0218.1a.3; B0218.1a.4; B0218.1a.5; B0218.1b.1;
B0218.1b.2; B0218.1b.3; 4I925; CE06684; CE33351;
WBGene00015047; WP:CE06684; WP:CE33351
WormBase description: amidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0228.7 Aff_B0228.7 P W All gene names: B0228.7; 2I48; CE34630; WBGene00015064;
WP:CE34630
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0238.10 Aff_B0238.10 P W All gene names: B0238.10; 5F753; CE07700;
WBGene00015074; WP:CE07700
WormBase description: acyltransfersase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster E
B0238.11 Aff_B0238.11 P W All gene names: B0238.11; B0238.11.1; B0238.11.2;
5F747; CE07701; WBGene00015075; WP:CE07701
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0250.1 Aff_B0250.1 P W All gene names: rpl-2; B0250.1; B0250.1.1; B0250.1.2;
5U949; CE18478; NM_075539; WBGene00004413; WP:CE18478
WormBase description: rpl-2 encodes a large ribosomal
subunit L8 protein.
WormBase CDS description: Ribosomal Proteins L2
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0252.3 Aff_B0252.3 P W All gene names: B0252.3; B0252.3c.1; B0252.3c.2; 2H194;
CE30586; CE32095; CE34631; WBGene00015088; WP:CE30586;
WP:CE32095; WP:CE34631
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0252.4 Aff_B0252.4 P W All gene names: cyn-10; cyp-10; B0252.4; 2H202;
CE02420; CE27567; NM_063015; WBGene00000886;
WP:CE02420; WP:CE27567
WormBase description: cyp-10 encodes a divergent
cyclophilin isoform that is functional when expressed
in E. coli.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0261.2 Aff_B0261.2 P W All gene names: CE-TOR; let-363; B0261.2; 1F831;
CE32559; CE32560; CeTor; NM_059148; NM_059151;
WBGene00002583; WP:CE32559; WP:CE32560
WormBase description: let-363 encodes, by alternative
splicing, two large (>2600-residue) proteins with
C-terminal similarity to phosphatidylinositol kinase
(PIK); LET-363 proteins are orthologous to S.
cerevisiae Tor1p and Tor2p and human FRAP1
(OMIM:601231, mammalian target of FKBP12-rapamycin);
LET-363 proteins are required for progression through
the L3 stage of larval development and are thought to
generally stimulate translation of most or all mRNAs
('global translation'); LET-363 activity is also
necessary for normal development and physiology of the
intestine; LET-363 proteins are expressed ubiquitously,
including a maternal contribution to the early embryo.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
B0280.10 Aff_B0280.10 P W All gene names: B0280.10; 3I222; CE29533;
WBGene00015105; WP:CE29533
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0280.3 Aff_B0280.3 P W All gene names: B0280.3; B0280.3.1; B0280.3.2; 3I213;
CE00733; WBGene00015101; WP:CE00733
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0280.8 Aff_B0280.8 P W All gene names: nhr-10; B0280.8; 3I202; CE00815;
NM_066153; WBGene00003609; WP:CE00815
WormBase description: nhr-10 encodes a predicted
nuclear hormone receptor diverged from nuclear hormone
receptors in other phyla; its mRNA is expressed
throughout development with possibly lower expression
from the L4 larval to adult stages, and the protein is
expressed in neuronal processes.
WormBase CDS description: retinoic acid
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0281.5 Aff_B0281.5 P W All gene names: B0281.5; 2C588; CE07716;
WBGene00015112; WP:CE07716
Member of lists (Publications lists):
Jiang et al 2001 Fig1
hermaphrodite-enriched neuro, Jones et al 2001 Non
dauer genes P<0.05, Murphy et al 2003 Fig2 Class2
shorten lifespan, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, intrinsic, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
GO categories, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0284.3 Aff_B0284.3 P W All gene names: B0284.3; 3F468; CE28525;
WBGene00007133; WP:CE28525
B0285.4 Aff_B0285.4 P W All gene names: B0285.4; 3F433; CE00643;
WBGene00007137; WP:CE00643
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, ViswanathanM et al 2005
S2 sir-2.1 regulated
B0285.9 Aff_B0285.9 P W All gene names: ckb-2; B0285.9; 3F459; CE33591;
NM_065479; WBGene00000512; WP:CE33591
WormBase description: choline kinase
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
Romagnolo et al 2002 Fig5 genes in let-60 timecour,
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et
al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 Early
genes, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0303.15 Aff_B0303.15 P W All gene names: B0303.15; 3J807; CE00004;
WBGene00015133; WP:CE00004
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: Ribosomal protein L11
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
B0303.7 Aff_B0303.7 P W All gene names: B0303.7; 3J787; CE36521;
WBGene00015128; WP:CE36521
WormBase description: Neutrophil oxidase factor
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
B0304.1 Aff_B0304.1 P W All gene names: hlh-1; B0304.1; 2E811; CE02423;
CE30067; CE31766; MyoD1; WBGene00001948; WP:CE02423;
WP:CE30067; WP:CE31766
WormBase description: hlh-1 encodes a basic
helix-loop-helix (bHLH) transcription factor that is
the sole C. elegans member of the myogenic regulatory
factor (MRF) subgroup of bHLH proteins; in C. elegans,
HLH-1 activity is required during embryonic development
for the proper differentiation and function of body
wall muscle cells, indicating that unlike its
vertebrate counterparts, hlh-1 is not absolutely
required for body wall muscle specification; however,
ectopic expression of hlh-1 in the embryo is sufficient
to convert nearly all embryonic cell types to a
muscle-like fate; in regulating body wall muscle cell
development in some cell lineages, hlh-1 likely lies
downstream of the PAL-1 homeodomain protein that is
required for specification of the C and D founder cell
fates; HLH-1 is expressed in nuclei and first appears
in body wall muscle precursors beginning at the
~80-cell stage of embryogenesis; expression then
continues in these cells and their differentiated
descendants throughout embryonic, larval, and adult
stages of development.
WormBase CDS description: helix-loop-helix
transcription factor
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Roy
et al 2002 S2 positivecontrol L1 muscle, ViswanathanM
et al 2005 S2 sir-2.1 regulated
B0310.5 Aff_B0310.5 P W All gene names: ugt-46; B0310.5; CE03878;
WBGene00015141; WP:CE03878; XB146
WormBase description: 7TM chemoreceptor, ugt family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
B0334.4 Aff_B0334.4 P W All gene names: B0334.4; 2L787; CE02936;
WBGene00007144; WP:CE02936
WormBase description: Yeast hypothetical protein
L8167.12 like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0334.5 Aff_B0334.5 P W All gene names: B0334.5; 2L789; CE30122;
WBGene00007145; WP:CE30122
WormBase description: phytoene synthase precursor
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0334.8 Aff_B0334.8 P W All gene names: age-1; daf-23; B0334.8; 2L810; CE23506;
NM_064061; WBGene00000090; WP:CE23506
WormBase description: age-1 encodes the C. elegans
ortholog of the phosphoinositide 3-kinase (PI3K) p110
catalytic subunit; AGE-1, supplied maternally and
embryonically, is a central component of the C. elegans
insulin-like signaling pathway, lying downstream of the
DAF-2/insulin receptor and upstream of both the PDK-1
and AKT-1/AKT-2 kinases and the DAF-16 forkhead type
transcription factor, whose negative regulation is the
key output of the insulin signaling pathway; in
accordance with its role in insulin signaling, AGE-1
activity is required for regulation of metabolism, life
span, dauer formation, stress resistance, fertility,
and embryonic development; although the age-1
expression pattern has not yet been reported, ectopic
expression studies indicate that pan-neuronal age-1
expression is sufficient to rescue life-span defects,
while neuronal, intestinal, or muscle expression can
partially rescue dauer formation, and neuronal or
muscle expression can rescue metabolic defects.
