Gene name Source Gene ID Annotation Date Added by
AFF_T08G5.7 Aff_T08G5.7 P W
B0272.1 Aff_B0272.1 P W All gene names: tbb-4; B0272.1; CE00850; NM_077184;
WBGene00006538; WP:CE00850; XK54
WormBase description: tubulin beta chain
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Portman et al 2004 T1 newly found ray-genes
in25c, Portman et al 2004 T1 25 candidate ray genes,
Reinke et al 2004, IVb male soma enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated
B0303.2 Aff_B0303.2 P W All gene names: B0303.2; 3J775; CE00536;
WBGene00015124; WP:CE00536
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C01F1.3 Aff_C01F1.3 P W All gene names: phi-41; C01F1.3; C01F1.3a.1;
C01F1.3a.2; 2E587; CE06744; CE39553; WBGene00015298;
WP:CE06744; WP:CE39553
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Metabolism,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C02F12.1 Aff_C02F12.1 P W All gene names: tsp-17; C02F12.1; CE35213; NM_076233;
WBGene00006643; WP:CE35213; XE303
WormBase description: transpanin
C02F12.7 Aff_C02F12.7 P W All gene names: tag-278; C02F12.7; CE03901;
WBGene00015356; WP:CE03901; XE304
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
C05A9.2 Aff_C05A9.2 P W All gene names: C05A9.2; CE05222; WBGene00007317;
WP:CE05222; XL460
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05
C05B5.8 Aff_C05B5.6 P W All gene names: C05B5.8; 3L96; CE33967; WBGene00007324;
WP:CE33967
C05C8.3 Aff_C05C8.3 P W All gene names: dao-1; fkb-3; C05C8.3; 5H707; CE07921;
NM_072434; WBGene00001428; WP:CE07921
WormBase description: fkb-3 encodes a peptidylprolyl
cis/trans isomerase homologous to mammalian FK506
immunosuppressant-binding protein 9; FKB-3 expression
is positively regulated by signaling through the DAF-2
insulin receptor-like pathway and the activity of the
DAF-16 fork-head transcription factor suggesting that
FKB-3 could play a role in metabolism and longevity;
however, as loss of FKB-3 function via RNA-mediated
interference (RNAi) does not result in any
abnormalities, the precise role of FKB-3 in C. elegans
development and/or behavior is not yet known; FKB-3
contains a predicted endoplasmic reticulum (ER)
retention sequence and is thus proposed to localize to
the ER.
WormBase CDS description: FKBP-binding protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C10A4.3 Aff_C10A4.3 P W All gene names: C10A4.3; CE02471; WBGene00015664;
WP:CE02471; XI19
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C14A4.6 Aff_C14A4.6 P W All gene names: C14A4.6; C14A4.6.1; C14A4.6.2; 2K884;
CE02147; WBGene00007557; WP:CE02147
C14F11.6 Aff_C14F11.6 P W All gene names: C14F11.6; CE02482; WBGene00015781;
WP:CE02482; XG856
WormBase description: DTDP-4-dehydrorhamnose
3,5-epimerase (RFBC gene)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S5 genes common to feeding ANOVA, Wang
et al 2003 S3 genes pass one-way ANOVA
C17C3.12 Aff_C17C3.12 P W All gene names: acdh-2; C17C3.12; C17C3.12c.1;
C17C3.12c.2; CE29175; CE29176; CE34697; NM_062665;
NM_062666; NM_062667; WBGene00015894; WP:CE29175;
WP:CE29176; WP:CE34697
WormBase description: acyl-CoA dehydrogenase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C23F12.1 Aff_B0272.5 P W All gene names: C23F12.1; CE32133; CE32134;
WBGene00016006; WP:CE32133; WP:CE32134; XK45
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C26G2.1 Aff_C26G2.1 P W All gene names: syg-2; C26G2.1; CE19703; NM_078034;
WBGene00007750; WP:CE19703; XP281
WormBase description: syg-2 encodes a transmembrane
protein that is a member of the immunoglobulin
superfamily of proteins; during larval development,
SYG-2 activity is required in vulval epithelial cells
for proper synaptic specificity of the HSNL neuron; in
regulating synapse formation, SYG-2 acts as a guidepost
protein for the SYG-1 receptor that interacts with
SYG-2 and acts within HSNL to regulate synaptic
specificity; a SYG-2::GFP fusion protein is expressed
in the primary vulval cell lineages beginning at the L3
larval stage, with expression increasing during the L4
stage and finally disappearing by adulthood; in
embryos, SYG-2::GFP expression is detected in some head
neurons and body wall muscles, the latter of which also
express the reporter during the L1 and L2 larval
stages.
