Gene name Source Gene ID Annotation Date Added by
AFF_B0564.10 Aff_B0564.10 P W
AFF_C49A1.8 Aff_C49A1.8 P W
AFF_F22D6.13 Aff_F22D6.13 P W
AFF_F32A5.7 Aff_F32A5.7 P W
AFF_F39E9.3 Aff_F39E9.3 P W
AFF_H24O09.C Aff_H24O09.C P W
AFF_R11G1.2 Aff_R11G1.2 P W
AFF_T13C5.6 Aff_T13C5.6 P W
AFF_T23H2.6 Aff_T23H2.6 P W
AFF_Y41D4A_2491.A Aff_Y41D4A_2491.A P W
AFF_Y71F9A_294.B Aff_Y71F9A_294.B P W
AFF_ZK688.7 Aff_ZK688.7 P W
B0024.14 Aff_B0024.14 P W All gene names: crm-1; B0024.14; B0024.14c.1;
B0024.14c.2; 5K804; CE31276; CE31277; CE31278; CE31279;
CE36907; NM_171529; NM_171530; NM_171531; NM_171935;
WBGene00007103; WP:CE31276; WP:CE31277; WP:CE31278;
WP:CE31279; WP:CE36907
WormBase description: pro-collagen domains
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0218.1 Aff_B0218.1 P W All gene names: B0218.1; B0218.1a.1; B0218.1a.2;
B0218.1a.3; B0218.1a.4; B0218.1a.5; B0218.1b.1;
B0218.1b.2; B0218.1b.3; 4I925; CE06684; CE33351;
WBGene00015047; WP:CE06684; WP:CE33351
WormBase description: amidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0238.11 Aff_B0238.11 P W All gene names: B0238.11; B0238.11.1; B0238.11.2;
5F747; CE07701; WBGene00015075; WP:CE07701
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
B0252.3 Aff_B0252.3 P W All gene names: B0252.3; B0252.3c.1; B0252.3c.2; 2H194;
CE30586; CE32095; CE34631; WBGene00015088; WP:CE30586;
WP:CE32095; WP:CE34631
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
B0304.1 Aff_B0304.1 P W All gene names: hlh-1; B0304.1; 2E811; CE02423;
CE30067; CE31766; MyoD1; WBGene00001948; WP:CE02423;
WP:CE30067; WP:CE31766
WormBase description: hlh-1 encodes a basic
helix-loop-helix (bHLH) transcription factor that is
the sole C. elegans member of the myogenic regulatory
factor (MRF) subgroup of bHLH proteins; in C. elegans,
HLH-1 activity is required during embryonic development
for the proper differentiation and function of body
wall muscle cells, indicating that unlike its
vertebrate counterparts, hlh-1 is not absolutely
required for body wall muscle specification; however,
ectopic expression of hlh-1 in the embryo is sufficient
to convert nearly all embryonic cell types to a
muscle-like fate; in regulating body wall muscle cell
development in some cell lineages, hlh-1 likely lies
downstream of the PAL-1 homeodomain protein that is
required for specification of the C and D founder cell
fates; HLH-1 is expressed in nuclei and first appears
in body wall muscle precursors beginning at the
~80-cell stage of embryogenesis; expression then
continues in these cells and their differentiated
descendants throughout embryonic, larval, and adult
stages of development.
WormBase CDS description: helix-loop-helix
transcription factor
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Roy
et al 2002 S2 positivecontrol L1 muscle, ViswanathanM
et al 2005 S2 sir-2.1 regulated
B0336.1 Aff_B0336.1 P W All gene names: wrm-1; B0336.1; B0336.1.1; B0336.1.2;
3G815; CE26743; NM_065835; WBGene00006943; WP:CE26743
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0336.10 Aff_B0336.10 P W All gene names: rpl-23; B0336.10; B0336.10.1;
B0336.10.2; 3G794; CE00778; NM_065830; WBGene00004435;
WP:CE00778
WormBase description: rpl-23 encodes a large ribosomal
subunit L23 protein.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0412.4 Aff_B0412.4 P W All gene names: rps-29; B0412.4; B0412.4.1; B0412.4.2;
3B413; CE26849; NM_064862; WBGene00004498; WP:CE26849
WormBase description: rps-29 encodes a small ribosomal
subunit S29 protein; by homology, RPS-29 is predicted
to function in protein biosynthesis; in C. elegans,
RPS-29 activity is broadly required for embryonic and
germline development, normal body coloration and
morphology, normal postembryonic growth rates, and the
overall health of the animal.
WormBase CDS description: 40S ribosomal protein S29
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C01F1.1 Aff_C01F1.1 P W All gene names: C01F1.1; 2E595; CE06742;
WBGene00015296; WP:CE06742
WormBase description: dna binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C01G10.8 Aff_C01G10.8 P W All gene names: C01G10.8; C01G10.8.1; C01G10.8.2;
5P564; CE07817; WBGene00007235; WP:CE07817
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
C01G6.2 Aff_C01G6.2 P W All gene names: C01G6.2; 2J557; CE02958;
WBGene00007224; WP:CE02958
Member of lists (Publications lists):
Reinke et al 2004, herm sperm, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, spermatogenesis enriched genes, Reinke et al
2004, wt herm vs wt herm enriched gen, Reinke et al
2004, fem3 enriched genes, Reinke et al 2004, IVb male
soma enriched genes, Reinke et al 2004, wt vs glp-4
enriched genes, Reinke et al 2004, list of genes in
cluster D, ViswanathanM et al 2005 S2 sir-2.1
regulated
C03A7.4 Aff_C03A7.4 P W All gene names: pqn-5; C03A7.4; 5F633; CE07862;
NM_071981; WBGene00004099; WP:CE07862
WormBase description: The protein product of this gene
is predicted to contain a glutamine/asparagine
(Q/N)-rich ('prion') domain, by the algorithm of
Michelitsch and Weissman (as of the WS77 release of
WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 T1 pqn genes
C03B1.7 Aff_C03B1.7 P W All gene names: C03B1.7; CE03909; WBGene00015378;
WP:CE03909; XG963
C03D6.8 Aff_C03D6.8 P W All gene names: rpl-24.2; C03D6.8; C03D6.8.1;
C03D6.8.2; 1K245; CE05202; NM_060171; WBGene00004437;
WP:CE05202
WormBase description: rpl-24.2 encodes a large
ribosomal subunit L24 protein paralog; its orthologs
include ribosomal protein L30 isologs from mammals and
'Ribosomal Like Protein 24' (Rlp24p) from S.
cerevisiae; it therefore appears to actually represent
an ancient paralogy between two varieties of eukaryotic
L24 protein.
WormBase CDS description: ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C05C8.2 Aff_C05C8.2 P W All gene names: C05C8.2; 5H713; CE07920;
WBGene00015461; WP:CE07920
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C05E4.9 Aff_H24O09.A P W All gene names: gei-7; C05E4.9; C05E4.9a.1; C05E4.9a.2;
C05E4.9a.3; C05E4.9b.1; C05E4.9b.2; 5B204; CE23521;
CE32565; NM_070905; WBGene00001564; WP:CE23521;
WP:CE32565
WormBase description: gei-7 encodes a predicted
isocitrate lyase/malate synthase, an enzyme known to
function in the glyoxylate cycle; GEI-7 was identified
in a screen for proteins that interact with GEX-3, a
homolog of human HEM-2 which is required for embryonic
development; GEI-7 is required for embryonic
morphogenesis and appears to act downstream of DAF-16
to influence lifespan.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Murphy et al 2003 Fig2 Class1 elongate
lifespan, ViswanathanM et al 2005 S2 sir-2.1 regulated
C06E2.5 Aff_C06E2.5 P W All gene names: C06E2.5; C06E2.5.1; C06E2.5.2; CE30595;
WBGene00015529; WP:CE30595; XJ476
C07A12.7 Aff_C07A12.7 P W All gene names: C07A12.7; C07A12.7a.1; C07A12.7a.2;
C07A12.7c.1; C07A12.7c.2; CE25764; CE27055; CE33557;
WBGene00015561; WP:CE25764; WP:CE27055; WP:CE33557;
XF138
C07B5.5 Aff_C07B5.5 P W All gene names: nuc-1; C07B5.5; CE00895; NM_077203;
WBGene00003828; WP:CE00895; XK159
WormBase description: The nuc-1 gene encodes a DNase II
homolog similar to mammalian and Drosophila DNaseII
enzymes and is required for DNA degradation during
apoptosis as well as for degradation of dietary DNA
during normal feeding; during apoptosis, NUC-1
functions in apoptotic cells at an intermediate stage
of DNA degradation, after the killing step, but prior
to cell-corpse engulfment.
Member of lists (Publications lists):
Golden et al 2004, daf-2
differentially expressed , McCarroll et al 2004
SFig1-4 conserved w/ Drosoph, ViswanathanM et al 2005
S2 sir-2.1 regulated
C08B11.9 Aff_C08B11.9 P W All gene names: C08B11.9; CE01479; WBGene00007436;
WP:CE01479
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C10C5.3 Aff_C10C5.3 P W All gene names: C10C5.3; 4K139; CE03011;
WBGene00007507; WP:CE03011
WormBase description: aminoacylase-1
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated
C10C5.5 Aff_C10C5.5 P W All gene names: C10C5.5; 4K147; CE36099;
WBGene00007509; WP:CE36099
WormBase description: aminoacylase-1
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, GO categories, Reinke et
al 2004, IVb male soma enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
C11H1.4 Aff_C11H1.6 P W All gene names: prx-1; C11H1.4; CE30339; NM_077985;
WBGene00004191; WP:CE30339; XO943; pex1
WormBase description: prx-1 encodes a predicted
peroxin, a subfamily 2 member of the AAA (ATPases
Associated with diverse cellular Activities) family
that affects growth in one large-scale RNAi screen;
expressed in intestinal cells throughout development.