WormBase CDS description: phosphatidylinositol 3-kinase
Member of lists (Publications lists):
Jones et al 2001 T2 lifespan and
Dauer, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, ViswanathanM et al 2005 S2
sir-2.1 regulated
B0336.1 Aff_B0336.1 P W All gene names: wrm-1; B0336.1; B0336.1.1; B0336.1.2;
3G815; CE26743; NM_065835; WBGene00006943; WP:CE26743
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0336.10 Aff_B0336.10 P W All gene names: rpl-23; B0336.10; B0336.10.1;
B0336.10.2; 3G794; CE00778; NM_065830; WBGene00004435;
WP:CE00778
WormBase description: rpl-23 encodes a large ribosomal
subunit L23 protein.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0336.2 Aff_B0336.2 P W All gene names: arf-1.2; arf-1; B0336.2; B0336.2.1;
B0336.2.2; 3G805; ARF/1; CE00696; NM_065834;
WBGene00000182; WP:CE00696
WormBase description: arf-1 encodes an ADP-ribosylation
factor homolog required in vivo for embryonic
development, fertility, locomotion, vulval development,
and cuticular synthesis; ARF proteins are
N-myristoylated GTPases that regulate membrane traffic
and the actin cytoskeleton, and that activate both
phospholipase D1 (PLD1) and phosphatidylinositol
4-phosphate 5-kinase.
WormBase CDS description: ARF
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S5 genes common to feeding ANOVA, Wang
et al 2003 S3 genes pass one-way ANOVA
B0336.3 Aff_B0336.3 P W All gene names: B0336.3; 3G803; CE29542;
WBGene00015143; WP:CE29542
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0336.4 Aff_B0336.4 P W All gene names: rgs-5; B0336.4; 3G791; CE32098;
NM_065828; WBGene00004348; WBGene00015144; WP:CE32098
WormBase description: rgs-5 encodes a regulator of G
protein signaling; by homology, RGS-5 is predicted to
function as a GTPase-activating protein that binds G
protein alpha subunits and negatively regulates
heterotrimeric G protein signaling; loss of rgs-5
activity via RNAi or a deletion mutation results in no
obvious defects, and likewise, rgs-5 overexpression has
no measurable effect on egg-laying behavior,
locomotion, or viability; an rgs-5 transcriptional
reporter is expressed in head neurons in larvae and
adults.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Climbing, Wang et al 2003 S4 genes pass
two-wayANOVA P0
B0336.6 Aff_B0336.6 P W All gene names: B0336.6; B0336.6.1; B0336.6.2; 3G780;
CE29545; WBGene00015146; WP:CE29545
WormBase description: B0336.6 encodes an Abl interactor
ortholog, with an SH3 domain, required for embryonic
development; mammalian Abl interactors are associated
with synaptosomes, growth cone particles, and
macropinocytic vesicles, and may regulate Rac-dependent
cytoskeletal reorganization and Abl kinase activity;
B0336.6's orthologs include human SSH3BP1 (ABI1;
OMIM:603050, mutated in acute myeloid leukemia), ABI-2
(OMIM:606442), and NESH (OMIM:606363); B0336.6 binds
UNC-53 in two-hybrid screens.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0361.2 Aff_F56C9.4 P W All gene names: B0361.2; 3I397; CE33549; CE38480;
WBGene00015156; WP:CE33549; WP:CE38480
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0361.3 Aff_B0361.3 P W All gene names: B0361.3; B0361.3.1; B0361.3.2; 3I373;
CE34242; WBGene00015157; WP:CE34242
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0361.6 Aff_B0361.6 P W All gene names: B0361.6; 3I366; CE00835;
WBGene00015160; WP:CE00835
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, oogenesis enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes
common to feeding ANOVA, Wang et al 2003 S3 genes
pass one-way ANOVA
B0379.3 Aff_B0379.3 P W All gene names: mut-16; pqn-3; B0379.3; 1K661; CE30474;
CE30475; NM_060259; NM_060260; WBGene00003508;
WP:CE30474; WP:CE30475
WormBase description: mut-16 encodes a
glutamine/asparagine (Q/N)-rich domain-containing
protein that lacks obvious homologs outside of other
nematode species; MUT-16 activity is required for
RNA-mediated interference (RNAi), transgene silencing
in germ-line and somatic tissues, and for maintaining
low levels of transposon mobilization; MUT-16 is thus
predicted to play a role in chromatin organizataion
and/or regulation of gene expression.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0393.1 Aff_B0393.1 P W All gene names: rps-0; B0393.1; B0393.1.1; B0393.1.2;
3F842; CE00854; NM_065577; WBGene00004469; WP:CE00854
WormBase description: rps-0 encodes a small ribosomal
subunit SA protein that appears to function as both a
ribosomal component and a laminin receptor; by
homology, RPS-0 is predicted to play roles in protein
biosynthesis and cell adhesion; in C. elegans, RPS-0
activity is required for embryonic and germline
development, vulval morphogenesis, and the overall
health of the animal.
WormBase CDS description: 40S ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0395.3 Aff_B0395.3 P W All gene names: B0395.3; B0395.3.1; B0395.3.2; CE02944;
WBGene00007175; WP:CE02944; XQ650
WormBase description: B0395.3 is orthologous to the
human gene CHOLINE ACETYLTRANSFERASE ISOFORM R (CHAT;
OMIM:118490), which when mutated leads to disease.
WormBase CDS description: choline O-acetyltransferase
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
ViswanathanM et al 2005 S2 sir-2.1 regulated
B0403.4 Aff_B0403.4 P W All gene names: tag-320; B0403.4; CE03880;
WBGene00015168; WP:CE03880; XH686
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: protein disulfide-isomerase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C, Reinke et al 2004, wt herm vs wt herm
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
B0410.2 Aff_B0410.2 P W All gene names: vang-1; B0410.2; CE06708; CE27572;
NM_076099; NM_076100; WBGene00015171; WP:CE06708;
WP:CE27572; XD507
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0412.3 Aff_B0412.3 P W All gene names: B0412.3; B0412.3.1; B0412.3.2; 3B425;
CE03884; WBGene00015173; WP:CE03884
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0412.4 Aff_B0412.4 P W All gene names: rps-29; B0412.4; B0412.4.1; B0412.4.2;
3B413; CE26849; NM_064862; WBGene00004498; WP:CE26849
WormBase description: rps-29 encodes a small ribosomal
subunit S29 protein; by homology, RPS-29 is predicted
to function in protein biosynthesis; in C. elegans,
RPS-29 activity is broadly required for embryonic and
germline development, normal body coloration and
morphology, normal postembryonic growth rates, and the
overall health of the animal.
WormBase CDS description: 40S ribosomal protein S29
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
B0414.5 Aff_B0414.5 P W All gene names: cpb-3; B0414.5; 1G366; CE07735;
NM_059279; WBGene00000772; WP:CE07735
WormBase description: The cbp-3 gene encodes a
cytoplasmic polyadenylation element binding (CPEB)
protein homolog.