WormBase CDS description: Immunoglobulin domain ;
Fibronectin type III domain
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C27C12.6 Aff_C27C12.6 P W All gene names: dmd-4; C27C12.6; CE23560;
WBGene00007776; WP:CE23560; XP476
WormBase description: doublesex protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C33D12.7 Aff_C33D12.7 P W All gene names: ceh-30; C33D12.7; CE06909; NM_076123;
WBGene00000451; WP:CE06909; XD683
WormBase description: ceh-30 encodes a homeodomain
protein most similar to Drosophila and mammalian BarH1
(OMIM:605211) which function in neuronal cell fate
determination; the precise biological role of CEH-30 in
C. elegans development and/or behavior is not yet
known.
WormBase CDS description: homeobox protien
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C33F10.7 Aff_C33F10.7 P W All gene names: C33F10.7; C33F10.7b.1; C33F10.7b.2;
2F108; CE04140; CE37751; WBGene00016355; WP:CE04140;
WP:CE37751
WormBase description: esterase and beta-lactamase
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C54D1.4 Aff_C54D1.4 P W All gene names: alh-10; C54D1.4; C54D1.4.1; C54D1.4.2;
CE06980; NM_076802; WBGene00000116; WP:CE06980; XH760
WormBase description: aldehyde dehydrogenase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
D1005.2 Aff_D1005.2 P W All gene names: D1005.2; CE29741; WBGene00016996;
WP:CE29741; XC81
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
DY3.3 Aff_DY3.3 P W All gene names: hlh-16; DY3.3; 1J342; CE15747;
NM_059971; WBGene00001960; WP:CE15747
WormBase description: Helix-loop-helix DNA-binding
domain
F14B4.1 Aff_F14B4.1 P W All gene names: F14B4.1; 1J842; CE38950;
WBGene00008779; WP:CE38950
WormBase description: LDL receptor-related protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order
F21D5.9 Aff_F21D5.9 P W All gene names: F21D5.9; 4J485; CE03251;
WBGene00009014; WP:CE03251
WormBase description: Zinc finger, C2H2 type
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F35G2.4 Aff_F35G2.4 P W All gene names: phy-2; F35G2.4; F35G2.4.1; F35G2.4.2;
4M976; CE05811; NM_069916; WBGene00004025; WP:CE05811
WormBase description: prolyl 4-hydroxylase alpha
subunit
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster A, Reinke et al 2004, list of genes in
cluster order, Romagnolo et al 2002 Fig3b others
F37C4.4 Aff_F37C4.4 P W All gene names: F37C4.4; F37C4.4b.1; F37C4.4b.2; 4E635;
CE17047; CE31505; WBGene00018144; WP:CE17047;
WP:CE31505
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F38B6.6 Aff_F38B6.6 P W All gene names: F38B6.6; CE30976; WBGene00018175;
WP:CE30976; XH300
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
daf-16 Resveratrol
F40E10.1 Aff_F40E10.1 P W All gene names: hch-1; nas-34; F40E10.1; CE24964;
NM_078039; WBGene00001828; WP:CE24964; XP316
WormBase description: hch-1 encodes a member of the
zinc-dependent metalloprotease family that contains an
epidermal growth factor-like domain, a CUB domain, and
a TSP1 domain and affects hatching and QL neuroblast
migration.
WormBase CDS description: metalloprotease
Member of lists (Publications lists):
Golden et al 2004, N2 vs daf-2
different genes at , Golden et al 2004, N2 vs daf-2 age
different gene, Jones et al 2001 Non dauer genes
P<0.05
F44E5.3 Aff_F44E5.3 P W All gene names: F44E5.3; 2M52; CE18678; WBGene00009690;
WP:CE18678
F52H3.1 Aff_F52H3.1 P W All gene names: let-268; F52H3.1; F52H3.1.1; F52H3.1.2;
F52H3.1.3; 2K324; CE03397; NM_063769; WBGene00002497;
WP:CE03397
WormBase description: let-268 encodes a procollagen
lysyl hydroxylase that processes type IV collagen, a
collagen secreted and incorporated into the basement
membrane during embryogenesis (and encoded partly by
emb-9); LET-268 activity is essential for type IV
collagen processing and secretion and for the
stability, but not the formation of, the basement
membrane that provides mechanical support to body wall
muscle once contraction begins; LET-268 also appears to
be required for pharyngeal muscle contraction.
WormBase CDS description:
procollagen-lysine,2-oxoglutarate 5-dioxygenase
precusor
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F54A5.2 Aff_F54A5.C P W All gene names: F54A5.2; F54A5.C; 1B438; CE20860;
WBGene00018787; WP:CE20860
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
herm enriched gen
F58A6.1 Aff_F58A6.1 P W All gene names: F58A6.1; 2F429; CE04675;
WBGene00019022; WP:CE04675
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
K07C11.4 Aff_K07C11.4 P W All gene names: K07C11.4; 5I685; CE07347;
WBGene00019477; WP:CE07347
WormBase description: esterase
Member of lists (Publications lists):
Reinke et al 2004, GO categories,
Reinke et al 2004, herm soma enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Zhang et
al 2002, T1 mec-3 dependent genes
K08A8.2 Aff_K08A8.2 P W All gene names: sox-2; K08A8.2; K08A8.2a.1; K08A8.2a.2;
K08A8.2b.1; K08A8.2b.2; K08A8.2b.3; CE28595; CE31200;
NM_171725; NM_171726; WBGene00004949; WP:CE28595;
WP:CE31200; XI78
WormBase description: The sox-2 gene encodes a homolog
of human SRY, which when mutated leads to gonadal
dysgenesis (OMIM:306100).