WormBase CDS description: peroxisome biosynthesis
protein like
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C13F10.7 Aff_C13F10.7 P W All gene names: C13F10.7; 5H702; CE08148;
WBGene00015746; WP:CE08148
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C14A4.4 Aff_C14A4.4 P W All gene names: crn-3; C14A4.4; 2K881; CE02145;
CE32797; NM_063882; NM_182164; WBGene00000796;
WP:CE02145; WP:CE32797
WormBase description: crn-3 encodes a cell
death-related nuclease, homologous to the 100 kDa
polymyositis/scleroderma autoantigen (PM/Scl-100), that
is required for normal levels of DNA degradation during
apoptosis; PM/Scl-100 is a ribonuclease component of
the multiexonuclease exosome complex, which processes
or degrades several types of RNAs in yeast; crn-3(RNAi)
animals show retarded growth and a low penetrance of
embryonic lethality; CRN-3 promotes both DNA
degradation and cell corpse engulfment, in a partially
redundant pathway that includes CRN-2 but is parallel
to CPS-6; CRN-3 is predicted to be mitochondrial.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, oogenesis enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated
C14B9.2 Aff_C14B9.2 P W All gene names: C14B9.2; C14B9.2.1; C14B9.2.2; 3J225;
CE30601; WBGene00015752; WP:CE30601
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: erp72
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C14H10.2 Aff_C14H10.2 P W All gene names: C14H10.2; CE23543; WBGene00007592;
WP:CE23543; XK862
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, herm soma enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C16A3.6 Aff_C16A3.6 P W All gene names: C16A3.6; 3H469; CE04006;
WBGene00015811; WP:CE04006
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated
genes, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
C16C10.6 Aff_C16C10.6 P W All gene names: C16C10.6; 3F258; CE01497;
WBGene00007627; WP:CE01497
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, oogenesis enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, list of genes in cluster E, Romagnolo et al
2002 Fig3b others, ViswanathanM et al 2005 S2 sir-2.1
regulated
C17G1.7 Aff_C17G1.7 P W All gene names: C17G1.7; C17G1.7.1; C17G1.7.2; CE39223;
WBGene00007653; WP:CE39223; XK572
WormBase description: cysteine synthase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order
C23H4.6 Aff_C23H4.6 P W All gene names: C23H4.6; CE08332; WBGene00007694;
WP:CE08332; XM859
WormBase description: Yeast RAD18 protein like
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C26D10.2 Aff_C26D10.2 P W All gene names: hel-1; C26D10.2; C26D10.2b.1;
C26D10.2b.2; 2I618; CE03025; CE32593; WBGene00001840;
WP:CE03025; WP:CE32593; hel
WormBase description: translation initiation factor
eIF-4A
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C26F1.4 Aff_C26F1.4 P W All gene names: rps-30; C26F1.4; C26F1.4.1; C26F1.4.2;
C26F1.4.3; 5I257; CE06878; NM_072606; WBGene00004499;
WP:CE06878
WormBase description: rps-30 encodes two proteins, a
small ribosomal subunit S30 protein and ubiquitin,
which is cleaved from the ribosomal protein
posttranslationally; by homology, S30 is predicted to
function in protein biosynthesis and ubiquitin in
protein degradation; in C. elegans, loss of rps-30
function via RNA-mediated interference (RNAi) does not
result in any obvious abnormalities.
WormBase CDS description: ribosomal
protein/ubiquitin-like protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C27D8.3 Aff_C27D8.3 P W All gene names: C27D8.3; 4N472; CE08422; CE39679;
WBGene00007779; WP:CE08422; WP:CE39679
WormBase description: The C27D8.3 gene encodes a
protein that may be involved in apoptosis.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C28H8.1 Aff_C28H8.1 P W All gene names: C28H8.1; 3H17; CE01820; WBGene00016192;
WP:CE01820
WormBase description: C28H8.1 is orthologous to the
human gene BCL7A (OMIM:601406), which when mutated
leads to high-grade B-cell non-Hodgkin lymphoma.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, oogenesis enriched genes,
Reinke et al 2004, IVb male soma enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005
S2 sir-2.1 regulated
C29F3.1 Aff_C29F3.1 P W All gene names: ech-1; C29F3.1; 5P838; CE08435;
NM_074409; WBGene00001150; WP:CE08435
WormBase description: long-chain enoyl-CoA hydratase
C31H2.4 Aff_C31H2.4 P W All gene names: C31H2.4; CE04132; WBGene00016294;
WP:CE04132; XF772
WormBase description: C31H2.4 is orthologous to human
4-HYDROXYPHENYLPYRUVATE DIOXYGENASE (HPD; OMIM:276710),
which when mutated leads to tyrosinemia type III;
C31H2.4 is somewhat less similar to human HPD than C.
elegans HPD-1 (to which C31H2.4 is paralogous).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated
C31H5.4 Aff_C31H5.4 P W All gene names: C31H5.4; C31H5.4.1; C31H5.4.2; 1J618;
CE17484; NM_060029; WBGene00007855; WP:CE17484
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
C33H5.12 Aff_C33H5.12 P W All gene names: rsp-6; srp-1; C33H5.12; C33H5.12a.1;
C33H5.12a.2; C33H5.12b.1; C33H5.12b.2; 4I554; CE04155;
CE29697; CE29698; CeSRp20; NM_171383; NM_171384;
NM_171385; WBGene00004703; WP:CE04155; WP:CE29697;
WP:CE29698
WormBase description: RNA binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C34G6.4 Aff_C34G6.4 P W All gene names: pgp-2; C34G6.4; 1G471; CE29212;
NM_059306; WBGene00003996; WP:CE29212
WormBase description: pgp-2 encodes a member of the ABC
transporter family with highest similarity to the
vertebrate MDR (multidrug resistance) family, and is
orthologous to human MDR1 (ABCB1; OMIM:171050, mutated
in Crohn disease); PGP-2 is expressed at lower levels
during the embryonic stages with higher expression
later in development.
WormBase CDS description: abc transporter
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C
C36B7.6 Aff_C36B7.6 P W All gene names: C36B7.6; C36B7.6.1; C36B7.6.2; CE34267;
WBGene00016469; WP:CE34267; XH716
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C36E8.5 Aff_C36E8.5 P W All gene names: rot-2; tbb-2; C36E8.5; C36E8.5.1;
C36E8.5.2; C36E8.5.3; 3F106; CE00913; NM_065405; TUBB8;
WBGene00006537; WP:CE00913
WormBase description: tbb-2 encodes a homolog of
mammalian beta-tubulin (TUBB) that is expressed at high
levels in the germline; TBB-2 is redundant for
embryonic viability, due to its paralog TBB-1; however,
unlike its paralog TBB-1 it is preferred for normal
microtubule severing by the katanin complex
MEI-1/MEI-2; TBB-2 is required together with TBB-1,
TBA-1, and tba-2 to make spindle structures in embryos
and TBB-2 also affects the stability of the PO spindle;
first divisions are normal in null mutants, but
putative gain-of-function mutations affect centrosome
rotations in the P0, P1, and EMS blastomeres of the
early embryo, and affect pronuclear migration and
meiosis.
WormBase CDS description: beta tubulin
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C37A2.7 Aff_C37A2.7 P W All gene names: C37A2.7; C37A2.7.1; C37A2.7.2; 1H366;
CE30433; WBGene00016493; WP:CE30433
WormBase description: ribosomal protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated
C37C3.2 Aff_C37C3.2 P W All gene names: phi-18; C37C3.2; C37C3.2a.1;
C37C3.2a.2; C37C3.2b.1; C37C3.2b.2; C37C3.2b.3;
C37C3.2b.4; C37C3.2c.1; C37C3.2c.2; 5I337; CE27367;
CE29707; CE32821; WBGene00016496; WP:CE27367;
WP:CE29707; WP:CE32821
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
C37E2.5 Aff_C37E2.5 P W All gene names: ceh-37; C37E2.5; CE08624; NM_077965;
WBGene00000458; WP:CE08624; XO816
WormBase description: ceh-37 encodes one of three C.
elegans proteins with an OTX-like homeodomain; however,
CEH-37 lacks other domains found in OTX proteins, and
the CEH-37 homeodomain is predicted to resemble the Myb
domain of telomere-binding proteins; CEH-37 binds the
telomeric sequence 'TTAGGC' if it is repeated at least
1.5 times, and is mainly localized to the telomere in
vivo; ceh-37 mutants have a weak increase in
chromosomal nondisjunction; CEH-37 is involved in
specifying some aspects of the AWB olfactory neuron
fate, such as expression of an AWB-specific odorant
receptor and a LIM-class homeodomain protein, LIM-4;
CEH-37 is expressed broadly in the early embryo, while
in larvae and adults it is expressed solely in the
excretory cell.