WormBase CDS description: RNA binding protein
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0414.7 Aff_B0414.7 P W All gene names: mtk-1; B0414.7; 1G372; CE07737;
CE27573; NM_059281; NM_059282; WBGene00003472;
WP:CE07737; WP:CE27573
WormBase description: protein kinase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
B0414.8 Aff_B0414.8 P W All gene names: B0414.8; 1G380; CE30413; CE36910;
WBGene00015176; WP:CE30413; WP:CE36910
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0416.4 Aff_B0416.4 P W All gene names: B0416.4; CE02434; WBGene00015180;
WP:CE02434; XJ899
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0416.5 Aff_B0416.5 P W All gene names: B0416.5; B0416.5a.1; B0416.5a.2;
CE02435; CE29548; WBGene00015181; WP:CE02435;
WP:CE29548; XJ888
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
B0416.6 Aff_B0416.6 P W All gene names: gly-13; B0416.6; CE26434; NM_077165;
WBGene00001638; WP:CE26434; XJ912
WormBase description: alpha-1,3-mannosyl-glycoprotein
beta-1,2-n-acetyglucosaminyltransferase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0432.10 Aff_B0432.10 P W All gene names: B0432.10; 2A574; CE07748;
WBGene00015191; WP:CE07748
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0432.2 Aff_B0432.2 P W All gene names: B0432.2; 2A581; CE07740;
WBGene00015184; WP:CE07740
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0432.3 Aff_B0432.3 P W All gene names: B0432.3; 2A579; CE07741;
WBGene00015185; WP:CE07741
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0432.4 Aff_B0432.4 P W All gene names: B0432.4; 2A577; CE32102;
WBGene00015186; WP:CE32102
WormBase description: mitochrondrial
2-oxoglutarate/malate carrier protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
B0454.9 Aff_B0454.9 P W All gene names: B0454.9; 2D344; CE07759;
WBGene00015200; WP:CE07759
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma
B0457.1 Aff_B0457.1 P W All gene names: lat-1; B0457.1; 2J197; CE02945;
CE32789; CE36086; NM_063493; NM_182149; WBGene00002251;
WP:CE02945; WP:CE32789; WP:CE36086
WormBase description: lat-1 encodes a predicted
latrophilin that affects embryonic elongation,
pharyngeal development, and reproductive organ
formation; apically localized in developing epithelia
and localized to presynaptic surfaces in neurons.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0464.2 Aff_B0464.2 P W All gene names: B0464.2; 3K585; CE20456;
WBGene00007184; WP:CE20456
WormBase description: TPR Domain
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0464.8 Aff_B0464.7 P W All gene names: tag-342; B0464.8; 3K559; CE36465;
WBGene00007187; WP:CE36465
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0491.7 Aff_B0491.7 P W All gene names: B0491.7; 2L641; CE02109;
WBGene00007194; WP:CE02109
WormBase description: B0491.7 encodes a putative
diphthine synthase orthologous to S. cerevisiae DPH5;
DPH5 is an S-adenosylmethionine:EF-2 methyltransferase
required for the enzymatic conversion of
3-amino-3-carboxypropyl-histidine to diphthine; DPH5
adds at least the last two of the three methyl groups
present in diphthine, and is homologous to bacterial
AdoMet:uroporphyrinogen III methyltransferases.
WormBase CDS description: diphthine synthase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
B0495.2 Aff_B0495.2 P W All gene names: B0495.2; 2H991; CE01761;
WBGene00015203; WP:CE01761
WormBase description: CDC2
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
B0495.5 Aff_B0495.5 P W All gene names: B0495.5; B0495.5.1; B0495.5.2; 2H986;
CE29948; WBGene00015204; WP:CE29948
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S7 SAGE genes in the dataset, Wang et al 2003
S8 SAGE genes in the dauer exit
B0495.6 Aff_B0495.6 P W All gene names: B0495.6; 2H988; CE01764;
WBGene00015205; WP:CE01764
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0495.7 Aff_B0495.7 P W All gene names: B0495.7; B0495.7.1; B0495.7.2; 2H992;
CE29550; WBGene00015206; WP:CE29550
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S5 genes common to feeding ANOVA, Wang
et al 2003 S3 genes pass one-way ANOVA
B0507.3 Aff_B0507.3 P W All gene names: B0507.3; 5J251; CE07762; CE39664;
WBGene00015220; WP:CE07762; WP:CE39664
B0511.1 Aff_B0511.1 P W All gene names: fkb-7; B0511.1; 1L245; CE26851;
NM_060391; WBGene00001432; WP:CE26851
WormBase description: fkb-7 encodes a peptidylprolyl
cis/trans isomerase homologous to mammalian
FK506-binding proteins; by homology, FKB-7 could
function in a number of different processes including
protein folding, signal transduction, and regulation of
muscle contraction; however, as loss of fkb-7 function
via RNA-mediated interference (RNAi) does not result in
any obvious abnormalities, the precise role of FKB-7 in
C. elegans development and/or behavior is not yet
known.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0511.10 Aff_B0511.10 P W All gene names: eif-3.E; B0511.10; 1L218; CE17349;
NM_060384; WBGene00001228; WP:CE17349
WormBase description: eif-3.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
B0511.12 Aff_B0511.12 P W All gene names: B0511.12; 1L232; CE28877;
WBGene00015237; WP:CE28877
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, mixed oogenesis soma, ViswanathanM
et al 2005 S2 sir-2.1 regulated
B0511.6 Aff_B0511.6 P W All gene names: B0511.6; B0511.6.1; B0511.6.2; 1L203;
CE26853; WBGene00015232; WP:CE26853
WormBase description: helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0511.9 Aff_B0511.9 P W All gene names: B0511.9; 1L216; CE17348; CE26854;
WBGene00015235; WP:CE17348; WP:CE26854
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Early genes, Wang et al 2003 S3 genes
pass one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
B0513.2 Aff_B0513.2 P W All gene names: B0513.2; 4O649; CE23510;
WBGene00007195; WP:CE23510
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen
B0513.3 Aff_B0513.3 P W All gene names: rpl-29; B0513.3; B0513.3.1; B0513.3.2;
4O647; CE15559; NM_070270; WBGene00004443; WP:CE15559
WormBase description: rpl-29 encodes a large ribosomal
subunit L29 protein; by homology, RPL-29 is predicted
to function in protein biosynthesis; in C. elegans,
loss of rpl-29 function via RNA-mediated interference
(RNAi) does not result in any obvious abnormalities.
WormBase CDS description: 60S ribosomal protein L29
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
B0547.1 Aff_B0547.1 P W All gene names: csn-5; B0547.1; B0547.1.1; B0547.1.2;
4G415; CE06722; NM_068440; WBGene00000817; WP:CE06722
WormBase description: csn-5 encodes an ortholog of
subunit 5 of the COP9 signalosome complex (CSN5), which
in turn is a pan-eukaryotic multiprotein complex that
positively regulates E3 ubiquitin ligases, physically
interacts with SCF-type E3 ubiquitin ligases, and
probably regulates protein degradation; CSN-5 (along
with KGB-1 and ZYX-1) physically binds germline RNA
helicases (GLH proteins), and csn-5(RNAi) results in
sterile worms with small gonads and no oocytes, causing
oogenesis to cease, but not affecting the initial
assembly of P granules -- a defect essentially
identical to that produced by RNAi with a combination
of glh-1 and glh-4.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0563.4 Aff_B0563.3 P W All gene names: tag-132; B0563.4; CE30843;
WBGene00006479; WP:CE30843; XJ777
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0564.1 Aff_B0564.1 P W All gene names: tin-9.2; B0564.1; 4N865; CE20469;
CE37950; NM_070119; WBGene00007201; WBGene00044083;
WP:CE20469; WP:CE37950
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, oogenesis enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C01A2.4 Aff_C01A2.4 P W All gene names: C01A2.4; 1N983; CE34247;
WBGene00007216; WP:CE34247
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster A, Reinke et al 2004, list of genes in
cluster order, ViswanathanM et al 2005 S2 sir-2.1
regulated
C01B10.5 Aff_C01B10.5 P W All gene names: hil-7; C01B10.5; C01B10.5b.1;
C01B10.5b.2; H1.Q; 4H411; CE06736; CE26856; CE26857;
CE33357; NM_068626; WBGene00001858; WP:CE06736;
WP:CE26856; WP:CE26857; WP:CE33357
WormBase description: hil-7 encodes a histone H1.1
isoform that is required in the germline for chromatin
silencing (assayed by silencing of transgenic DNA), for
proliferation and differentiation, and for fertility;
hil-7(RNAi) phenotypes resemble the Mes phenotype
resulting from the desilencing of genes required for
somatic differentiation in the germline; HIL-7 is
required in both the hermaphrodite and the male
germlines, and is ubiquitously expressed in all nuclei
(somatic and germline).