K08B4.2 Aff_K08B4.2 P W All gene names: K08B4.2; 4G840; CE25940;
WBGene00019514; WP:CE25940
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster E, ViswanathanM et al 2005 S2 daf-16
Resveratrol
K09E2.4 Aff_K09E2.4 P W All gene names: rig-1; K09E2.4; CE02817; CE34053;
WBGene00004369; WP:CE02817; WP:CE34053; XJ289
M01H9.4 Aff_M01H9.4 P W All gene names: M01H9.4; 4F244; CE39601;
WBGene00019720; WP:CE39601
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order
R09F10.4 Aff_R09F10.4 P W All gene names: inx-5; opu-5; R09F10.4; CE33811;
NM_077002; WBGene00002127; WP:CE33811; XI916
WormBase description: inx-5 encodes a predicted member
of the innexin family; expressed in the embryonic
hypodermis, developing vulva, seam cells, and
spermatheca.
WormBase CDS description: unc-7-like protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Transporters,
Wang et al 2003 S4 Early genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
T06A10.2 Aff_C26C9.2 P W All gene names: T06A10.2; 4R835; CE36609;
WBGene00020285; WP:CE36609
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
T22B2.4 Aff_T22B2.4 P W All gene names: sup-12; T22B2.4; CE13934; NM_076273;
WBGene00006321; WBGene00020668; WP:CE13934; XE525
WormBase description: RNA-binding protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
T22E5.3 Aff_T22E5.3 P W All gene names: T22E5.3; CE37152; WBGene00020691;
WP:CE37152; XH5
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
T27A1.5 Aff_T27A1.5 P W All gene names: T27A1.5; T27A1.5a.1; T27A1.5a.2;
T27A1.5b.1; T27A1.5b.2; 2A815; CE14213; CE39784;
WBGene00020837; WP:CE14213; WP:CE39784
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
Wang et al 2003 S4 Early genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
T28B4.3 Aff_T28B4.3 P W All gene names: T28B4.3; CE14325; WBGene00020886;
WP:CE14325; XH214
Member of lists (Publications lists):
Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, wt herm vs wt herm enriched gen,
Reinke et al 2004, GO categories, Reinke et al 2004,
fem3 enriched genes, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang
et al 2003 S4 genes pass two-wayANOVA P0
T28H10.1 Aff_T28H10.1 P W All gene names: T28H10.1; 5M985; CE06529;
WBGene00012142; WP:CE06529
WormBase description: B.subtilis SFP protein like
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
W03A3.1 Aff_W03A3.1 P W All gene names: ceh-10; mig-11; W03A3.1; 3G889;
CE07563; NM_065850; WBGene00000435; WP:CE07563
WormBase description: ceh-10 encodes a member of the
Paired-like class of homeodomain proteins; the CEH-10
homeodomain is closely related to the homeodomains of
two vertebrate retina proteins (Chx10 from mice and
Vsx-1 from goldfish); ceh-10 is required for CAN cell
fate specification and migration, complete loss of
ceh-10 function results in failure of CAN cell
migration and loss of expression of CEH-23 and CEH-10
itself in the CAN and AIY interneurons; CEH-10, along
with TTX-3 and CEH-23, constitutes a regulatory cascade
of transcription factors that controls all sub-type
specific features of the AIY interneurons.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
daf-16 Resveratrol
Y22D7AL.14 Aff_Y119D3_465.U P W All gene names: Y22D7AL.14; 3C742; CE23435;
WBGene00021252; WP:CE23435
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
Y41D4B.26 Aff_Y41D4B_930.A P W All gene names: nhr-146; Y41D4B.26; 4C397; CE36740;
WBGene00021525; WP:CE36740
Y53F4B.14 Aff_Y53F4B.Q P W All gene names: Y53F4B.14; 2P325; CE25395;
WBGene00013161; WP:CE25395
Y82E9BR.20 Aff_Y119D3_444.A P W All gene names: Y82E9BR.20; 3C465; CE29934;
WBGene00022352; WP:CE29934
ZC8.3 Aff_ZC8.2 P W All gene names: tag-226; ZC8.3; CE33744;
WBGene00022499; WP:CE33744; XF621
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
ZK75.2 Aff_ZK75.2 P W All gene names: ins-2; ZK75.2; 2G277; CE02101;
NM_062793; WBGene00002085; WP:CE02101
WormBase description: 7TM chemoreceptor, ins family
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated
genes, ViswanathanM et al 2005 S2 sir-2.1 regulated