WormBase CDS description: Homeobox domain
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C37H5.5 Aff_C37H5.5 P W All gene names: C37H5.5; C37H5.5.1; C37H5.5.2; 5F313;
CE29708; WBGene00016508; WP:CE29708
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
C38C10.5 Aff_C38C10.5 P W All gene names: mdt-14; rgr-1; C38C10.5; 3K493;
CE34528; CE34529; NM_066666; NM_066667; WBGene00004343;
WP:CE34528; WP:CE34529
WormBase description: RGR1 (yeast)
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C39F7.2 Aff_Y50D4A_25.A P W All gene names: C39F7.2; C39F7.2.1; C39F7.2.2; 5B704;
CE27581; WBGene00016539; WP:CE27581
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C41G7.3 Aff_C41G7.3 P W All gene names: C41G7.3; 1K94; CE08667; WBGene00008061;
WP:CE08667
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, Fig2b shared gemlines, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt males
vs glp4 male enriched , Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C42D8.3 Aff_C42D8.3 P W All gene names: uvt-3; C42D8.3; CE04204; NM_076465;
WBGene00006862; WP:CE04204; XF711
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
C43H8.1 Aff_C43H8.1 P W All gene names: C43H8.1; C43H8.1.1; C43H8.1.2; 1L201;
CE19377; WBGene00016621; WP:CE19377
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
C44C8.1 Aff_C44C8.1 P W All gene names: C44C8.1; 4B655; CE17541;
WBGene00016646; WP:CE17541
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, herm soma enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C44E4.4 Aff_C44E4.4 P W All gene names: C44E4.4; C44E4.4.1; C44E4.4.2; 1F203;
CE08718; WBGene00016653; WP:CE08718
WormBase description: RNA-binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, oogenesis enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C50A2.4 Aff_C50A2.4 P W All gene names: C50A2.4; 4B908; CE17582;
WBGene00016798; WP:CE17582
C50B8.3 Aff_C50B8.3 P W All gene names: C50B8.3; 5O46; CE08883; WBGene00008225;
WP:CE08883
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C50F4.13 Aff_C50F4.13 P W All gene names: his-35; C50F4.13; C50F4.13.1;
C50F4.13.2; C50F4.13.3; 5K22; CE05477; NM_073062;
WBGene00001909; WP:CE05477
WormBase description: his-35 encodes an H2A histone.
WormBase CDS description: histone H2A
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, ViswanathanM et al 2005 S2 sir-2.1 regulated
C52B9.8 Aff_C52B9.8 P W All gene names: C52B9.8; CE27114; WBGene00016868;
WP:CE27114; XE918
WormBase description: helicase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
C54A12.1 Aff_C54A12.1 P W All gene names: ptr-6; C54A12.1; 2F534; CE39341;
NM_062585; WBGene00004221; WBGene00016908; WP:CE39341
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, Wang et al 2003 S3 genes pass one-way ANOVA,
Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes
pass two-wayANOVA P0
C54G4.6 Aff_C54G4.6 P W All gene names: dod-18; C54G4.6; 1I594; CE05512;
NM_059804; WBGene00008316; WP:CE05512
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: MAF protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, intrinsic, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
C55A6.2 Aff_C55A6.2 P W All gene names: C55A6.2; 5L991; CE29733;
WBGene00008331; WP:CE29733
WormBase description: Human KIAA0173 protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, list of genes in cluster E, Romagnolo et al
2002 Fig3b Unkown, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
C55B7.8 Aff_C55B7.8 P W All gene names: Ce-dbr1; dbr-1; C55B7.8; 1H68; CE30437;
NM_059467; WBGene00000937; WP:CE30437
WormBase description: dbr-1 encodes a homolog of the
RNA lariat-debranching enzyme; DBR-1 is predicted to
function in RNA processing by hydrolyzing the 2'-5'
phosphodiester bond at the branchpoint of excised
lariat intron RNA, thus converting the introns into
linear molecules that can subsequently be degraded by
exonucleases; in C. elegans, DBR-1 activity is required
for embryonic and germline development, as well as for
normal rates of postembryonic growth; overexpression of
C. elegans DBR-1 in Saccharomyces cerevisiae can
complement the RNA processing defects of a dbr1 null
mutant strain, restoring debranching activity and
intron degradation to near wild-type levels.
WormBase CDS description: lariat debranching enzyme
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt vs glp-4 enriched genes, Reinke et al 2004, wt herm
vs wt male enriched gen, Reinke et al 2004, list of
genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
D1007.12 Aff_D1007.12 P W All gene names: rpl-24.1; RPL-24; D1007.12; D1007.12.1;
D1007.12.2; 1F153; CE09047; NM_058998; WBGene00004436;
WP:CE09047
WormBase description: rpl-24.1 encodes a large
ribosomal subunit L24 protein.
WormBase CDS description: 60S ribosomal protein L24
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Romagnolo et al 2002 Fig3b Protein Synthesis,
ViswanathanM et al 2005 S2 sir-2.1 regulated
D1014.8 Aff_D1014.8 P W All gene names: spr-1; D1014.8; 5I608; CE27749;
NM_072697; WBGene00005006; WP:CE27749
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
D2005.5 Aff_D2005.5 P W All gene names: drh-3; ekl-3; D2005.5; 1I401; CE36120;
WBGene00008400; WP:CE36120
WormBase description: RNA helicase like
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Romagnolo et al 2002 Fig3b
Metabolism, ViswanathanM et al 2005 S2 daf-16
Resveratrol
D2007.5 Aff_D2007.5 P W All gene names: D2007.5; D2007.5.1; D2007.5.2; 3J246;
CE00130; WBGene00017045; WP:CE00130
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster A, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
D2085.4 Aff_D2085.4 P W All gene names: D2085.4; 2I957; CE15744;
WBGene00008429; WP:CE15744
WormBase description: similarity with a human
hypothetical protein (PIR Acc. No. A38919)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
DY3.4 Aff_DY3.4 P W All gene names: trt-1; DY3.4; DY3.4a.1; DY3.4a.2;
DY3.4b.1; DY3.4b.2; DY3.4b.3; DY3.4b.4; DY3.4b.5;
1J347; CE15748; CE27901; CETERT; NM_059972; NM_059973;
WBGene00006618; WP:CE15748; WP:CE27901
WormBase description: trt-1 encodes C. elegans
telomerase reverse transcriptase that affects
fertility, maintenance of telomere length, and
chromosome nondisjunction.
WormBase CDS description: Reverse transcriptase
(RNA-dependent DNA polymerase)
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
E02H1.3 Aff_E02H1.3 P W All gene names: tag-124; E02H1.3; CE01538;
WBGene00006473; WP:CE01538
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: Yeast DEG-1 protein homolog
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
oogenesis enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated
E04F6.3 Aff_E04F6.3 P W All gene names: maoc-1; E04F6.3; 2H487; CE01215;
WBGene00017123; WP:CE01215
WormBase description: E04F6.3 encodes a protein that is
orthologous (with 52% identity over 93% of its length)
to residues 334-609 of human 17-BETA-HYDROXYSTEROID
DEHYDROGENASE IV (HSD17B4; OMIM:601860, mutated in
D-bifunctional protein deficiency), a protein of 736
residues whose N- and C-terminal domains are
orthologous to DHS-28; E04F6.3 contains a MaoC-like
domain, found in diverse enzymes (HSD17B4, peroxisomal
hydratase-dehydrogenase-epimerase, and the fatty acid
synthase beta subunit); E04F6.3 has no obvious function
in mass RNAi assays.
WormBase CDS description:
Hydratase-dehydrogenase-epimerase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S6 removed genes of
contamination
EEED8.7 Aff_EEED8.7 P W All gene names: rsp-4; srp-2; EEED8.7; 2F678; CE01891;
CE27910; CeSC35; NM_062612; NM_062613; WBGene00004701;
WP:CE01891; WP:CE27910
WormBase description: splicing factor SC35
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F02E8.1 Aff_F02E8.1 P W All gene names: asb-2; F02E8.1; F02E8.1.1; F02E8.1.2;
CE07016; NM_076369; WBGene00000207; WP:CE07016; XF89
WormBase description: asb-2 encodes a ATP synthase B
homolog.
WormBase CDS description: ATP synthase B chain
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C
F02E8.5 Aff_F02E8.5 P W All gene names: F02E8.5; CE07020; WBGene00017178;
WP:CE07020; XF78
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, mixed oogenesis soma,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F08B12.2 Aff_F08B12.2 P W All gene names: prx-12; F08B12.2; CE03163; NM_077507;
WBGene00004197; WP:CE03163; XM13
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
F08B6.1 Aff_F08B6.F P W All gene names: F08B6.1; F08B6.F; 1H339; CE39717;
WBGene00017239; WP:CE39717
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
F08B6.2 Aff_F08B6.E P W All gene names: gpc-2; F08B6.2; F08B6.2.1; F08B6.2.2;
F08B6.2.3; 1H335; CE20656; NM_059534; WBGene00001682;
WP:CE20656
WormBase description: gpc-2 encodes one of two C.
elegans heterotrimeric G protein gamma subunits; gpc-2
is required, along with its partner GPB-1, a G protein
beta subunit, for proper mitotic spindle positioning
and orientation during early embryonic cell divisions;
to date, GPC-2 expression has been reported in
electrically excitable cells (all neurons and muscles).
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F08C6.4 Aff_F08C6.4 P W All gene names: sto-1; F08C6.4; CE27924; NM_076880;
WBGene00006063; WP:CE27924; XI183
WormBase description: Erythrocyte band 7 integral
membrane protein (human)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order
F08F1.8 Aff_F08F1.8 P W All gene names: tth-1; F08F1.8; F08F1.8.1; F08F1.8.2;
CE27929; NM_077029; WBGene00006649; WP:CE27929; XJ42
WormBase description: tth-1 encodes a thymosin beta
ortholog that contains four functionally distinct
thymosin beta repeats; in vitro, TTH-1 binds multiple
actin monomers as well as filamentous actin suggesting
that, as its homology predicts, TTH-1 plays a direct
role in regulating actin polymerization and
cytoskeletal organization in C. elegans; consistent
with this, loss of tth-1 activity via a deletion
mutation that removes upstream sequences results in
animals with a dumpy morphology that are sterile as a
result of maternal effect lethality associated with
deformed oocytes containing abnormally distributed
actin; tth-1 mRNA is present throughout development,
while TTH-1 protein is detected in the adult gonad in
the inside edges of the membranous structures
surrounding germline nuclei, the cytoplasm and cortex
of oocytes, early embryos at points of cell contact,
the developing nerve ring, and then throughout the
larval and adult body, with specific enrichment in the
intestine and spermatheca.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F09B9.3 Aff_F09B9.3 P W All gene names: erd-2; F09B9.3; CE23635; ERD2;
NM_077302; WBGene00001331; WP:CE23635; XK776
WormBase description: erd-2 encodes a protein with
homology to human ER lumen protein retaining receptor
1.