C01B12.8 Aff_C01B12.8 P W All gene names: C01B12.8; CE07796; NM_061235;
WBGene00015291; WP:CE07796
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, GO categories
C01B7.1 Aff_C01B7.1 P W All gene names: C01B7.1; C01B7.1a.1; C01B7.1a.2; 5J271;
CE29553; CE30719; WBGene00015274; WP:CE29553;
WP:CE30719
WormBase description: zinc finger protein
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan
C01C10.3 Aff_C01C10.3 P W All gene names: acl-12; C01C10.3; CE02449; NM_076859;
WBGene00015295; WP:CE02449; XI58
C01F1.1 Aff_C01F1.1 P W All gene names: C01F1.1; 2E595; CE06742;
WBGene00015296; WP:CE06742
WormBase description: dna binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C01F1.2 Aff_C01F1.2 P W All gene names: C01F1.2; 2E591; CE06743;
WBGene00015297; WP:CE06743
WormBase description: C01F1.2 is orthologous to the
human gene SCO (CYTOCHROME OXIDASE DEFICIENT, YEAST)
HOMOLOG 1 (SCO1; OMIM:603644), which when mutated leads
to early-onset hepatic failure; the C01F1.2 protein is
predicted to be mitochondrial with 68% accuracy.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
C01F6.5 Aff_C01F6.5 P W All gene names: aly-1; ref-1; C01F6.5; 4J873; CE02954;
NM_069187; WBGene00000120; WP:CE02954
WormBase description: RNA recognition motif. (aka RRM,
RBD, or RNP domain)
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, Romagnolo et al 2002
Fig3b Metabolism, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C01F6.8 Aff_C01F6.8 P W All gene names: icl-1; C01F6.8; 4J860; CE17360;
CE30069; ICln; WBGene00002046; WP:CE17360; WP:CE30069
WormBase description: The icl-1 gene encodes, through
alternative splicing, two alternative forms (ICL-1A, or
'IClnN1', and ICL-1B, or 'IClnN2'), with distinct
electrophysiological properties, of an anion channel
homolog.
WormBase CDS description: nucleotide-sensitive chloride
ion channel
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Romagnolo et
al 2002 Fig3b Transporters, ViswanathanM et al 2005
S2 sir-2.1 regulated
C01F6.9 Aff_C01F6.9 P W All gene names: C01F6.9; 4J862; CE17361; NX;
WBGene00007223; WP:CE17361
WormBase description: The C01F6.9 gene resides in an
operon that also contains the genes icl-1 and lpl-1.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C01G10.8 Aff_C01G10.8 P W All gene names: C01G10.8; C01G10.8.1; C01G10.8.2;
5P564; CE07817; WBGene00007235; WP:CE07817
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
C01G12.3 Aff_C01G12.3 P W All gene names: C01G12.3; 2O868; CE15573;
WBGene00007244; WP:CE15573
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, wt males vs glp4 male enriched ,
Reinke et al 2004, spermatogenesis enriched genes,
Reinke et al 2004, fem3 enriched genes, Reinke et al
2004, shared sperm
C01G5.6 Aff_C01G5.6 P W All gene names: C01G5.6; 4H289; CE23513;
WBGene00015308; WP:CE23513
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, GO
categories, Reinke et al 2004, list of genes in cluster
E, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang
et al 2003 S3 genes pass one-way ANOVA, Wang et al
2003 S4 genes pass two-wayANOVA P0, Wang et al 2003
S4 Dauer Enriched
C01G6.2 Aff_C01G6.2 P W All gene names: C01G6.2; 2J557; CE02958;
WBGene00007224; WP:CE02958
Member of lists (Publications lists):
Reinke et al 2004, herm sperm, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, spermatogenesis enriched genes, Reinke et al
2004, wt herm vs wt herm enriched gen, Reinke et al
2004, fem3 enriched genes, Reinke et al 2004, IVb male
soma enriched genes, Reinke et al 2004, wt vs glp-4
enriched genes, Reinke et al 2004, list of genes in
cluster D, ViswanathanM et al 2005 S2 sir-2.1
regulated
C01G6.3 Aff_C01G6.3 P W All gene names: C01G6.3; 2J561; CE37474;
WBGene00007225; WP:CE37474
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C01G6.4 Aff_C01G6.4 P W All gene names: C01G6.4; 2J562; CE00866;
WBGene00007226; WP:CE00866
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C01G6.5 Aff_C01G6.5 P W All gene names: C01G6.5; 2J566; CE00867;
WBGene00007227; WP:CE00867
WormBase description: Forkhead-associated (FHA) domain
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, mixed oogenesis soma, Reinke et al 2004, list of
genes in cluster E
C01G6.7 Aff_C01G6.7 P W All gene names: C01G6.7; 2J583; CE00869;
WBGene00007228; WP:CE00869
WormBase description: 4-coumarate-coA ligase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, fem3 enriched genes,
Reinke et al 2004, mixed sperm soma, Reinke et al 2004,
list of genes in cluster D, Reinke et al 2004, GO
categories, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0,
Wang et al 2003 S4 Dauer Enriched
C01G6.8 Aff_C01G6.8 P W All gene names: cam-1; kin-8; C01G6.8; 2J586; CE24774;
CE32563; CE39126; WBGene00000289; WP:CE24774;
WP:CE32563; WP:CE39126
WormBase description: The cam-1 gene encodes a receptor
tyrosine kinase of the immunoglobulin superfamily that
is orthologous to human ROR1 (OMIM:602336) and ROR2
(OMIM:602337, mutation of which leads to type B
brachydactyly) and is required for locomotion, cell
migration, asymmetric cell division, axon outgrowth,
and dauer formation; CAM-1 is broadly expressed during
embryogenesis and larval development with expression
first appearing at the 200-cell stage of embryogenesis.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C01G8.2 Aff_C01G8.2 P W All gene names: cln-3.2; C01G8.2; C01G8.2.1; C01G8.2.2;
1F844; CE07802; NM_059155; WBGene00000540; WP:CE07802
WormBase description: cln-3.2 encodes a predicted
transmembrane protein that comprises one of three C.
elegans homologs of human CLN3 (OMIM:607042, mutations
are associated with Batten disease (also known as
juvenile neuronal ceroid lipofuscinosis), a recessively
inherited childhood neurodegenerative lysosomal storage
disease); loss of cln-3.2 activity via large-scale RNAi
screens has been reported to result in either no
defects or in embryonic lethality.
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C01H6.7 Aff_C01H6.7 P W All gene names: tag-298; C01H6.7; 1H803; CE05190;
WBGene00007256; WP:CE05190
WormBase description: Bromodomain
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C01H6.9 Aff_C01H6.9 P W All gene names: C01H6.9; 1H806; CE07824;
WBGene00007258; WP:CE07824
WormBase description: C01H6.9 encodes a homolog of
haploid germ cell-specific nuclear protein kinase
(haspin) that specifically binds GOA-1 in yeast
two-hybrid assays; C01H6.9 is expressed in PHB sensory
neurons and PVT interneurons in the tail, several
unidentified neurons in the head (with projections to
the nose and nerve ring), and intestinal cells, with
mainly nuclear localization; C01H6.9 has no obvious
function or phenotype in RNAi assays, either alone or
with inactivation of a close paralog (F22H10.5).
WormBase CDS description: Eukaryotic protein kinase
domain
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, GO
categories, Romagnolo et al 2002 Fig3b Unkown
C02B10.4 Aff_C02B10.4 P W All gene names: C02B10.4; C02B10.4.1; C02B10.4.2;
4F857; CE16801; WBGene00015329; WP:CE16801
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated
C02E11.1 Aff_C02E11.1 P W All gene names: C02E11.1; C02E11.1a.1; C02E11.1a.2;
5B508; CE28528; CE32040; WBGene00015344; WP:CE28528;
WP:CE32040
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S8
SAGE genes in the dauer exit, Wang et al 2003 S7 SAGE
genes in the dataset
C02F12.4 Aff_C02F12.4 P W All gene names: tag-52; C02F12.4; CE03899;
WBGene00006431; WP:CE03899; XE294
WormBase description: guanine-nucleotide releasing
factor of the CDC24 family
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C02F12.8 Aff_C02F12.8 P W All gene names: C02F12.8; CE03902; WBGene00015357;
WP:CE03902; XE310
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, ViswanathanM et al 2005 S2 sir-2.1
regulated
C02F5.1 Aff_C02F5.1 P W All gene names: knl-1; C02F5.1; 3J343; CE02450;
NM_066410; WBGene00002231; WP:CE02450
WormBase description: knl-1 encodes a novel acidic
protein with a coiled-coil region at its C-terminus;
KNL-1 is an essential kinetochore component that is
required for proper spindle elongation and chromosome
separation, and in the kinetochore assembly pathway,
plays a key role in linking the initiation of
kinetochore formation with the construction of a
functional microtubule-binding interface; in the
assembly pathway, KNL-1 functions downstream of the
DNA-proximal kinetochore components CeCENP-A/HCP-3 and
CeCENP-B/HCP-4 and upstream of the outer kinetochore
components HIM-10/Nuf2p, NDC-80/HEC1, CeBUB-1, HCP-1,
and CeCLASP2/CLS-2; in expression studies in the
one-cell embryo, KNL-1 localizes to kinetochores
throughout mitosis.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C02F5.12 Aff_C02F5.9 P W All gene names: C02F5.12; 3J330; CE39127;
WBGene00015352; WP:CE39127
C02F5.6 Aff_C02F5.6 P W All gene names: C02F5.6; CE00042; CE30417; NM_171212;
NM_171213; WBGene00015349; WP:CE00042; WP:CE30417
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C03A7.4 Aff_C03A7.4 P W All gene names: pqn-5; C03A7.4; 5F633; CE07862;
NM_071981; WBGene00004099; WP:CE07862
WormBase description: The protein product of this gene
is predicted to contain a glutamine/asparagine
(Q/N)-rich ('prion') domain, by the algorithm of
Michelitsch and Weissman (as of the WS77 release of
WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 T1 pqn genes
C03B1.12 Aff_C03B1.12 P W All gene names: lmp-1; C03B1.12; C03B1.12.1;
C03B1.12.2; CE03912; NM_076671; WBGene00003053;
WP:CE03912; XG996
WormBase description: lmp-1 encodes a protein with
similarity to vertebrate lysosome-associated membrane
proteins CD68, and appears to be the only protein in C.
elegans that has a GYXX (phi) vertebrate lysosomal
targeting sequence at its carboxy terminus; localized
to the periphery of a large population of membrane
bound organelles (granules) seen throughout the early
embryos and restricted to the cells of the intestine
during later stages.
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C03B1.7 Aff_C03B1.7 P W All gene names: C03B1.7; CE03909; WBGene00015378;
WP:CE03909; XG963
C03B8.4 Aff_C03B8.4 P W All gene names: lin-13; lin-51; C03B8.4; 3I790;
CE30419; NM_066277; WBGene00003002; WP:CE30419
WormBase description: Gene Function : lin-13 encodes a
large (2248-residue) nuclear protein with multiple zinc
fingers of the C2H2 class and a LXCXE retinoblastoma
protein-binding motif, that is required for survival
through larval development and for negative regulation
of vulval fates during postembryonic development.
WormBase CDS description: Zinc finger
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, list of genes in cluster
order
C03C10.1 Aff_C03C10.1 P W All gene names: kin-19; C03C10.1; C03C10.1.1;
C03C10.1.2; C03C10.1.3; 3F174; CE00872; NM_065417;
WBGene00002202; WP:CE00872
WormBase description: kin-19 encodes a serine/threonine
kinase orthologous to human casein kinase I, alpha 1
(CSNK1A1, OMIM:600505); KIN-19 appears to be a
component of the non-canonical Wnt signaling pathway
that regulates endoderm formation in the early embryo;
kin-19(RNAi) and mom-2(RNAi) enhance apr-1(RNAi), but
not RNAi of each other.
WormBase CDS description: casein Kinase I
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C03D6.3 Aff_C03D6.3 P W All gene names: cel-1; C03D6.3; 1K243; CE05197;
CE32300; NM_060168; WBGene00000466; WP:CE05197;
WP:CE32300
WormBase description: cel-1 encodes a mRNA capping
enzyme, with a N-terminal region with RNA
triphosphatase activity and a C-terminal region
containing motifs found in yeast and vaccinia virus
capping enzyme guanylytransferases; cel-1 is required
for embryonic viability, body morphology, and vulval
development.
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, list of genes in cluster F, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, intrinsic, Reinke et al 2004, wt vs glp-4
enriched genes, Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S8 SAGE genes in the dauer
exit, Wang et al 2003 S7 SAGE genes in the dataset
C03D6.4 Aff_C03D6.4 P W All gene names: npp-14; C03D6.4; 1K238; CE05198;
CeNup214; NM_060167; WBGene00003800; WP:CE05198
WormBase description: npp-14 is orthologous to the
human gene NUCLEOPORIN, 214-KD (NUP214; OMIM:114350),
which encodes part of the nucleopore complex mediating
nucleocytoplasmic transport; NUP214, as a fusion gene
with DEK (OMIM:125264), is found in a subset of acute
myeloid leukemia.
WormBase CDS description: nucleoporin
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, ViswanathanM et al
2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005
S2 sir-2.1 regulated
C03D6.8 Aff_C03D6.8 P W All gene names: rpl-24.2; C03D6.8; C03D6.8.1;
C03D6.8.2; 1K245; CE05202; NM_060171; WBGene00004437;
WP:CE05202
WormBase description: rpl-24.2 encodes a large
ribosomal subunit L24 protein paralog; its orthologs
include ribosomal protein L30 isologs from mammals and
'Ribosomal Like Protein 24' (Rlp24p) from S.
cerevisiae; it therefore appears to actually represent
an ancient paralogy between two varieties of eukaryotic
L24 protein.
WormBase CDS description: ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C03H12.1 Aff_ZK662.1 P W All gene names: C03H12.1; CE35380; WBGene00007284;
WP:CE35380; XQ313
C03H5.2 Aff_C03H5.2 P W All gene names: C03H5.2; 2A681; CE32110;
WBGene00015404; WP:CE32110
C03H5.7 Aff_C03H5.7 P W All gene names: C03H5.7; 2A673; CE07900;
WBGene00015409; WP:CE07900
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C04A2.1 Aff_C04A2.1 P W All gene names: C04A2.1; 2H139; CE36523;
WBGene00015410; WP:CE36523
Member of lists (Publications lists):
Shen et al 2005 T1 hif-1 depend
hypoxia, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C04E7.2 Aff_C04E7.2 P W All gene names: C04E7.2; CE28816; WBGene00015429;
WP:CE28816; XA975
C04F12.10 Aff_C04F12.10 P W All gene names: Ce-face-1; fce-1; C04F12.10; 1K288;
CE19683; NM_060181; WBGene00001405; WP:CE19683
WormBase description: fce-1 encodes an ortholog of
'farnesylated-proteins converting enzyme 1' (FACE-1),
and thus probably enables post-translational processing
of proteins (such as LET-60/RAS) carrying a C-terminal
CaaX motif; FCE-1 protein probably accounts for the
EDTA-sensitive,
tosylphenylalanylchloromethane-insensitive component of
CaaX-proteolytic activity in membrane extracts from C.
elegans, and FCE-1 can cleave a farnesylated peptide in
vitro; the S. cerevisiae homolog of FCE-1 (Ste24p)
cleaves the precursor of yeast a-factor mating
pheromone after its farnesylated cysteine residue, and
transgenic FCE-1 rescues a mating defect of mutant
yeast lacking both the Ste24p and the Rce1p
CaaX-proteases.