WormBase CDS description: ER lumen protein retaining
receptor
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F09C8.2 Aff_F09C8.2 P W All gene names: F09C8.2; F09C8.2.1; F09C8.2.2; CE03178;
WBGene00008622; WP:CE03178; XQ756
F09E10.3 Aff_F09E10.3 P W All gene names: dhs-25; F09E10.3; CE30939; NM_075881;
WBGene00000988; WP:CE30939; XC107
WormBase description: dhs-25 encodes a short-chain
dehydrogenase predicted to be mitochondrial.
WormBase CDS description: short-chain alcohol
dehydrogenase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F09F7.3 Aff_F09F7.3 P W All gene names: F09F7.3; F09F7.3.1; F09F7.3.2; 3G653;
CE30653; WBGene00017300; WP:CE30653
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, oogenesis enriched genes, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F10D2.10 Aff_F10D2.10 P W All gene names: F10D2.10; 5H634; CE32860;
WBGene00017335; WP:CE32860
Member of lists (Publications lists):
Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, GO categories, Reinke et al 2004,
fem3 enriched genes, Wang et al 2003 S4 Early genes,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0
F11A10.7 Aff_F11A10.2 P W All gene names: F11A10.7; 4M851; CE28911;
WBGene00008688; WP:CE28911
F11E6.1 Aff_4R79.3 P W All gene names: F11E6.1; 4S421; CE20669; CE26698;
CE31166; WBGene00008706; WP:CE20669; WP:CE26698;
WP:CE31166
WormBase description: F11E6.1 is homologous to to the
human gene GLUCOCEREBROSIDASE (GBA; OMIM:606463), which
when mutated leads to Gaucher disease.
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, fem3 enriched genes,
Reinke et al 2004, IVb male soma enriched genes, Reinke
et al 2004, mixed sperm soma, ViswanathanM et al 2005
S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 Climbing, Wang et al
2003 S4 genes pass two-wayANOVA P0
F12F6.1 Aff_F12F6.1 P W All gene names: F12F6.1; 4M351; CE34803;
WBGene00008720; WP:CE34803
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, ViswanathanM et al 2005
S2 sir-2.1 regulated
F13B9.5 Aff_F13B9.4 P W All gene names: ksr-1; sar-2; sur-3; F13B9.5;
F13B9.5.1; F13B9.5.2; CE25854; NM_076995;
WBGene00002239; WP:CE25854; XI901
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F13E9.13 Aff_F13E9.3 P W
F13G3.10 Aff_F13G3.10 P W All gene names: F13G3.10; CE17660; NM_059669;
WBGene00008768; WP:CE17660
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F14H12.4 Aff_F14H12.4 P W All gene names: F14H12.4; CE39916; CE39917;
WBGene00017472; WP:CE39916; WP:CE39917; XE961
WormBase description: protein kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F18A1.5 Aff_F18A1.5 P W All gene names: F18A1.5; F18A1.5.1; F18A1.5.2; 2H955;
CE04405; WBGene00017546; WP:CE04405
WormBase description: F18A1.5 encodes the C. elegans
ortholog of the replication protein A (RPA) large
subunit; by homology, the F18A1.5 gene product is
predicted to function as a DNA binding and
oligonucleotide oligosaccharide binding (OB) protein
that is required for DNA replication, repair, and
recombination; large-scale RNAi screens indicate that
the product of F18A1.5 is essential for embryonic
development, and that in yeast two-hybrid assays
interacts with the product of M04F3.1, the RPA medium
subunit; in situ hybridization studies indicate that
F18A1.5 transcripts are expressed in germ cells.
WormBase CDS description: replication factor A
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, GO categories,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F18H3.1 Aff_F18H3.1 P W All gene names: F18H3.1; CE37505; WBGene00008939;
WP:CE37505; XO139
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F19C6.5 Aff_F19C6.5 P W All gene names: F19C6.5; CE01558; WBGene00008954;
WP:CE01558; XK598
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C
F19F10.9 Aff_F19F10.9 P W All gene names: F19F10.9; 5I52; CE27372;
WBGene00017605; WP:CE27372
WormBase description: The F19F10.9 gene encodes a
homolog of the human SART1 gene, which encodes a
protein recognised by IgE that may be involved in
atopic disease.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, list of genes in cluster F, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, ViswanathanM et
al 2005 S2 sir-2.1 regulated
F20A1.1 Aff_F20A1.1 P W All gene names: F20A1.1; 5H533; CE07091;
WBGene00017613; WP:CE07091
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order
F22F7.1 Aff_F22F7.1 P W All gene names: F22F7.1; F22F7.1a.1; F22F7.1a.2; 5C603;
CE17691; CE32871; WBGene00017719; WP:CE17691;
WP:CE32871
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, herm soma
enriched genes, ViswanathanM et al 2005 S2 sir-2.1
regulated
F23A7.4 Aff_F23A7.4 P W All gene names: F23A7.4; CE09578; WBGene00009069;
WP:CE09578; XQ825
WormBase description: glutamate receptor epsilon
subunit like
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F23C8.6 Aff_F23C8.F P W All gene names: phi-24; F23C8.6; F23C8.F; 1C988;
CE20715; WBGene00017735; WP:CE20715
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F23H11.1 Aff_F23H11.1 P W All gene names: bra-2; tag-285; F23H11.1; 3B529;
CE09609; NM_064891; WBGene00017757; WP:CE09609
WormBase description: The bra-2 gene encodes a homolog
of the human BMP receptor-associated molecule (BRAM1),
paralogous to bra-1, that may act upon the SMA-6
TGF-beta signalling pathway
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, Reinke et al 2004, list
of genes in cluster E, ViswanathanM et al 2005 S2
sir-2.1 regulated
F23H11.5 Aff_F23H11.5 P W All gene names: F23H11.5; F23H11.5.1; F23H11.5.2;
F23H11.5.3; 3B528; CE09613; WBGene00000263; WP:CE09613
WormBase description: The bra-2 gene encodes a homolog
of the human BMP receptor-associated molecule (BRAM1),
paralogous to bra-1, that may act upon the SMA-6
TGF-beta signalling pathway.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F26F4.11 Aff_F26F4.11 P W All gene names: F26F4.11; 3G6; CE04448; WBGene00017830;
WP:CE04448
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
F26H11.2 Aff_F26H11.2 P W All gene names: nurf-1; F26H11.2; F26H11.2a.1;
F26H11.2a.2; 2O693; CE15909; CE15910; CE35294; CE35295;
CE35296; CE36931; CE37638; WBGene00009180; WP:CE15909;
WP:CE15910; WP:CE35294; WP:CE35295; WP:CE35296;
WP:CE36931; WP:CE37638
WormBase description: Bromodomain
Member of lists (Publications lists):
Kwon et al 2004 T1 transient-induction
Ethanol-res, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, IVb male soma enriched
genes
F28C6.10 Aff_F28C6.10 P W All gene names: F28C6.10; 2I899; CE09747;
WBGene00009209; WP:CE09747
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, IVb male soma enriched
genes
F28F8.3 Aff_F28F8.3 P W All gene names: lsm-5; F28F8.3; F28F8.3.1; F28F8.3.2;
5Q49; CE09757; NM_074469; WBGene00003079; WP:CE09757
WormBase description: small nuclear ribonucleoprotein E
(SNRNP-E) like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated
F31C3.1 Aff_F31C3.1 P W All gene names: cyn-5; cyp-5; F31C3.1; F31C3.1.1;
F31C3.1.2; 1P632; CE17730; NM_061223; WBGene00000881;
WP:CE17730
WormBase description: cyp-5 encodes a cyclophilin that
is functional in vitro and is predicted to be a
secreted protein that is structurally most similar to
human cyclophilin B; expressed in the intestine.
WormBase CDS description: cyclophillin
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F31D4.1 Aff_F31D4.1 P W All gene names: F31D4.1; 5V311; CE31921;
WBGene00009289; WP:CE31921
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, wt herm vs wt male enriched gen, Reinke et
al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated
F32E10.2 Aff_F32E10.2 P W All gene names: F32E10.2; 4I341; CE04475;
WBGene00017990; WP:CE04475
WormBase description: chromo domain of heterochromatin
protein
Member of lists (Publications lists):
Jiang et al 2001 Fig1
hermaphrodite-enriched TF, Lund et al 2002 Fig3C
Germline-intrinsic, Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, Reinke et al 2004, GO
categories
F33E11.1 Aff_F33E11.1 P W All gene names: nhr-15; F33E11.1; 5A799; CE17759;
NM_070773; WBGene00003614; WP:CE17759
WormBase description: nhr-15 is predicted to encode a
member of the nuclear hormone receptor family.
WormBase CDS description: nuclear hormone receptor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated
F34D10.3 Aff_F34D10.3 P W All gene names: F34D10.3; 3E825; CE00963;
WBGene00009373; WP:CE00963
F36A2.6 Aff_F36A2.6 P W All gene names: rps-15; F36A2.6; F36A2.6.1; F36A2.6.2;
1J392; CE09945; NM_059983; WBGene00004484; WP:CE09945
WormBase description: rps-15 encodes a small ribosomal
subunit S15 protein.
WormBase CDS description: 40S ribosomal protein S15
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F36A2.7 Aff_F36A2.7 P W All gene names: F36A2.7; F36A2.7.1; F36A2.7.2; 1J391;
CE09946; WBGene00009454; WP:CE09946
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F36A4.8 Aff_F36A4.8 P W All gene names: F36A4.8; F36A4.8.1; F36A4.8.2; 4F11;
CE07184; WBGene00018085; WP:CE07184
F37C12.11 Aff_F37C12.11 P W All gene names: rps-21; F37C12.11; F37C12.11.1;
F37C12.11.2; 3I278; CE30779; NM_066178; WBGene00004490;
WP:CE30779
WormBase description: rps-21 encodes a small ribosomal
subunit S21 protein; by homology, RPS-21 is predicted
to function in protein biosynthesis; in C. elegans,
RPS-21 activity is required for embryonic and germline
development, as well as the overall health of the
animal.