WormBase CDS description: Zinc-binding metalloprotease
domain
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S4 Climbing, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
C04F12.4 Aff_C04F12.4 P W All gene names: rpl-14; C04F12.4; C04F12.4.1;
C04F12.4.2; 1K265; CE19677; NM_060175; WBGene00004426;
WP:CE19677
WormBase description: rpl-14 encodes a large ribosomal
subunit L14 protein.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
Romagnolo et al 2002 Fig3b Protein Synthesis,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C04F12.9 Aff_C04F12.9 P W All gene names: C04F12.9; 1K286; CE19682;
WBGene00007303; WP:CE19682
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
Member of lists (Publications lists):
Golden et al 2004, N2 vs daf-2
different genes at , Lund et al 2002 Fig3D Oocyte-en,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, mixed oogenesis soma, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C04F5.8 Aff_C04F5.8 P W All gene names: C04F5.8; 5F590; CE19672;
WBGene00015450; WP:CE19672
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C04F5.9 Aff_C04F5.9 P W All gene names: C04F5.9; 5F594; CE19673;
WBGene00015451; WP:CE19673
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C04F6.3 Aff_C04F6.3 P W All gene names: cht-1; C04F6.3; C04F6.3.1; C04F6.3.2;
CE03923; CHT1; NM_076187; WBGene00000503; WP:CE03923;
XE16
WormBase description: cht-1 encodes a chitinase
orthologous to human chitinase-1 (OMIM:600031,
mutations are associated with chitotriosidase
deficiency); CHT-1 is predicted to function as an
extracellular O-glycosyl hydrolase that hydrolyzes the
glycosidic bond between two or more carbohydrates; in
C. elegans, CHT-1 may play a role in embryogenesis, and
may also be required for cuticle degradation during
molting and degradation of chitin-containing pathogens
as part of a host defense mechanism.
WormBase CDS description: glycosyl hydrolase (family
18)
Member of lists (Publications lists):
Bishop et al 2004 T1 Upregulated in
vhl-1 vs WT, Jones et al 2001 Non dauer genes P<0.05,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C04F6.4 Aff_C04F6.4 P W All gene names: unc-78; C04F6.4; C04F6.4b.1;
C04F6.4b.2; CE03924; CE33554; NM_076189;
WBGene00006810; WP:CE03924; WP:CE33554; XE28
WormBase description: The unc-78 gene encodes a homolog
of actin-interacting protein 1 (AIP1) that regulates
the ordered assembly of actin and cofilin in
myofibrils.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C04F6.5 Aff_C04F6.5 P W All gene names: dhs-27; C04F6.5; CE37079; NM_076190;
WBGene00000990; WP:CE37079; XE32
WormBase description: dhs-27 encodes a short-chain
dehydrogenase predicted to be mitochondrial.
WormBase CDS description: alcohol/ribitol dehydrogenase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C04G2.6 Aff_C04G2.6 P W All gene names: dis-3; tag-128; C04G2.6; 4K869;
CE05214; NM_069434; WBGene00001001; WP:CE05214
WormBase description: S.pombe mitotic control protein
like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C05C10.2 Aff_C05C10.2 P W All gene names: C05C10.2; C05C10.2b.1; C05C10.2b.2;
2K219; CE01466; CE27795; WBGene00007329; WP:CE01466;
WP:CE27795
WormBase description: NAM7 protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C05C8.2 Aff_C05C8.2 P W All gene names: C05C8.2; 5H713; CE07920;
WBGene00015461; WP:CE07920
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C05C8.4 Aff_C05C8.4 P W All gene names: gei-6; C05C8.4; 5H708; CE07922;
NM_072435; WBGene00001563; WP:CE07922
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C05C8.5 Aff_C05C8.5 P W All gene names: C05C8.5; 5H714; CE07923;
WBGene00015462; WP:CE07923
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, GO
categories, Reinke et al 2004, list of genes in cluster
E, ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C05C8.6 Aff_C05C8.6 P W All gene names: C05C8.6; 5H716; CE07924;
WBGene00015463; WP:CE07924
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
C05D10.1 Aff_C05D10.1 P W All gene names: C05D10.1; C05D10.1a.1; C05D10.1a.2;
C05D10.1c.1; C05D10.1c.2; C05D10.1c.3; C05D10.1c.4;
3H173; CE24783; CE30420; CE37698; WBGene00015477;
WP:CE24783; WP:CE30420; WP:CE37698
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C05D11.12 Aff_C05D11.12 P W All gene names: let-721; C05D11.12; C05D11.12.1;
C05D11.12.2; 3H534; CE29662; NM_066014; WBGene00002855;
WP:CE29662
WormBase description: The let-721 gene encodes an
ortholog of the human gene SIMILAR TO
ELECTRON-TRANSFERRING-FLAVOPROTEIN DEHYDROGENASE
(ETFDH), which when mutated leads to glutaricaciduria
type IIC (OMIM:231675).
WormBase CDS description: YAAS
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Romagnolo et al 2002 Fig3b Oxidation,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C05D11.2 Aff_C05D11.2 P W All gene names: tag-171; vps-16; C05D11.2; C05D11.2.1;
C05D11.2.2; 3H525; CE24785; WBGene00006516; WP:CE24785
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, mixed oogenesis soma, Reinke et al 2004, wt herm
vs wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated, Zhang et al 2002, T1 mec-3 dependent
genes
C05D11.9 Aff_C05D11.9 P W All gene names: C05D11.9; 3H518; CE24787;
WBGene00015486; WP:CE24787
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Romagnolo et
al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2
sir-2.1 regulated
C05D2.10 Aff_C05D2.6 P W All gene names: C05D2.10; C05D2.10a.1; C05D2.10a.2;
3G688; CE26861; CE29560; WBGene00015470; WP:CE26861;
WP:CE29560
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C05D9.5 Aff_C05D9.5 P W All gene names: ife-4; C05D9.5; CE07931; NM_075809;
WBGene00002062; WP:CE07931; XB723
WormBase description: The ife-4 gene encodes a member
of the Initiation Factor 4E (eIF4E) family.
WormBase CDS description: initiation factor 4E (EIF-4E)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C05D9.7 Aff_C05D9.7 P W All gene names: C05D9.7; CE07933; WBGene00015474;
WP:CE07933; XB736
C05E11.1 Aff_C05E11.1 P W All gene names: C05E11.1; CE29561; WBGene00015492;
WP:CE29561; XF209
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang
et al 2003 S4 genes pass two-wayANOVA P0
C05E11.3 Aff_C05E11.3 P W All gene names: C05E11.3; CE33029; WBGene00015494;
WP:CE33029; XF199
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C05G5.2 Aff_C05G5.2 P W All gene names: C05G5.2; CE05225; WBGene00007348;
WP:CE05225; XP367
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C05G5.4 Aff_C05G5.4 P W All gene names: C05G5.4; CE05227; WBGene00007350;
WP:CE05227; XP373
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: succinyl-CoA synthetase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
C06A1.1 Aff_C06A1.1 P W All gene names: cdc-48.1; phi-31; C06A1.1; 2K850;
CE02114; NM_063872; WBGene00007352; WP:CE02114
WormBase description: transitional endoplasmic
reticulum ATPase homolog 1 (P97 protein)
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, GO categories,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C06A1.5 Aff_C06A1.5 P W All gene names: C06A1.5; 2K871; CE02117;
WBGene00007355; WP:CE02117
WormBase description: DNA directed RNA polymerase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated
C06A5.11 Aff_C06A5.3 P W All gene names: sir-2.4; C06A5.11; 1G567; CE27656;
NM_059332; WBGene00004803; WP:CE27656
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C06A5.2 Aff_C06A5.2 P W All gene names: C06A5.2; 1G583; CE07949;
WBGene00015500; WP:CE07949
Member of lists (Publications lists):
Reinke et al 2004, wt vs glp-4
enriched genes, Reinke et al 2004, wt males vs glp4
male enriched , Reinke et al 2004, spermatogenesis
enriched genes, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, fem3 enriched genes,
Reinke et al 2004, shared sperm
C06A5.5 Aff_C06A5.5 P W All gene names: C06A5.5; 1G558; CE07952;
WBGene00015503; WP:CE07952
WormBase description: RNA-binding protein
C06A6.2 Aff_C06A6.1 P W All gene names: C06A6.2; 4I617; CE31152; CE31153;
WBGene00015507; WP:CE31152; WP:CE31153
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma
C06A6.3 Aff_C06A6.3 P W All gene names: C06A6.3; 4I599; CE03941;
WBGene00015508; WP:CE03941
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C06A6.5 Aff_C06A6.5 P W All gene names: C06A6.5; 4I598; CE27661;
WBGene00015510; WP:CE27661
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
C06A8.3 Aff_C06A8.3 P W All gene names: C06A8.3; 2I81; CE02454; WBGene00015514;
WP:CE02454
WormBase description: 17k antigen (O. volvulus)
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Early genes, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0, Zhang et al 2002, T1
mec-3 dependent genes
C06A8.5 Aff_C06A8.5 P W All gene names: C06A8.5; 2I73; CE02456; WBGene00015515;
WP:CE02456
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, Fig2b shared gemlines, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , ViswanathanM et al 2005 S2
sir-2.1 regulated
C06B3.4 Aff_C06B3.4 P W All gene names: dod-8; stdh-1; C06B3.4; 5O389; CE07961;
NM_074048; WBGene00007363; WP:CE07961
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: estradiol 17
beta-dehydrogenase
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1
elongate lifespan, ViswanathanM et al 2005 S2 sir-2.1
regulated
C06E1.1 Aff_C06E1.1 P W All gene names: C06E1.1; 3J695; CE00054;
WBGene00015518; WP:CE00054
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C06E2.5 Aff_C06E2.5 P W All gene names: C06E2.5; C06E2.5.1; C06E2.5.2; CE30595;
WBGene00015529; WP:CE30595; XJ476
C06E7.1 Aff_C06E7.1 P W All gene names: C06E7.1; 4G615; CE03957; CE32569;
CE33515; CE37186; WBGene00015538; WP:CE03957;
WP:CE32569; WP:CE33515; WP:CE37186
WormBase description: S-adenosylmethionine synthetase
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4
Early genes, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C06E7.4 Aff_C06E7.4 P W All gene names: C06E7.4; 4G616; CE29026;
WBGene00015541; WP:CE29026
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C06G1.4 Aff_C06G1.4 P W All gene names: ain-1; C06G1.4; C06G1.4.1; C06G1.4.2;
CE03967; WBGene00015547; WP:CE03967; XR231
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
C06G3.10 Aff_C06G3.10 P W All gene names: cgo-2; cogc-2; C06G3.10; 4H802;
CE28817; CELDLC; NM_068691; WBGene00000585; WP:CE28817;
cog2
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C06G3.11 Aff_C06G3.11 P W All gene names: tin-9.1; C06G3.11; C06G3.11b.1;
C06G3.11b.2; 4H808; CE07987; CE33518; WBGene00006572;
WP:CE07987; WP:CE33518; tim9a; tim9b
WormBase description: tin-9 encodes a member of the
Tim10/DDP family of zinc finger proteins, a family of
proteins typically involved in mitochondrial protein
import, and localized to the mitochondrial
intermembrane space.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C06G3.5 Aff_C06G3.5 P W All gene names: C06G3.5; C06G3.5b.1; C06G3.5b.2; 4H791;
CE07981; CE26867; WBGene00015551; WP:CE07981;
WP:CE26867
WormBase description: C06G3.5 is orthologous to human
ADENOSINE DEAMINASE (ADA; OMIM:102700), which when
mutated leads to severe combined immunodeficiency.
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
C06G3.6 Aff_C06G3.6 P W All gene names: C06G3.6; 4H783; CE07982;
WBGene00015552; WP:CE07982
WormBase description: zinc finger protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C06G3.9 Aff_C06G3.9 P W All gene names: C06G3.9; C06G3.9.1; C06G3.9.2; 4H798;
CE07985; WBGene00015555; WP:CE07985
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen
C07A12.3 Aff_C07A12.3 P W All gene names: nhr-35; C07A12.3; CE30855; CE38483;
NM_076378; WBGene00003628; WP:CE30855; WP:CE38483;
XF155
WormBase description: zinc finger protein
C07A12.4 Aff_C07A12.4 P W All gene names: pdi-2; C07A12.4; C07A12.4a.1;
C07A12.4a.2; CE03972; CE31878; NM_076377; NM_182439;
WBGene00003963; WP:CE03972; WP:CE31878; XF145
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, Link et al 2003 T2 Abeta repressed,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, list of genes in cluster C, Roy et
al 2002 S3 muscle genes, ViswanathanM et al 2005 S2
UPR genes, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003
S4 genes pass two-wayANOVA P0
C07A12.7 Aff_C07A12.7 P W All gene names: C07A12.7; C07A12.7a.1; C07A12.7a.2;
C07A12.7c.1; C07A12.7c.2; CE25764; CE27055; CE33557;
WBGene00015561; WP:CE25764; WP:CE27055; WP:CE33557;
XF138
C07A9.2 Aff_C07A9.2 P W All gene names: C07A9.2; C07A9.2.1; C07A9.2.2; 3J784;
3K784; CE00499; WBGene00007400; WP:CE00499
WormBase description: G10 protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO
categories
C07D10.5 Aff_C07D10.5 P W All gene names: C07D10.5; 2H673; CE36628;
WBGene00015569; WP:CE36628
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, herm soma enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C07E3.1 Aff_C07E3.1 P W All gene names: C07E3.1; 2K638; CE02118; CE23526;
WBGene00007412; WP:CE02118; WP:CE23526
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C07E3.6 Aff_C07E3.6 P W All gene names: C07E3.6; 2K660; CE35825;
WBGene00007417; WP:CE35825
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
C07G1.5 Aff_C07G1.5 P W All gene names: hgrs-1; pqn-9; C07G1.5; 4I966; CE32574;
NM_068974; WBGene00004101; WP:CE32574
WormBase description: The protein product of this gene
is predicted to contain a glutamine/asparagine
(Q/N)-rich ('prion') domain, by the algorithm of
Michelitsch and Weissman (as of the WS77 release of
WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C07G2.3 Aff_C07G2.3 P W All gene names: cct-5; C07G2.3; C07G2.3b.1; C07G2.3b.2;
C07G2.3b.3; C07G2.3b.4; C07G2.3b.5; C07G2.3b.6;
C07G2.3b.7; 3F590; CE02985; CE29569; NM_065514;
WBGene00000380; WP:CE02985; WP:CE29569
WormBase description: A homolog of the mouse chaperonin
Ccte that affects protein folding; it is expressed at
all life stages.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C07G3.9 Aff_C07G3.9 P W All gene names: ugt-64; C07G3.9; 5D982; CE08000;
WBGene00015577; WP:CE08000
WormBase description: 7TM chemoreceptor, ugt family
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, mixed oogenesis soma, Reinke et al 2004, GO
categories
C07H4.2 Aff_C07H4.2 P W All gene names: clh-5; C07H4.2; C07H4.2.1; C07H4.2.2;
2J386; CE27360; NM_063539; WBGene00000532; WP:CE27360
WormBase description: The clh-5 gene encodes a chloride
channel, whose human homologs include CLC1 and CLCN5;
the latter homolog is imvolved in receptor-mediated
endocytosis.
WormBase CDS description: chloride channel protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, ViswanathanM et al
2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2
daf-16 Resveratrol
C07H6.1 Aff_C07H6.1 P W All gene names: lig-4; C07H6.1; 3I613; CE34522;
NM_066252; WBGene00002986; WP:CE34522
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, wt herm vs wt male enriched
gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
C07H6.2 Aff_C07H6.2 P W All gene names: C07H6.2; 3I609; CE00756;
WBGene00015579; WP:CE00756
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C07H6.4 Aff_C07H6.4 P W All gene names: C07H6.4; 3I591; CE00755;
WBGene00015581; WP:CE00755
WormBase description: Probable RNA binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, list of genes in cluster F, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C07H6.5 Aff_C07H6.5 P W All gene names: cgh-1; C07H6.5; C07H6.5.1; C07H6.5.2;
3I586; CE00839; NM_066245; WBGene00000479; WP:CE00839
WormBase description: The ortholog of a RNA helicase
ste13/ME31B/RCK/p54 that is required for oocyte and
sperm function and the prevention of physiological
germline-associated apoptosis; it is expressed in the
early embryo and germline and localizes to P granules.