WormBase CDS description: Ribosomal protein S21
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F37C12.4 Aff_F37C12.4 P W All gene names: rpl-36; F37C12.4; F37C12.4.1;
F37C12.4.2; F37C12.4.3; 3I271; CE30781; NM_066172;
WBGene00004450; WP:CE30781
WormBase description: rpl-36 encodes a large ribosomal
subunit L36 protein; by homology, RPL-36 is predicted
to function in protein biosynthesis; in C. elegans,
RPL-36 activity is required for embryonic and germline
development and normal postembryonic growth rates.
WormBase CDS description: Ribosomal protein YL39
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F37C12.9 Aff_F37C12.9 P W All gene names: rps-14; F37C12.9; F37C12.9.1;
F37C12.9.2; 3I268; CE00821; NM_066171; WBGene00004483;
WP:CE00821
WormBase description: rps-14 encodes a small ribosomal
subunit S14 protein; by homology, RPS-14 is predicted
to function in protein biosynthesis; in C. elegans,
RPS-14 activity is required for embryonic and germline
development, as well as the overall health of the
animal.
WormBase CDS description: Ribosomal protein S14
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F37E3.1 Aff_F37E3.1 P W All gene names: F37E3.1; 1H1; CE29793; WBGene00018156;
WP:CE29793
WormBase description: CAP-binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
F38A6.1 Aff_F38A6.1 P W All gene names: Ce-fkh-1; fkh-1; pha-4; F38A6.1; 5V229;
CE15998; NM_075605; WBGene00004013; WP:CE15998
WormBase description: Fork head domain, eukaryotic
transcription factors
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
F39B2.6 Aff_F39B2.6 P W All gene names: rps-26; F39B2.6; F39B2.6.1; F39B2.6.2;
1P353; CE16012; NM_061170; WBGene00004495; WP:CE16012
WormBase description: rps-26 encodes a small ribosomal
subunit S26 protein; by homology, RPS-26 is predicted
to function in protein biosynthesis; in C. elegans,
RPS-26 activity is required for embryonic, larval, and
germline development, as well as normal locomotion and
body morphology.
WormBase CDS description: 40S ribosomal protein S26
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F39G3.7 Aff_F39G3.7 P W All gene names: pex-6; prx-6; F39G3.7; 5F194; CE10124;
NM_071867; WBGene00004195; WP:CE10124
WormBase description: ATPase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
F40F11.1 Aff_F40F11.1 P W All gene names: rps-11; F40F11.1; F40F11.1.1;
F40F11.1.2; 4M367; CE05860; NM_069785; WBGene00004480;
WP:CE05860
WormBase description: rps-11 encodes a small ribosomal
subunit S11 protein; by homology, RPS-11 is predicted
to function in protein biosynthesis; in C. elegans,
RPS-11 activity is required for embryonic and germline
development, as well as the overall health of the
animal.
WormBase CDS description: ribosomal protein S11
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F40F8.10 Aff_F40F8.10 P W All gene names: rps-9; F40F8.10; F40F8.10.1;
F40F8.10.2; F40F8.10.3; 2L416; CE05849; NM_063983;
WBGene00004478; WP:CE05849
WormBase description: rps-9 encodes a small ribosomal
subunit S9 protein.
WormBase CDS description: ribosomal protein S9
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F42C5.8 Aff_F42C5.8 P W All gene names: rps-8; F42C5.8; F42C5.8.1; F42C5.8.2;
4I78; CE04561; NM_068766; WBGene00004477; WP:CE04561
WormBase description: rps-8 encodes a small ribosomal
subunit S8 protein; by homology, RPS-8 is predicted to
function in protein biosynthesis; in C. elegans, RPS-8
activity is required for germline development and the
overall health of the animal.
WormBase CDS description: 40S ribosomal protein S8
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
F42G2.6 Aff_F42G2.6 P W All gene names: F42G2.6; 2C718; CE32659;
WBGene00018355; WP:CE32659
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, Reinke et al 2004, GO
categories, Reinke et al 2004, IVb male soma enriched
genes, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F42G9.2 Aff_F42G9.2 P W All gene names: cyn-6; cyp-6; F42G9.2; 3B391; CE01301;
NM_064856; WBGene00000882; WP:CE01301
WormBase description: cyp-6 encodes a cyclophilin most
similar to human secreted cyclophilin type B isoforms
that is functional when expressed in E. coli; it is
expressed in the intestine.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
F44F1.6 Aff_F44F1.6 P W All gene names: F44F1.6; 1N854; CE23728; CE23729;
WBGene00009698; WP:CE23728; WP:CE23729
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
F45H10.4 Aff_F45H10.4 P W All gene names: drr-1; F45H10.4; 2N786; CE10548;
WBGene00009741; WP:CE10548
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
F47A4.2 Aff_F47A4.2 P W All gene names: dpy-22; mdt-12; psa-6; sop-1; F47A4.2;
CE16058; NM_077244; WBGene00001081; WP:CE16058; XK430
WormBase description: dpy-22 encodes a broadly
expressed protein, homologous to the human
transcriptional mediator protein TRAP230, which is
involved in WNT and RAS signaling, as well as in dosage
compensation; DPY-22 has a C-terminal glutamine-rich
domain that is dispensable for inhibition of
RAS-dependent cell differentiation, but is required for
inhibition of BAR-1-dependent gene expression.
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen
F47D12.6 Aff_F47D12.6 P W All gene names: F47D12.6; 3H376; CE01950;
WBGene00018562; WP:CE01950
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, Wang et al 2003 S4 Early genes, Wang et al 2003
S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F48E3.6 Aff_F48E3.6 P W All gene names: F48E3.6; CE02753; WBGene00018606;
WP:CE02753; XI120
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster E
F49C12.9 Aff_F49C12.9 P W All gene names: F49C12.9; 4K80; CE10780;
WBGene00009878; WP:CE10780
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated
F52B5.6 Aff_F52B5.6 P W All gene names: rpl-25.2; F52B5.6; F52B5.6.1;
F52B5.6.2; 1I906; CE05721; NM_059862; WBGene00004439;
WP:CE05721
WormBase description: rpl-25.2 encodes a large
ribosomal subunit L23a protein.
WormBase CDS description: 60S ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, Fig2b shared gemlines, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, intrinsic, Reinke et al 2004, wt vs glp-4
enriched genes, Reinke et al 2004, wt males vs glp4
male enriched , Romagnolo et al 2002 Fig3b Protein
Synthesis, ViswanathanM et al 2005 S2 sir-2.1
regulated
F52H3.3 Aff_F52H3.3 P W All gene names: bath-38; F52H3.3; 2K334; CE03399;
WBGene00009945; WP:CE03399
WormBase description: BTB (also known as BR-C/Ttk)
domain.
F53B7.3 Aff_F53B7.3 P W All gene names: F53B7.3; 5L480; CE05922;
WBGene00009966; WP:CE05922
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, ViswanathanM et al 2005 S2
sir-2.1 regulated
F53C11.3 Aff_F53C11.3 P W All gene names: F53C11.3; 5O263; CE10908;
WBGene00009973; WP:CE10908
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: 2,4-dienoyl-CoA reductase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F53F10.2 Aff_F53F10.2 P W All gene names: F53F10.2; F53F10.2a.1; F53F10.2a.2;
F53F10.2a.3; F53F10.2b.1; F53F10.2b.2; F53F10.2b.3;
F53F10.2b.4; 1E401; CE10982; CE30374; WBGene00018764;
WP:CE10982; WP:CE30374
WormBase description: decarbaxylase
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F53G12.10 Aff_F53G12.10 P W All gene names: rpl-7; F53G12.10; F53G12.10.1;
F53G12.10.2; 1A583; CE11024; NM_058275; WBGene00004418;
WP:CE11024
WormBase description: rpl-7 encodes a large ribosomal
subunit L7 protein required in mass RNAi assays for
embryonic viability and normally rapid growth.
WormBase CDS description: ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F53H1.1 Aff_Y104H12B_374.A P W All gene names: F53H1.1; 4C62; CE27427; WBGene00018776;
WP:CE27427
WormBase description: helicase
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
F54B11.6 Aff_F54B11.6 P W All gene names: bra-1; F54B11.6; CE05930; NM_077876;
WBGene00000262; WBGene00010029; WP:CE05930; XO217
WormBase description: The bra-1 gene encodes a homolog
of the human BMP receptor-associated molecule (BRAM1)
that negatively regulates the DAF-1/DAF-7/DAF-14
TGF-beta signalling pathway.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
F54E12.2 Aff_F54E12.2 P W All gene names: F54E12.2; F54E12.2.1; F54E12.2.2; 4M98;
CE11083; WBGene00010061; WP:CE11083
WormBase description: helicase
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
F54E7.2 Aff_F54E7.2 P W All gene names: rps-12; F54E7.2; F54E7.2.1; F54E7.2.2;
3G769; CE26896; NM_065820; WBGene00004481; WP:CE26896
WormBase description: rps-12 encodes a small ribosomal
subunit S12 protein; by homology, RPS-12 is predicted
to function in protein biosynthesis; in C. elegans,
RPS-12 activity is required for embryonic and germline
development, normal movement, and the overall health of
the animal.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
F55A8.1 Aff_F55A8.1 P W All gene names: egl-18; elt-5; pvl-3; F55A8.1;
F55A8.1.1; F55A8.1.2; F55A8.1.3; 4C681; CE28339;
NM_067742; WBGene00001186; WP:CE28339
WormBase description: egl-18 encodes a member of the
GATA-family of transcription factors that affects cell
migration, cell fate specification; expressed in the
head, in hypodermal seam cells, VC neurons, and vulval
precursor cells.
WormBase CDS description: zinc finger protein
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, list of genes in cluster E, ViswanathanM et
al 2005 S2 sir-2.1 regulated
F55B11.1 Aff_F55B11.1 P W All gene names: F55B11.1; 4P166; CE16116;
WBGene00010083; WP:CE16116
WormBase description: The F55B11.1 gene encodes an
ortholog of the human gene XANTHINE DEHYDROGENASE
(XDH), which when mutated leads to xanthinuria
(OMIM:278300).
WormBase CDS description: xanthine dehydrogenase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated
F56A6.2 Aff_F56A6.2 P W All gene names: hum-7; F56A6.2; 1B60; CE23779;
NM_058354; WBGene00002040; WP:CE23779
WormBase description: hum-7 encodes a class IX
unconventional myosin heavy chain that contains a
myosin motor domain in the head region and zinc-finger
and rhoGAP (rho GTPase activating protein) domains in
the tail region; HUM-7 is required during embryogenesis
for cytokinesis and normal cytoplasmic rearrangements,
and by homology, may function in organization of the
actin cytoskeleton; the precise expression and
localization patterns of HUM-7 are not yet known.
WormBase CDS description: myosin
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F56A6.4 Aff_Y65B4A_175.A P W All gene names: F56A6.4; 1B88; CE34319; WBGene00018923;
WP:CE34319
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
F57B10.10 Aff_F57B10.10 P W All gene names: dad-1; F57B10.10; F57B10.10.1;
F57B10.10.2; 1H132; CE11316; NM_059488; WBGene00000896;
WP:CE11316
WormBase description: dad-1 encodes an ortholog of
human DAD1 (OMIM:600243) that inhibits cell death and
can functionally complement the hamster protein in
cultured cells.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F57B10.8 Aff_F57B10.8 P W All gene names: F57B10.8; 1H124; CE11312;
WBGene00019005; WP:CE11312
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S8 SAGE genes in
the dauer exit, Wang et al 2003 S7 SAGE genes in the
dataset
F57F4.3 Aff_F57F4.3 P W All gene names: gfi-1; F57F4.3; 5G882; CE11342;
NM_072225; WBGene00001581; WP:CE11342
WormBase description: gfi-1 encodes a protein that
contains 21 ET modules; interacts with unc-68 in yeast
two-hybrid assays.
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, list
of genes in cluster C
F58B3.4 Aff_F58B3.4 P W All gene names: F58B3.4; 4M394; CE36170;
WBGene00010231; WP:CE36170
Member of lists (Publications lists):
Lund et al 2002 Fig3C
Germline-intrinsic, McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Romagnolo et
al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2
sir-2.1 regulated
F59A6.6 Aff_F59A6.6 P W All gene names: rnh-1; F59A6.6; F59A6.6b.1; F59A6.6b.2;
2F287; CE33406; CE33659; NM_062519; NM_182182;
WBGene00004382; WP:CE33406; WP:CE33659
WormBase description: rnh-1 encodes a putative RNAse H
that is predicted, by phylogenetic profiling, to be
mitochondrial.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
H06I04.4 Aff_Y53G8B_1025.B P W All gene names: ubl-1; H06I04.4; H06I04.4a.1;
H06I04.4a.2; H06I04.4a.3; H06I04.4b.1; H06I04.4b.2;
3E159; CE20938; CE31022; NM_171089; WBGene00006725;
WP:CE20938; WP:CE31022
WormBase description: ubl-1 encodes a protein similar
to Drosophila ubiquitin/ ribosomal protein S27a that
affects body length, fertility, and larval viability.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
H24K24.5 Aff_H24K24.B P W All gene names: fmo-15; fmo-5; H24K24.5; 5B378;
CE20989; NM_070951; WBGene00001480; WP:CE20989
WormBase description: fmo-15 encodes a
flavin-containing monooxygenase (FMO) homologous to
various human FMOs mutated in trimethylaminuria
(OMIM:602079).
WormBase CDS description: flavin-containing
monooxygenase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, Romagnolo et al 2002 Fig3b Unkown,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Dauer Enriched, Wang et al 2003 S4 genes pass
two-wayANOVA P0
K01G5.8 Aff_K01G5.8 P W All gene names: K01G5.8; K01G5.8a.1; K01G5.8a.2; 3L830;
CE16198; CE16199; WBGene00010479; WP:CE16198;
WP:CE16199
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
K02B2.5 Aff_K02B2.5 P W All gene names: rps-25; K02B2.5; K02B2.5.1; K02B2.5.2;
4G712; CE04691; NM_068494; WBGene00004494; WP:CE04691
WormBase description: rps-25 encodes a small ribosomal
subunit S25 protein.
WormBase CDS description: ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
K02E7.6 Aff_K02E7.6 P W All gene names: K02E7.6; K02E7.6.1; K02E7.6.2; 2B349;
CE33417; WBGene00019311; WP:CE33417
Member of lists (Publications lists):
Reinke et al 2004, IVb male soma
enriched genes, Shen et al 2005 T1 hif-1 depend
hypoxia, ViswanathanM et al 2005 S2 sir-2.1 regulated
K02F3.4 Aff_K02F3.4 P W All gene names: zip-2; K02F3.4; K02F3.4.1; K02F3.4.2;
3B453; CE23848; WBGene00019327; WP:CE23848
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
K03B4.7 Aff_K03B4.7 P W All gene names: K03B4.7; K03B4.7a.1; K03B4.7a.2; 5F170;
CE28581; CE33133; WBGene00019357; WP:CE28581;
WP:CE33133
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, IVb male soma enriched genes, Romagnolo et
al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0, Wang et al 2003 S4 Dauer Enriched
K03H1.7 Aff_K03H1.7 P W All gene names: K03H1.7; 3L37; CE00573; WBGene00010542;
WP:CE00573
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
K04C2.2 Aff_K04C2.2 P W All gene names: K04C2.2; 3H983; CE00722;
WBGene00019380; WP:CE00722
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, wt herm vs wt male enriched gen, Wang et al 2003
S5 genes common to feeding ANOVA, Wang et al 2003 S3
genes pass one-way ANOVA
K04D7.3 Aff_K04D7.3 P W All gene names: gta-1; K04D7.3; 4K947; CE06092;
NM_069461; WBGene00001794; WP:CE06092
WormBase description: The gta-1 gene encodes an
ortholog of the human gene GABAT, which when mutated
leads to GABA-transaminase deficiency (OMIM:137150).
WormBase CDS description: 4-aminobutyrate
aminotransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
K07A1.11 Aff_K07A1.11 P W All gene names: rba-1; K07A1.11; 1K194; CE11860;
NM_060150; WBGene00004312; WP:CE11860
WormBase description: retinablastoma-binding protein
RBAP46 like
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
K07A1.12 Aff_K07A1.12 P W All gene names: lin-53; rba-2; K07A1.12; K07A1.12.1;
K07A1.12.2; 1K196; CE16234; NM_060151; WBGene00003036;
WP:CE16234
WormBase description: chromatin assembly factor 1 P55
subunit like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated
K07C5.6 Aff_K07C5.6 P W All gene names: K07C5.6; K07C5.6.1; K07C5.6.2; 5K834;
CE06116; WBGene00010629; WP:CE06116
WormBase description: Zinc finger, CCHC class
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt herm vs wt
male enriched gen, Reinke et al 2004, GO categories,
ViswanathanM et al 2005 S2 sir-2.1 regulated
K08D10.3 Aff_K08D10.3 P W All gene names: rnp-3; K08D10.3; 4E939; CE07355;
NM_068104; WBGene00004386; WP:CE07355
WormBase description: U1 small nuclear
ribonucleoprotein A
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO
categories, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
K08E3.8 Aff_K08E3.8 P W All gene names: mdt-29; K08E3.8; K08E3.8.1; K08E3.8.2;
3O867; CE18874; NM_067446; WBGene00007025; WP:CE18874
WormBase description: mdt-29 encodes a putative
mediator subunit with a prion-like (asparagine- or
glutamine-rich) domain; note that K08E3.8 is allegedly
an ortholog of Drosophila INTERSEX/IX, but the actual
C. elegans IX ortholog appears to be PQN-15); in yeast
two-hybrid screens, MDT-29 interacts with SEL-7 and
SEL-8; MDT-29 protein also self-associates; RNAi of
K08E3.8 weakly enhances the two-anchor-cell phenotype
of lin-12(ar170), roughly as much as sel-7 RNAi; since
SEL-7 is a novel nuclear protein, MDT-29/SEL-7/SEL-8 is
likely to form a nuclear complex formed in response to
LIN-12 activation.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
K08H2.1 Aff_K08H2.1 P W All gene names: skr-21; K08H2.1; CE06159; NM_077793;
WBGene00004827; WP:CE06159; XN844
WormBase description: The skr-21 gene encodes a homolog
of Skp1 in S. cerevisiae that has no known function in
vivo, since skr-21(RNAi) animals are at least
superficially normal.
WormBase CDS description: RNA polymerase II elongation
factor like
K11H12.2 Aff_K11H12.2 P W All gene names: rpl-15; K11H12.2; K11H12.2.1;
K11H12.2.2; K11H12.2.3; K11H12.2.4; 4B406; CE12148;
NM_067563; WBGene00004427; WP:CE12148
WormBase description: rpl-15 encodes a large ribosomal
subunit L15 protein.
WormBase CDS description: 60S ribosomal protein L15
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
K12C11.2 Aff_K12C11.2 P W All gene names: smo-1; K12C11.2; 1B815; CE18056;
NM_058441; SMT3; WBGene00004888; WP:CE18056
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
K12H4.3 Aff_K12H4.3 P W All gene names: K12H4.3; 3J135; CE00268;
WBGene00019678; WP:CE00268
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated, Wang et al 2003 S5 genes common
to feeding ANOVA, Wang et al 2003 S3 genes pass
one-way ANOVA
M01F1.2 Aff_M01F1.2 P W All gene names: rpl-16; M01F1.2; M01F1.2.1; M01F1.2.2;
3E592; CE01030; NM_065320; WBGene00004428; WP:CE01030
WormBase description: rpl-16 encodes a large ribosomal
subunit L13a protein.
WormBase CDS description: L13P family ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
R02F11.4 Aff_R02F11.4 P W All gene names: R02F11.4; 5F290; CE12502;
WBGene00019842; WP:CE12502
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated
R03E1.2 Aff_R03E1.2 P W All gene names: R03E1.2; R03E1.2.1; R03E1.2.2; CE18902;
WBGene00010993; WP:CE18902; XO782
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
R05D11.7 Aff_R05D11.7 P W All gene names: R05D11.7; 1J179; CE06242;
WBGene00011035; WP:CE06242
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, oogenesis enriched genes,
ViswanathanM et al 2005 S2 sir-2.1 regulated
R05H5.3 Aff_R05H5.3 P W All gene names: R05H5.3; 2K489; CE02290;
WBGene00011038; WP:CE02290
WormBase description: thioredoxin
Member of lists (Publications lists):
Golden et al 2004, N2 vs daf-2
different genes at , Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, GO categories, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
R06A4.8 Aff_R06A4.8 P W All gene names: R06A4.8; 2O638; CE18115;
WBGene00011050; WP:CE18115
WormBase description: R06A4.8 is orthologous to the
human gene GLYCOGEN DEBRANCHING ENZYME ISOFORM 6 (AGL;
OMIM:232400), which when mutated leads to glycogen
storage disease, type III.
WormBase CDS description: Alpha amylase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, mixed oogenesis soma, ViswanathanM et al
2005 S2 daf-16 Resveratrol
R07G3.3 Aff_R07G3.3 P W All gene names: npp-21; R07G3.3; 2H897; CE37543;
CE37544; WBGene00019940; WP:CE37543; WP:CE37544
WormBase description: myosin heavy chain
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
R09B3.5 Aff_R09B3.5 P W All gene names: mag-1; R09B3.5; R09B3.5.1; R09B3.5.2;
1M504; CE16310; NM_060624; WBGene00003123; WP:CE16310
WormBase description: MAGO NASHI PROTEIN
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, ViswanathanM et al 2005 S2
sir-2.1 regulated
R11D1.8 Aff_R11D1.8 P W All gene names: rpl-28; R11D1.8; R11D1.8.1; R11D1.8.2;
R11D1.8.3; R11D1.8.4; R11D1.8.5; 5N208; CE06313;
NM_073779; WBGene00004442; WP:CE06313
WormBase description: rpl-28 encodes a large ribosomal
subunit L28 protein.
WormBase CDS description: ribsomal protein L28 like
R11E3.6 Aff_R11E3.6 P W All gene names: eor-1; R11E3.6; R11E3.6.1; R11E3.6.2;
R11E3.6.3; 4F558; CE19548; NM_068244; WBGene00001324;
WP:CE19548
WormBase description: eor-1 encodes an ortholog of the
human BTB/zinc-finger transcription factor PLZF
(OMIM:176797), which is is found as a retinoic acid
receptor alpha (RARA) fusion in acute promyelocytic
leukemia (APL); EOR-1 positively regulates
RAS/RAF-mediated signalling during excretory system
development, as well as RAS/RAF- and WNT-mediated
signalling during P12 fate specification; EOR-1 may
function with EOR-2 and Hox genes to control the
expression of Ras- and Wnt-responsive genes.
WormBase CDS description: zinc-finger protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster F, Reinke et al 2004, fem1 enriched genes,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, oogenesis enriched genes, Reinke et al 2004,
wt herm vs wt male enriched gen, ViswanathanM et al
2005 S2 daf-16 Resveratrol
R12H7.3 Aff_R12H7.3 P W All gene names: skr-19; R12H7.3; CE03568; NM_077792;
WBGene00004825; WP:CE03568; XN842
WormBase description: The skr-19 gene encodes a homolog
of Skp1 in S. cerevisiae that has no known function in
vivo, since skr-19(RNAi) animals are at least
superficially normal.
WormBase CDS description: RNA polymerase II elongation
factor like
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
R13F6.1 Aff_R13F6.1 P W All gene names: kbp-1; R13F6.1; 3H959; CE00720;
NM_066094; WBGene00020064; WP:CE00720
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, wt vs glp-4 enriched genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, oogenesis enriched genes, Reinke et
al 2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
R151.3 Aff_R151.3 P W All gene names: rpl-6; R151.3; R151.3.1; R151.3.2;
3I299; CE00744; NM_066183; WBGene00004417; WP:CE00744
WormBase description: rpl-6 encodes a large ribosomal
subunit L6 protein.
WormBase CDS description: Ribosomal protein ML16
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster C,
ViswanathanM et al 2005 S2 sir-2.1 regulated
R151.9 Aff_R151.9 P W All gene names: R151.9; 3H288; 3I288; CE00827;
WBGene00020112; WP:CE00827
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
T01B11.2 Aff_T01B11.2 P W All gene names: T01B11.2; 4J214; CE12894; CE33686;
WBGene00020139; WP:CE12894; WP:CE33686
WormBase description: aminotransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Murphy et al 2003 Fig2 Class1
elongate lifespan, Reinke et al 2004, fem3 enriched
genes, Reinke et al 2004, mixed sperm soma, Reinke et
al 2004, GO categories, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 Early genes, Wang et
al 2003 S4 genes pass two-wayANOVA P0
T02G5.7 Aff_T02G5.7 P W All gene names: T02G5.7; CE04859; NM_063055;
WBGene00020166; WP:CE04859
WormBase description: The T02G5.7 gene encodes a
homolog of the human gene ACAT1, which when mutated
leads to alpha-methylacetoaceticaciduria (OMIM:203750).
WormBase CDS description: acetoacetyl CoA thiolase
Member of lists (Publications lists):
ReichertK et al 2005 T3 xenobiotic
downregulated, Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, GO categories, ViswanathanM
et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 Climbing,
Wang et al 2003 S4 genes pass two-wayANOVA P0
T03F6.1 Aff_T03F6.1 P W All gene names: qdpr-1; T03F6.1; 3O483; CE16335;
WBGene00011398; WP:CE16335
WormBase description: The T03F6.1 gene encodes an
ortholog of the human gene QUINOID DIHYDROPTERIDINE
REDUCTASE (QDPR; DHPR), which when mutated leads to
phenylketonuria II (OMIM:261630).
WormBase CDS description: Alcohol/other dehydrogenases,
short chain type
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Murphy et al 2003 Fig2 Class2
shorten lifespan, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
T04C10.1 Aff_T04C10.1 P W All gene names: mbk-1; T04C10.1; CE33442; NM_078059;
WBGene00003149; WP:CE33442; XP440
WormBase description: mbk-1 encodes a putative
dual-specificity kinase (predicted to have both
serine/threonine and tyrosine substrates) that is
orthologous to Drosophila MINIBRAIN and mammalian
DYRK1A/MnbK and that has a glutamine/asparagine-rich
domain; MBK-1 is found in most or all nuclei, is
dispensable for viability, and perturbs olfaction in
AWC when overexpressed.
WormBase CDS description: serine/threonine kinase (2
domains)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph
T04C12.5 Aff_T04C12.5 P W All gene names: act-2; T04C12.5; 5L558; CE13150;
NM_073417; WBGene00000064; WP:CE13150; act2
WormBase description: act-2 encodes an invertebrate
actin that may function specifically in the pharynx.
WormBase CDS description: actin
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
T05E11.1 Aff_T05E11.1 P W All gene names: rps-5; T05E11.1; T05E11.1.1;
T05E11.1.2; 4L874; CE06360; NM_069676; WBGene00004474;
WP:CE06360
WormBase description: rps-5 encodes a small ribosomal
subunit S5 protein.
WormBase CDS description: 40S ribosomal protein S5
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
T05F1.3 Aff_T05F1.3 P W All gene names: rps-19; T05F1.3; T05F1.3.1; T05F1.3.2;
1K202; CE13265; NM_060154; WBGene00004488; WP:CE13265;
rpS19
WormBase description: rps-19 encodes a small ribosomal
subunit S19 protein, orthologous to human RPS19
(OMIM:603474, mutated in Diamond-Blackfan anemia).
WormBase CDS description: Ribosomal protein S19e
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
T06E4.3 Aff_T06E4.3 P W All gene names: Ce-atl1; atl-1; T06E4.3; 5K116;
CE25103; CE28250; NM_073086; WBGene00000226;
WP:CE25103; WP:CE28250
WormBase description: The atl-1 gene encodes a large,
2514-residue protein of the ATM family, homologous to
human AT (OMIM:208900, mutated in ataxia
telangiectasia); the C-terminal sequence of ATL-1
contains a PI-3 kinase-like domain; ATL-1 is required
for survival through early embryogenesis and normal
chromosomal segregation; atl-1 is expressed in both the
mitotic and meiotic cells of adult gonads.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes
T06E6.2 Aff_T06E6.2 P W All gene names: cyb-2; cyb-3; T06E6.2; T06E6.2a.1;
T06E6.2a.2; 5P877; CE13315; CE27776; NM_074424;
WBGene00000868; WP:CE13315; WP:CE27776
WormBase description: cyb-3 encodes a member of the
cyclin B family that is required for embryonic
viability, and may be involved with sister chromatid
segregation.
Member of lists (Publications lists):
Jiang et al 2001 Fig2 cyclin-genes,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, Fig2b shared gemlines, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, oogenesis
enriched genes, Reinke et al 2004, wt males vs glp4
male enriched , Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated
T07A9.10 Aff_T07A9.10 P W All gene names: T07A9.10; 4B145; CE17219;
WBGene00020298; WP:CE17219
WormBase description: acetylcholine regulator
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male
enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
T07C4.2 Aff_T07C4.2 P W All gene names: tbx-8; T07C4.2; 3L437; CE36891;
NM_066886; WBGene00006545; WP:CE36891
WormBase description: Brachyury
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes
T07C4.4 Aff_T07C4.4 P W All gene names: spp-1; T07C4.4; T07C4.4.1; T07C4.4.2;
3L444; CE35363; NM_066889; WBGene00004986; WP:CE35363
WormBase description: spp-1 encodes a predicted
transmembrane protein containing a saposin (B) domain
that is a member of a saposin-like protein superfamily
containing mammalian NK-lysin and granulysin and the
protozoan amoebapores; SPP-1 is predicted to function
as a lipid-binding protein with cytotoxic, pore-forming
activity, and in vitro, does exhibit antibacterial
activity; loss of SPP-1 function via RNA-mediated
interference (RNAi) does not, however, result in any
abnormalities.
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
T07C4.6 Aff_T07C4.6 P W All gene names: tbx-9; T07C4.6; T07C4.6.1; T07C4.6.2;
3L430; CE36892; NM_066885; WBGene00006546; WP:CE36892
WormBase description: Brachyury
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, list of genes in cluster E
T07C4.9 Aff_T07C4.9 P W All gene names: nex-2; T07C4.9; T07C4.9b.1; T07C4.9b.2;
3L416; CE23956; CE35364; WBGene00003589; WP:CE23956;
WP:CE35364
WormBase description: nex-2 encodes an annexin, a
member of a family of calcium-dependent phospholipid
binding proteins; by homology, NEX-2 could function in
a number of processes, such as membrane fusion,
cytoskeletal interactions, and intracellular signaling;
however, as loss of nex-2 function via RNA-mediated
interference (RNAi) does not result in any
abnormalities, the precise role of NEX-2 in C. elegans
development and/or behavior is not yet known.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, mixed sperm
soma, Reinke et al 2004, fem3 enriched genes, Reinke et
al 2004, IVb male soma enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
T10C6.5 Aff_T10C6.5 P W All gene names: T10C6.5; 5Q503; CE16380;
WBGene00011687; WP:CE16380
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, intrinsic,
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated
T12D8.1 Aff_T12D8.1 P W All gene names: tag-350; T12D8.1; 3O745; CE16398;
WBGene00011729; WP:CE16398
WormBase description: PHD-finger. (2 domains), SET
domain
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster F, Reinke et al 2004, list of genes in
cluster order
T13A10.11 Aff_T13A10.11 P W All gene names: tag-32; T13A10.11; T13A10.11a.1;
T13A10.11a.2; 4H42; CE30175; CE31726; WBGene00006416;
WBGene00020470; WP:CE30175; WP:CE31726
WormBase description: S-adenosylmethionine synthetase
Member of lists (Publications lists):
Reinke et al 2004, wt vs glp-4
enriched genes, Reinke et al 2004, wt males vs glp4
male enriched , Reinke et al 2004, spermatogenesis
enriched genes, Reinke et al 2004, fem3 enriched genes,
Reinke et al 2004, shared sperm, ViswanathanM et al
2005 S2 sir-2.1 regulated
T13F2.7 Aff_T13F2.7 P W All gene names: T13F2.7; 4K540; CE13631;
WBGene00011747; WP:CE13631
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, wt herm vs wt male enriched gen, Reinke et al
2004, list of genes in cluster E, ViswanathanM et al
2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2
daf-16 Resveratrol
T20B12.8 Aff_T20B12.8 P W All gene names: hmg-4; T20B12.8; 3I470; CE01414;
NM_066232; WBGene00001974; WP:CE01414
WormBase description: hmg-4 encodes a protein with
strong similarity to the highly conserved high mobility
group protein SSRP1 (structure-specific DNA recognition
protein); by homology, HMG-4 is predicted to be a
member of the FACT (facilitates chromatin
transcription) complex that functions as a
transcription elongation factor; RNAi experiments
indicate that hmg-4 is required for locomotion and
larval development, and required redundantly with
hmg-3, its paralog, for embryonic development.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, Reinke et al 2004, list of genes
in cluster E, ViswanathanM et al 2005 S2 sir-2.1
regulated
T22C1.11 Aff_T22C1.11 P W All gene names: T22C1.11; 1I544; CE24001;
WBGene00011920; WP:CE24001
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1
regulated
T22D1.11 Aff_T22D1.11 P W All gene names: T22D1.11; 4H692; CE17255;
WBGene00020688; WP:CE17255
WormBase description: carboxyesterase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster C, Reinke et al 2004, herm soma enriched genes,
Wang et al 2003 S4 TransientList, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
T23G7.3 Aff_T23G7.3 P W All gene names: T23G7.3; 2J456; CE03704;
WBGene00011966; WP:CE03704
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Murphy et al 2003 Fig2 Class1
elongate lifespan, Reinke et al 2004, wt herm vs wt
male enriched gen, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
T24B8.1 Aff_T24B8.1 P W All gene names: rpl-32; T24B8.1; T24B8.1.1; T24B8.1.2;
T24B8.1.3; T24B8.1.4; 2J346; CE03709; NM_063533;
WBGene00004446; WP:CE03709
WormBase description: rpl-32 encodes a large ribosomal
subunit L32 protein.
WormBase CDS description: 60S ribosomal protein L32
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph
T24C4.1 Aff_T24C4.1 P W All gene names: T24C4.1; 3B499; CE19592;
WBGene00020757; WP:CE19592
WormBase description: T24C4.1 encodes an
ubiquinol-cytochrome C reductase complex core protein 2
ortholog, predicted by Eisenberg and coworkers to be
mitochondrial, and required for germline maintenance in
mass RNAi assays.
WormBase CDS description: Ubiquinol-cytochrome C
reductase complex core protein 2
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, Fig2b shared gemlines,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs
glp-4 enriched genes, Reinke et al 2004, wt males vs
glp4 male enriched , Reinke et al 2004, GO categories,
Reinke et al 2004, list of genes in cluster E,
ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated
T27F2.1 Aff_T27F2.1 P W All gene names: skp-1; T27F2.1; T27F2.1.1; T27F2.1.2;
5M129; CE06519; NM_073549; WBGene00004806; WP:CE06519
WormBase description: Drosophila puff specific protein
BX42 like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster F,
Reinke et al 2004, fem1 enriched genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, oogenesis enriched genes, Reinke et al 2004, wt
vs glp-4 enriched genes, Reinke et al 2004, wt herm vs
wt male enriched gen, ViswanathanM et al 2005 S2
sir-2.1 regulated
T28C6.3 Aff_T28C6.3 P W All gene names: T28C6.3; 4J585; CE03748;
WBGene00012119; WP:CE03748
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 daf-16
Resveratrol
W01B11.3 Aff_W01B11.3 P W All gene names: W01B11.3; 1D835; CE18307;
WBGene00020915; WP:CE18307
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Wang et al 2003 S5
genes common to feeding ANOVA, Wang et al 2003 S3
genes pass one-way ANOVA
W03D8.2 Aff_W03D8.2 P W All gene names: W03D8.2; 1D368; CE18322;
WBGene00020985; WP:CE18322
WormBase description: ser/thr protein phosphatase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, GO categories, Reinke et al 2004,
list of genes in cluster D, Reinke et al 2004, fem3
enriched genes
W05G11.2 Aff_W05G11.2 P W All gene names: W05G11.2; 3A675; CE39797;
WBGene00021040; WP:CE39797
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, list of genes in cluster F, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004,
list of genes in cluster order, Reinke et al 2004, wt
herm vs wt male enriched gen, ViswanathanM et al 2005
S2 sir-2.1 regulated
W06E11.2 Aff_W06E11.2 P W All gene names: W06E11.2; 3B259; CE01427;
WBGene00021062; WP:CE01427
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke
et al 2004, wt vs glp-4 enriched genes, ViswanathanM et
al 2005 S2 sir-2.1 regulated
W07E6.2 Aff_W07E6.2 P W All gene names: W07E6.2; 2A772; CE17294;
WBGene00021074; WP:CE17294
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, intrinsic, Reinke et al
2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO
categories, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
W08D2.4 Aff_W08D2.4 P W All gene names: fat-3; W08D2.4; 4K569; CE25153;
NM_069351; WBGene00001395; WP:CE25153
WormBase description: The fat-3 gene encodes a delta-6
fatty acid desaturase ('linoleoyl-CoA desaturase')
containing an N-terminal cytochrome b5 domain; FAT-3
expressed in yeast uses linoleic and alpha-linolenic
acid as substrates; FAT-3 is absolutely required in
vivo for synthesis of delta-6 fatty acids, and also
required for fully normal synthesis of C20 fatty acids;
FAT-3 is required for a normally fast growth rate and
movement speed, and for normal defecation rhythms and
fertility.
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1
elongate lifespan, Reinke et al 2004, list of genes in
cluster A, Reinke et al 2004, list of genes in cluster
order, ViswanathanM et al 2005 S2 sir-2.1 regulated
W09C2.1 Aff_W09C2.1 P W All gene names: elt-1; W09C2.1; W09C2.1a.1; W09C2.1a.2;
4K383; CE03799; CE39113; NM_069307; WBGene00001249;
WP:CE03799; WP:CE39113
WormBase description: The elt-1 gene encodes a GATA
transcription factor expressed in the embryonic
hypodermis, and is essential for the production of most
hypodermal cells.
WormBase CDS description: elongation factor ELT
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes,
McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, mixed sperm soma, Reinke et al 2004,
fem3 enriched genes