WormBase CDS description: ATP-dependent RNA helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, list of genes in cluster
F, Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, Fig2b shared gemlines, Reinke et al 2004, list of
genes in cluster order, Reinke et al 2004, oogenesis
enriched genes, Reinke et al 2004, wt vs glp-4 enriched
genes, Reinke et al 2004, wt males vs glp4 male
enriched , Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
C08A9.6 Aff_C08A9.6 P W All gene names: C08A9.6; CE06788; WBGene00015586;
WP:CE06788; XR708
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C08A9.7 Aff_C08A9.7 P W All gene names: sdz-2; C08A9.7; CE06789;
WBGene00015587; WP:CE06789; XR714
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
C08B11.2 Aff_C08B11.2 P W All gene names: hda-2; C08B11.2; 2I312; CE01472;
NM_063277; WBGene00001835; WP:CE01472
WormBase description: transcriptional regulatory
protein (RPD3)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, ViswanathanM et al
2005 S2 sir-2.1 regulated
C08B11.6 Aff_C08B11.6 P W All gene names: C08B11.6; C08B11.6.1; C08B11.6.2;
CE30856; WBGene00007434; WP:CE30856
WormBase description: actin
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C08B11.7 Aff_C08B11.7 P W All gene names: ubh-4; C08B11.7; 2I328; CE36913;
NM_063283; WBGene00006724; WP:CE36913
WormBase description: thiolesterase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
C08B11.8 Aff_C08B11.8 P W All gene names: C08B11.8; 2I333; CE01478;
WBGene00007435; WP:CE01478
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0
C08B11.9 Aff_C08B11.9 P W All gene names: C08B11.9; CE01479; WBGene00007436;
WP:CE01479
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C08B6.7 Aff_C08B6.7 P W All gene names: C08B6.7; 5K612; CE05244;
WBGene00007428; WP:CE05244
WormBase description: 59 protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, ViswanathanM
et al 2005 S2 sir-2.1 regulated
C08F8.1 Aff_C08F8.1 P W All gene names: C08F8.1; 4L915; CE05248;
WBGene00007443; WP:CE05248
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C08F8.2 Aff_C08F8.2 P W All gene names: C08F8.2; C08F8.2b.1; C08F8.2b.2; 4L917;
CE05249; CE19689; WBGene00007444; WP:CE05249;
WP:CE19689
WormBase description: ATP-dependent RNA helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, GO
categories
C08H9.2 Aff_C08H9.2 P W All gene names: C08H9.2; 2K178; CE23530;
WBGene00007463; WP:CE23530
WormBase description: high-density lipoprotein-binding
protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
C08H9.3 Aff_C08H9.3 P W All gene names: C08H9.3; 2K174; CE36914; CE37608;
WBGene00007464; WP:CE36914; WP:CE37608
WormBase description: glucosyltransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S5 genes common to feeding ANOVA, Wang
et al 2003 S3 genes pass one-way ANOVA
C09B8.5 Aff_C09B8.5 P W All gene names: C09B8.5; CE02465; WBGene00015624;
WP:CE02465; XG640
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Romagnolo
et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2
sir-2.1 regulated
C09B8.7 Aff_C09B8.7 P W All gene names: pak-1; C09B8.7; C09B8.7a.1; C09B8.7a.2;
C09B8.7c.1; C09B8.7c.2; C09B8.7e.1; C09B8.7e.2;
C09B8.7e.3; CE06792; CE27670; CE33559; CE33561; CePAK;
WBGene00003911; WP:CE06792; WP:CE27670; WP:CE33559;
WP:CE33561; XG664
WormBase description: pak-1 is orthologous to the human
gene P21-ACTIVATED KINASE 3 (PAK3; OMIM:300142), which
when mutated leads to nonsyndromic mental retardation.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, ViswanathanM et al
2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Early
genes, Wang et al 2003 S3 genes pass one-way ANOVA,
Wang et al 2003 S4 genes pass two-wayANOVA P0
C09D4.5 Aff_C09D4.5 P W All gene names: rpl-19; C09D4.5; C09D4.5.1; C09D4.5.2;
C09D4.5.3; 1G54; CE08034; NM_059207; WBGene00004431;
WP:CE08034
WormBase description: rpl-19 encodes a large ribosomal
subunit L19 protein.
WormBase CDS description: 60S ribosomal protein L19
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C09D8.1 Aff_C09D8.1 P W All gene names: ptp-3; ptp-3A; ptp-3B; ypp-1; C09D8.1;
2L301; CE30244; CE30245; CE32793; WBGene00004215;
WP:CE30244; WP:CE30245; WP:CE32793; YPP/1
WormBase description: ptp-3 encodes a receptor-like
tyrosine phosphatase orthologous to the LAR (Leukocyte
Common Antigen Related, OMIM:179590) subfamily of
receptor-like tyrosine phosphatases that contain
extracellular immunoglobulin-like and fibronectin type
III domains and have been implicated in linking cell
adhesion to intracellular phosphotyrosine levels; PTP-3
plays a role in gastrulation and epidermal development
and functions partly redundantly with the VAB-1 Eph
receptor and ephrins VAB-2 and EFN-4 to regulate
embryonic morphogenesis; PTP-3 is expressed in many
tissues during early embryogenesis, but expression
later becomes localized to neuronal processes and
epithelial adherens junctions.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Romagnolo et al 2002 Fig3b
signaling, ViswanathanM et al 2005 S2 sir-2.1
regulated
C09G4.1 Aff_C09G4.1 P W All gene names: LAG1-1; hyl-1; C09G4.1; C09G4.1.1;
C09G4.1.2; 4J307; CE27675; NM_069058; WBGene00002043;
WP:CE27675
WormBase description: hyl-1 encodes a predicted
transmembrane protein that is related to Saccharomyces
cerevisiae LAG1 (longevity assurance gene), a protein
preferentially expressed in young yeasts; by homology,
HYL-1 is predicted to have several possible functions,
including regulation of lipid, particularly ceramide,
biosynthesis, regulation of lipid transport, and
regulation of protein translocation in the endoplasmic
reticulum; in C. elegans, however, neither the precise
role of HYL-1 in development and/or behavior nor the
hyl-1 expression pattern is yet known.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
C09G4.4 Aff_C09G4.4 P W All gene names: C09G4.4; CE03981; WBGene00044001;
WP:CE03981
C09G5.2 Aff_C09G5.2 P W All gene names: C09G5.2; 2K992; CE15608;
WBGene00007488; WP:CE15608
WormBase description: C09G5.2 encodes an ortholog of S.
cerevisiae DPH2/YKL191W and human DPH2L2 (OMIM:603456);
C09G5.2 is a putative protein component of diphtamide
synthesis; C09G5.2 has no obvious function in mass RNAi
assays.
WormBase CDS description: Diphthamide biosynthesis
protein (diptheria resistance protein)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C
C09H10.2 Aff_C09H10.2 P W All gene names: rpl-41; C09H10.2; C09H10.2.1;
C09H10.2.2; C09H10.2.3; 2L388; CE02131; NM_063974;
WBGene00004454; WP:CE02131
WormBase description: rpl-41 encodes a large ribosomal
subunit L41 protein; by homology, RPL-41 is predicted
to function in protein biosynthesis.
WormBase CDS description: 60S ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Romagnolo et al 2002 Fig3b Protein Synthesis
C09H6.1 Aff_C09H6.1 P W All gene names: spr-4; C09H6.1; 1I685; CE15609;
CE30487; WBGene00005009; WP:CE15609; WP:CE30487
WormBase description: Zinc finger, C2H2 type (11
domains)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, ViswanathanM et al 2005 S2 sir-2.1
regulated
C09H6.3 Aff_C09H6.3 P W All gene names: mau-2; C09H6.3; 1I705; CE15611;
NM_059827; WBGene00003136; WBGene00007498; WP:CE15611
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
C10A4.8 Aff_C10A4.8 P W All gene names: C10A4.8; CE35391; WBGene00015669;
WP:CE35391; XI30
WormBase description: Zinc finger protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C10B5.1 Aff_C10B5.1 P W All gene names: C10B5.1; 5J63; CE30722; WBGene00015670;
WP:CE30722
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
C10C6.1 Aff_C10C6.1 P W All gene names:
